KEGG   Sinocyclocheilus anshuiensis: 107685698
Entry
107685698         CDS       T04917                                 
Name
(RefSeq) symplekin-like isoform X1
  KO
K06100  symplekin
Organism
sanh  Sinocyclocheilus anshuiensis
Pathway
sanh03015  mRNA surveillance pathway
sanh04530  Tight junction
Brite
KEGG Orthology (KO) [BR:sanh00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    107685698
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    107685698
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sanh03021]
    107685698
   03019 Messenger RNA biogenesis [BR:sanh03019]
    107685698
Transcription machinery [BR:sanh03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     107685698
Messenger RNA biogenesis [BR:sanh03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     107685698
    U7-dependent histone pre-mRNA processing factors
     107685698
SSDB
Motif
Pfam: Symplekin_C SYMPK_PTA1_N GNC1_N Cohesin_HEAT Adaptin_N Rep_Org_C
Other DBs
NCBI-GeneID: 107685698
NCBI-ProteinID: XP_016337871
UniProt: A0A671P433
LinkDB
Position
Unknown
AA seq 1250 aa
MASGVGEQAHGSVASQFSSNEKDTAFDMTTSEKVVELLNQAALISTEEKLIVLKQVQELI
INKDPSLLDNFLDEIIAFQTDKSIEVRKFVIGFIEEACKRDNELLLRLIANLNMLMRDES
VNVVKKAILTLTQLYKVALQWLVRTKSVSDMQEPCWDMVTQMKEDVLALLDSDNDGVRTH
AIKFTESLIITLSPRTHDSDTPKKQEGDISLDKIPKDHTYIRYDTLCEEGKLALEQLLKF
MVHPAISSINLTTALGSLATLARQRPMFMSEVVQAYETLHANLPPTLAKSQVSSVRKNLK
LHLVSVLKHPSSVDFQGQISTLLLDLGMSQSEITRCTPATVQPRKRLHHEPYVEGKRIKM
EATLVEDDDDKEEPAPVVTPKPSSSAGTQSSIDLTAEFLLPLLNPENVANLVLISMVYLP
EVMPASFQSTYTPVESAGTDAQIKHLARLMATQMTAAGLGPGLELCKARDEEVKEEDGGA
GESSSKDPLIIRKLSAVSLGQAISVVGAQLAAYKSPVTEEAPQIKKLPEPILPTTQPKAP
GASGRKKVFKLADVVQPFSEAQIEKLANMAIKRILQSEKAIAQSGKSHVRVKLLARLVTQ
FEDGKKNYLLQFILEDMRGRSELAFSLLFHEYNEYLSQQPSGSLDSYEHCLFTLLSGLQE
KPEQRDGLFTKLVLEAPVITDSALEVIQCYCEDESRVYLGMSTLKELILKRPSRQYQYLN
VLLNLSSHEKEKVRSTALSFIKRMYEKEHLKDCIEKFALTYMQFLVHPNPPSLLFGAGED
TEVAAPWTEETVRQCLYLYLSLLPLNHRLVHELAAVYTEAIADIKRSVLRVIEQPIRGMG
MSSPDLLLLVEDCPKGAETLVTRCLHILTDKVPPSPELAERVRDLYHKRVPDVRFLIPVI
NGLEKNEVIQALPKLIKLNPIVVKEVFNRLLGTQHSEGSSSMSPLTPGELLIALHNIDSS
KCDMKSIIKATNLCFGEKNVYTSEVLAVVMQQLMEQTPLPILLMRTVIQSLSMYPRLAGF
VMNILARLILKQVWKYPKVWEGFVKCCQRTKPQSYNVLLQLPPPQLASVFERCPEMREPL
LQHVHSFTPHQQALIPASIMAVLEANSRKPEPEPQAELHHPEIIEEREVPVPKHISMPAP
VSQVEPPAPTPIVFTEPPPTQQQQQIPARREEEEEEPMEQREMDHAALEVTSEAASQQME
VSEEASQSNSISEKTDEPMEESAAMPVDAPDQPKDESEDVVPEAEESSVD
NT seq 3753 nt   +upstreamnt  +downstreamnt
atggcgtcaggtgtgggagaacaagcgcatggtagcgtggcctcccagttctccagcaat
gagaaggacacagcctttgacatgaccaccagcgagaaggtggtggaattgttaaaccag
gcagcactcatctctacagaggaaaagcttattgttctcaaacaggtgcaggagttgatt
atcaacaaggacccttcattgcttgataattttctggatgaaatcatcgcatttcagact
gataagtcaattgaggtgcgaaagtttgtcatcggattcattgaggaggcatgtaaaaga
gacaatgagcttctgctgaggctgattgccaacctgaacatgctgatgagagatgagagt
gtgaatgtggtgaagaaggccattctgacactcactcagctatacaaagtggctttacag
tggctggtgcgcactaagagtgtctcggacatgcaggagccatgctgggatatggtgacc
cagatgaaagaggacgttctggcattgctagactccgataacgacggagttcgcactcac
gccatcaaattcactgagtccctcatcatcactctgtcaccacggacacatgactctgat
acgcccaagaaacaggagggagacatcagcctggacaaaatccccaaagaccacacgtat
attcgatatgacaccttgtgtgaggagggaaagttggctctggagcagttgttaaagttt
