Sinocyclocheilus anshuiensis: 107686050
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Entry
107686050 CDS
T04917
Name
(RefSeq) SWI/SNF complex subunit SMARCC1-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107686050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sanh03021
]
107686050
03036 Chromosome and associated proteins [BR:
sanh03036
]
107686050
Transcription machinery [BR:
sanh03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107686050
Chromosome and associated proteins [BR:
sanh03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107686050
PBAF complex
107686050
GBAF(ncBAF) complex
107686050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
HEAT_GCN1
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
107686050
NCBI-ProteinID:
XP_016338369
LinkDB
All DBs
Position
Unknown
AA seq
1101 aa
AA seq
DB search
MATAATAAGGTGSGGPSAGQAGAGSSIGRKKDGGPSSKFWESSETVSQLETVRLWIGKHY
KKYVQTDSPTNKTLAALVVQLLQFQEDAFGRRVSNPALTKLPAKSFLDFKPGGALCHILG
SAYKFKSEQGWRRFDLQNPSRMDRNVEMFMTIEKTLVQNNSLTRPIVYIVSDMEQKQANK
LKDIIKRHQGTITEEKSKATHIIYPSPAQVEEEEWLRPVMRKDKQVLVHWGNYPDSYDTW
VSTNDVDGDVEDPPSSEKPWRVHAKWVIDTDAFNEWMNEEDYEVDENKKPVSFRQRIFPG
EEVSSRTPDRKDRKSLVAGKKRRRSPSPPSTPVESRKKGKKGNPGSQGRRRGHQNDDEQD
EDLTKDLEDPSPVPGMEEVTLPKNVNQKKDSENTPVKGGTVADLDDQEDDSLASGGKEED
EQGKTEVNRLIDSEDNVTEQTHHIIIPSYAAWFDYNSIHEIERRALPEFFNGKNKSKTPE
IYLAYRNFMIDTYRLNPQEYLTSTSCRRNLTGDVCAVMRVHAFLEQWGLVNYQVDAESRP
LPMGPPPTPHFNVLTDTPSGLVPLHHRPPQVPPAQQMLNFPEKGKDKPTDLQNFGLRTDI
YSKKNPKGKGAAGGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPI
EDQYLESSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVAAAAAKAALEEFSRVR
EEVPMELVEAHVKKVQEAARSTGKVDPAFGLESSGIAGTAPEEPEKTEPTETEKMDTDSN
SQPDKAESKDEAEKPSESAEKPTETEKEKNETTEKSELQEEEESEGGESKTAEKDKDEDM
ETTEEGKEGEEEKEEGKKKLELDIGEGNIATAAAAALASAATKAKHLAAVEERKIKSLVA
LLVETQMKKLELKLRHFEELETIMDREKEALELQRQQLLTERQAFHMEQLKYAEMKARQQ
MEQQAAAQQNAGGHHGPPPHGPSPHGPPPGMHPGHPGHPGHPGPGYPPMHHAMGPHHAPQ
TGPMVGLGQPMPGQPMPGRMMPGPPPVGPPQGGMPPMMGPRHPGPPNGMYPGPPPTAQPD
GMPPGPVGPPVSAPPPRAAEN
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagcggcaactgcagcgggcggaacgggctccggaggaccatcggccggccag
gcgggcgccggttcctcgatcggacgtaaaaaagacggagggccttcttccaaattttgg
gagagctcggaaacggtgtctcagttggagacagttcggctgtggattgggaaacattat
aagaagtatgtccaaaccgactctcctacaaacaaaactttggctgcgctggtggtgcag
ttgctgcagtttcaggaggatgcatttgggcgtagagtcagcaatcctgctcttaccaaa
ctacctgcgaagagctttctggatttcaaacctggaggagccctttgccacattctgggt
tctgcatacaagttcaaaagtgagcaaggctggaggaggtttgatctgcagaacccatcc
agaatggatagaaacgtggagatgttcatgactattgagaagactcttgttcagaacaac
tctttgacccggccaattgtgtacattgtgtctgacatggagcaaaagcaagccaataag
ctcaaagacatcattaagagacatcagggaaccatcactgaagaaaagtcaaaggccact
catattatttacccctccccagcccaggtggaagaagaggaatggctacgtcccgtcatg
