Sinocyclocheilus anshuiensis: 107686886
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Entry
107686886 CDS
T04917
Name
(RefSeq) retinoic acid receptor RXR-alpha-A
KO
K08524
retinoid X receptor alpha
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03320
PPAR signaling pathway
sanh04148
Efferocytosis
sanh04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107686886
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
107686886
03320 PPAR signaling pathway
107686886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sanh03000
]
107686886
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sanh03310
]
107686886
Transcription factors [BR:
sanh03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
107686886
Nuclear receptors [BR:
sanh03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
107686886
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
107686886
NCBI-ProteinID:
XP_016339516
LinkDB
All DBs
Position
Unknown
AA seq
518 aa
AA seq
DB search
METKPFLSLGFLKPQCSIPPPPQRGRAEACTCFSGMCALHQRRLSTDLLMPRTPKCDDPF
RRTPFLTYKDSSGQVTSSPLSSPTSHRGMHPSLLSPTSLGPSGSLHSPISTLSSPMNGLG
SPFSVISSPMGPHSMASPGMGYGPSISPQLNSPMNSVSSSEDIKPPLGINGVMKVPAQPL
GTPLSLTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDSKDCIIDKRQR
NRCQYCRYQKCLAMGMKREAVQEERQRAKDRSENEVESTSSTNEDMPVEKILEAELAVEP
KTETYIETNVPMPSNSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAG
WNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMEMDK
TELGCLRAIVLFNPDSKGLSNPGEVEALREKVYASLEAYCKQKYPEQPGRFAKLLLRLPA
LRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaaacctttcttgtcattggggttcctgaaaccccagtgctcgataccaccg
ccacctcagagaggacgagcagaagcatgcacgtgtttcagcggaatgtgtgctcttcat
caacgcaggctttctacagacttgttaatgccaaggacccccaaatgtgatgatcccttt
agacggacccccttcctaacatataaagactcctcgggacaggtgacgtcctctcctctt
agctcacccacgtcccaccgggggatgcatccgtcactgctgagcccgacttcattaggc
ccctcggggtctctgcactcccccatcagcactctgagctcgcccatgaacggcctgggc
tctcccttttctgtcatcagctcacccatggggccacattccatggcgtcacccgggatg
ggctacggccccagcatcagcccacagctgaattcgcccatgaactctgtcagcagctca
gaagatatcaagccacccctgggcatcaacggtgtgatgaaggtgccagcccagcccttg
ggcacccccctttccctcaccaaacacatctgtgccatctgcggcgaccgctcctcaggt
aaacactacggtgtgtacagctgcgaggggtgcaagggtttcttcaagaggactgtgcgt
aaggacctgacctacacttgtcgagacagcaaggactgtattatcgacaaacgccagcgc
aaccgctgccagtactgccgctatcagaagtgtttggccatgggcatgaagagagaagcc
gtccaggaggagcgccagcgagccaaggaccgcagcgagaacgaggtggagtcgaccagc
agtacaaacgaagacatgcctgtggagaagatcctggaggcggagcttgctgtggagccc
aagacggagacttacattgaaaccaatgtaccgatgccctcgaattcacccaatgatcca
gtcacaaacatctgtcaggccgcagacaagcagctcttcactctagtggaatgggccaag
aggatcccgcatttttccgagctcccgctggacgaccaggtcattcttctacgagcagga
tggaatgagctcctcattgcatcattttcacaccgttcaatagcagtgaaagatgggata
ctgttggccacaggattgcacgtgcaccggaacagcgcccacagtgccggagtaggagcc
atatttgacagggtgctgacggagttggtgtcaaagatgagagacatggagatggataaa
acagagctagggtgccttcgagccattgtcctcttcaatccagactccaaaggcctgtca
aacccaggtgaggtggaggcgctgagagagaaggtctatgcctctctggaagcctactgc
aaacagaagtaccctgaacaacctggaaggtttgctaagctgttgctgcggctccctgcc
ctgcgttccattggactgaagtgtttggagcatctgttcttcttcaagctcataggggac
acgcccatcgataccttcctcatggagatgttagaggcgccccaccaaatgacataa
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