atggtgcaccctgccatctccagcattaatctcaccactgcacttggatcactggctacg
ctggccagacagcggcccatgttcatgtctgaggtggtgcaggcatatgagacgctacat
gctaacttgcccccgactctggctaagtctcaagtgagcagtgtgcgcaagaacctgaag
ctgcacttggtctcggtgctgaagcaccccagcagcgtggacttccagggccagatttcc
actctgctgctggaccttggtatgtctcagagcgagatcacccgctgcacgccagccacg
gtacagccccgtaagagactccaccatgagccctatgtcgagggcaagaggatcaagatg
gaggccactctagtggaggatgatgatgataaggaagaaccagctccagttgtcacccca
aaaccatcctcctccgctggcacccaatcatccatcgatctcactgctgagttcctgttg
cctctgctgaacccagagaatgtggccaacctggtgctcatcagtatggtttacctgcct
gaagtgatgccggcctctttccagtccacctacacacctgttgaatcggccggcactgat
gctcagatcaaacatttagccaggctgatggccacacagatgactgcggctggactggga
ccagggctggagctgtgtaaggctcgagatgaagaggtgaaggaggaagacggcggagcg
ggtgagtccagctccaaagaccctctcatcatccgcaaactgtctgctgtgtccctgggt
caagccatctcagtggtgggggcgcaactagcagcctacaagagccctgtcaccgaagag
gcacctcagatcaagaagcttcctgagcctatactgcccaccacacagcccaaagctcct
ggggccagtggcagaaaaaaagtgttcaaattggctgacgtggtgcagcctttctcagag
gctcagatcgagaaactcgccaacatggccatcaagcggatccttcaatcagaaaaggcc
attgcacagagtgggaagtcccatgtccgtgtgaagttgcttgcacggttggtgacccag
tttgaggatgggaagaaaaattacttgttgcagtttattttggaggatatgcggggcaga
agtgagctggccttttctctgctgttccatgagtacaatgaatacctgagtcagcagccc
tcgggctctctggacagctatgagcactgtctgttcacactgctgtccggcctgcaggag
aaacctgagcagagggatgggcttttcaccaagcttgtgttggaggctccggtcattaca
gactctgcactggaggtgattcaatgctactgtgaggacgagtcacgtgtttacctgggc
atgtccacattaaaggagcttatcctcaaacgcccctccagacagtaccagtacctcaat
gtccttctgaacctcagctctcacgaaaaagaaaaggtgcggtccactgctctcagcttc
atcaagcgcatgtatgagaaggaacatctgaaggactgcattgagaagttcgctctcacc
tacatgcagtttctggtccacccaaacccaccttctcttctgtttggagcaggggaggat
acagaggtggcggctccctggacagaggagacagtgcggcagtgtctttacctctatctc
tccctccttcccctcaaccatcgtctggtgcacgagctggctgccgtctacaccgaggcc
atcgccgacatcaaacgcagtgtgctcagggtcattgaacagcctataagaggaatggga
atgagctctcctgacctgctgctcctggtggaggactgtcctaaaggagcggagacgctg
gtcactcgctgtctgcacatactcactgataaagtgcctccatctcctgagctggcggag
agggtgagggatctttatcataagcgagtgccagatgttcgtttcctcatcccagtgatc
aatggcctggagaagaacgaggtgatccaggctctacccaaactcatcaaactcaatccc
atcgtggtgaaggaggtgttcaacagactgctgggcacgcaacacagtgagggcagttcc
tccatgtctccgctaactcctggagagctcctcatcgccttacacaacattgactcctcc
aagtgtgacatgaagtcaatcatcaaagccactaacctgtgttttggggagaagaacgtg
tacacctccgaggtgctggctgtggtgatgcagcagctgatggagcagacccctctcccc
atactgctgatgcgtacggtcatccagtccctctctatgtaccctcgcctggccggtttc
gtcatgaacatcctagcccgactcattctcaaacaggtgtggaagtatcctaaagtgtgg
gagggctttgtaaagtgctgccagcgcaccaaaccccagtcctacaacgttctcctccag
ctgcctccaccacaactggctagtgtgtttgagcgctgcccggagatgagggagcccctc
ctacagcacgttcactccttcacccctcaccaacaagccctcattccagcatctataatg
gccgttctggaggccaacagcaggaagccagaaccagaaccacaagctgaacttcatcat
ccagaaataatagaagagcgagaggtgccagtaccaaagcatatatcaatgcctgcacca
gtatcacaagtagaacctccagccccgactcccatagtgtttactgaaccaccaccaact
caacaacaacaacagatcccagccaggagggaagaagaagaagaagagcccatggagcag
agagagatggaccatgctgctctggaggtcacgtctgaagccgcatcgcagcagatggag
gtgtctgaggaggcttcacagtccaactccatttcagagaagacagacgaacccatggag
gagtcagctgcgatgcctgtggatgcgcctgaccaacccaaagatgagtctgaggatgtg
gttccagaagcagaagaaagcagtgtggactga

DBGET integrated database retrieval system