cgcaaagacaagcaagttttggttcactggggcaattatcctgacagttatgacacatgg
gtatcaacaaatgatgtggatggagatgttgaggatccaccaagttctgagaaaccatgg
agggtgcatgcaaaatgggtcatcgacacagatgctttcaacgagtggatgaatgaggaa
gattacgaagtggatgagaacaagaagcctgtgagtttccgccagcggatctttccaggg
gaggaagtgtcttcccgtacacccgatcgtaaggaccgcaagtccctggttgccggcaag
aagaggagacgctctccatccccacccagcacccctgtggagtcccgcaaaaagggcaag
aaagggaatcctggatcacaggggaggcgccgtggacatcaaaatgatgacgagcaggat
gaagacctcacaaaggacctggaagatccctcccctgtgccaggaatggaggaagttaca
ttgccaaaaaatgtcaatcagaaaaaggacagtgagaacacaccagtgaaaggcggaacg
gttgctgatttggatgaccaggaagatgattcactagcatctggaggcaaggaagaggat
gaacagggcaaaaccgaggtcaatcgtctgatcgactctgaggacaacgtgactgaacaa
acccatcacatcattatacccagctatgctgcctggttcgactacaacagtatacatgaa
attgagaggcgtgccctgccagagttcttcaatggcaaaaacaaatccaagactccagag
atctatctggcttatcgtaacttcatgattgacacataccggctgaatcctcaggagtac
ttgacctccacctcctgcaggagaaacctcactggagatgtgtgtgcagtcatgagagtg
catgcctttttggagcagtgggggctggtgaactaccaggttgacgctgagagcagaccc
ctccccatgggccctccaccaacgccacatttcaacgttctgactgatactccctctggg
ttagtgccactgcaccaccgccctccacaggttccccctgctcagcagatgctgaacttc
ccagaaaagggcaaagacaagccaactgacctgcagaactttggcctccgtacagatatt
tactcaaagaagaatcccaagggcaaaggggctgctggtgggagagagtggactgagcaa
gaaacgttgcttctgttggaggctctggagatgtataaggatgactggaataaggtttca
gagcacgtgggcagccgtacacaagatgagtgcatcttgcactttctgcggctgcccata
gaggatcaatacctggagagctccgaagcctcgctaggccctctggcttaccagccgatc
cccttcagccaatcaggaaatcctgtcatgagcactgttgcatttcttgcctctgtggtc
gacccacgtgtggcggcggctgctgccaaagcagctttggaggagttctcgcgtgtgcgt
gaggaggttcccatggagctggtggaggctcatgtgaagaaggtacaggaggctgcgcgc
agcacaggaaaagtagaccctgcgttcggcctggagagcagtggcattgctggcacagct
cctgaggaaccagagaaaacagaacctacagagactgagaagatggacactgactcgaat
tcccagcctgataaggcggagtcaaaggatgaagcagagaagcccagcgagtctgcggaa
aagccgacagagacagagaaagaaaagaatgagactacagagaaatctgagctgcaggaa
gaggaagagagtgagggaggagaatccaagacagcagagaaagacaaagatgaggacatg
gagaccacagaggaagggaaggagggcgaggaagagaaggaagaaggaaagaaaaagctt
gagttggatatcggagagggcaacatcgccactgccgccgctgctgccctggcctctgct
gccaccaaggcaaagcacctggctgcagtggaagagaggaagatcaaatctcttgtggct
ctgctggtagagactcagatgaagaagctggagctcaaactcagacactttgaagagctg
gagaccatcatggaccgtgagaaggaagccctggagctccagaggcagcagcttttgaca
gagcgacaggcattccacatggagcagttgaagtacgccgagatgaaggctcgtcagcag
atggagcagcaagcagctgcgcagcagaatgcaggaggacatcacggaccacctccacat
ggcccatctccccacggcccccctccaggcatgcaccctggacacccaggacatcccggg
cacccgggccctggatatccccccatgcaccatgccatgggtccccaccatgcccctcag
acaggaccaatggttggactaggccagcccatgccaggtcagcctatgccaggccgaatg
atgcctggacctcccccagttggacccccacagggtggcatgcctcccatgatgggacct
cgacaccctggaccacccaacggcatgtacccaggtccacctccaaccgcacagcctgat
gggatgccccctggcccagtgggacctcctgtatctgcgccccctcctcgtgctgctgaa
aactaa
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