Sinocyclocheilus anshuiensis: 107687009
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Entry
107687009 CDS
T04917
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
107687009
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sanh04054
]
107687009
Enzymes [BR:
sanh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107687009
Pattern recognition receptors [BR:
sanh04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
107687009
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_22
Hydantoinase_B
Motif
Other DBs
NCBI-GeneID:
107687009
NCBI-ProteinID:
XP_016339635
UniProt:
A0A671T8A4
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MAAQMDFNLRPYQEEVVQTALRGENSIIWLPTGGGKTRAAVYVTHNHLETTANAKVAVLV
NKVHLVDQHFAKEFKPYLESRCKITAISGDSNEKDLFGRLVKASDLVICTAQILENALIN
MEEEKHVELTDFTLLVIDECHHTQKESVYNKIMGRYVEKKLRKEGNLPQILGLTASPGTG
GNRKLDKAVDHVLQICANLDSVIVSTKNFTPVLQEVVPRPKKHYDIVERRALDPFGDHLK
SMMSMIHEIMPSTVSRSLREMGTQEYEADVVELEKTGVKTENRLIAQCALHLRQYNDALL
INDTVRMVDAFRGLDEFYNSRKTKLLDGTDIFLQGLFDENRMELKLLALDDRYENPKLAR
LQRTLLDEFSDKNSHGILFSKTRRGTHCLYDWVNTNLALLRVNIKAGILTGAGTGANHMT
QNGQKETIQQFRVGVLNLLISTSVAEEGLDIPECNLVVRYGLLTNEIAQQQASGRARAMN
SVYSVVAEEGGRDLRRELINEYLESLTAKAIDQVQQMSPREFRHKISELQQIAVLIRIQA
ERKKDERKQRYSPGQAQFQCRGCFLPVCSGEELRKIENTHHVNINPEFVRHYRTGGQVFL
ERSFEDWEPGQVISCNKCGKDWGMEIRFRSVVILPCLKIKNFSLKTPGGKSTPKQWKDVE
FQVKEFNFLEDMSSRFPDLDLDDRHTI
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacagatggacttcaaccttagaccgtaccaggaagaggtggtgcagacagcg
ctcagaggggagaacagcatcatctggctgcccaccggtggaggaaaaacccgtgctgcg
gtttatgtcactcataatcacctggagaccacagccaatgccaaagtggcagtgctcgtc
aacaaggtgcatctagttgaccagcacttcgcaaaagaattcaagccttatcttgagagt
agatgcaagataacagccatcagtggggacagtaatgagaaagacttgtttgggcgtcta
gtcaaggcctcagacctggtcatctgcacggctcagatcttggagaatgccctgattaac
atggaggaggaaaaacacgtggagctgactgactttaccctgctggtaatagacgaatgt
caccatacacaaaaagagagtgtctataataagattatgggccgctatgttgaaaagaaa
ttgagaaaagaagggaatctgcctcagattttgggcctcaccgcatcacctggtacagga
ggaaataggaaactggataaagctgttgatcatgtactgcagatctgtgccaatctggac
tcagtaattgtgtccaccaagaattttacaccagtgctacaggaagtcgtccccagaccc
aaaaagcattatgacattgttgaaagaagagctctggatccatttggcgaccacttgaag
tcaatgatgtcgatgattcatgagattatgccgtcaacggtgagtcgcagcctgcgagag
atgggcacccaggaatatgaagctgacgtggtggaactagaaaaaacaggtgtaaagaca
gagaacagactgattgctcagtgtgctttgcacctgcggcaatacaacgacgctcttctc
attaatgacactgttcgcatggtggacgcgttccggggtctagacgagttctacaattca
cggaaaactaaattgctggatgggacagacatctttctccagggactttttgatgagaac
cgcatggagcttaaactgctggcactggatgaccgctacgaaaaccccaaactggcccgt
ttgcaacgcacattgctggatgagtttagtgacaaaaactctcatggtatccttttctca
aagacccgcaggggcacccattgtctttatgactgggtgaacaccaaccttgcgctgctg
agggtcaacatcaaagctggcattctcactggagcgggtacaggtgcaaatcacatgacc
cagaatggacagaaggaaaccatacaacaatttagagttggagtcctcaacctcctcatc
tccaccagtgtagctgaggaaggacttgatattccagaatgcaacttagttgtacgttac
gggctgttgaccaatgagattgctcagcagcaggccagtgggcgggctcgagctatgaac
agcgtctattcagtggtggctgaagaaggtgggcgtgatctacgcagggaacttatcaat
gagtatctagaaagtctgactgcaaaagctattgaccaagtgcagcaaatgagtcccaga
gagtttagacataagatatccgagctccaacaaatcgctgttctgattcgaatccaggcc
gagaggaaaaaggatgagaggaagcaacgctatagtcctggtcaggctcagtttcaatgc
agaggatgcttcttgcctgtctgcagtggagaagaattaagaaaaatagaaaatacacac
catgtcaacatcaaccctgagtttgtgaggcattatagaacaggtgggcaggtctttctg
gagaggagctttgaagattgggagcctggacaggttatcagctgcaacaaatgtggaaag
gactggggaatggagattaggttcaggagtgtggtaatactcccctgcttaaaaataaaa
aacttttccttgaagactcctggaggcaaatccactcccaagcagtggaaggatgttgag
ttccaggtgaaagagttcaactttcttgaggacatgagcagccgtttccctgacctagac
ttagatgacagacacaccatttaa
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