Sinocyclocheilus anshuiensis: 107688508
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Entry
107688508 CDS
T04917
Name
(RefSeq) nucleoporin NDC1-like isoform X1
KO
K14315
nucleoporin NDC1
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107688508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanh03019
]
107688508
Messenger RNA biogenesis [BR:
sanh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107688508
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Curto_V3
Motif
Other DBs
NCBI-GeneID:
107688508
NCBI-ProteinID:
XP_016341680
UniProt:
A0A671QNX7
LinkDB
All DBs
Position
Unknown
AA seq
671 aa
AA seq
DB search
MFSLKQNSWFIRKVVIWRAVASIAWSVLLLPVTTAVFVLLSRFSLFHPIQWISDCTSLLA
ASSTIFSLVVLCGVVLITGFFNLEFYTLVPSIPCSRMALLGTVLHPRQCVHSLVYCTMGM
LVMWCASVTIGGRYSTLGTTCRQSESGEVVTCLNEYHLFILLAGAFMGYSHSFLGVVQNM
YYVSFQPIQQYKYPRFKGCLPMVVKCSVIQALYSARNFAAFYFFFGYAPKTWISSTLNLQ
IDSSLQPLDSLTGLLDLSLLYHLSISGTFLYLTWYLTVLLFRIYVTEAYSFPVQSTFTED
AEQSLPKVLAEKNTLVMKFLALQDLALLSQHSLSRRLEVFSLSQPGGHAHNWNAISRECL
SLLSELTQRLVAHQDAVASNGRVKSQSASSDTRSASSSSSVVSGTEDIAETPRLSVPLRT
PGSVFKSSVGGANSALTAPFTPDVDSPFSSPAIRRLVGQQDPQSPCFGTVQSPHIMRRGP
KPWSASTESQSSGSPPASPATVPSPPAASQKPSFLAQWLQNRREQVKSFLAKRVLIMYLF
NKLPEASSQALFADSQAHIWALQGLSHLVAASFSEDQFGVVQTTLPNILSCLVVLLEAVD
RHFKLPHASSKPVRTICSMGDSTYKTLRFLLRAVLKTTIYKITTTFGEHLNAVNISTEHR
KRLQQFLEFKD
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgttttctctgaaacagaattcttggtttataagaaaggttgtgatatggagggctgtg
gcgagtattgcatggtcagtgcttctcttgccagtgacaactgcagtctttgtgctcttg
agcagattcagcctttttcaccccatccaatggatttcagattgcacaagtcttcttgcg
gcctcaagcaccatcttttcccttgtggtgctgtgtggggtggttctgataactggcttt
tttaacctggagttctacactttggttccctctattccatgttcacgcatggctctcctg
gggacggtgctccaccctcgacagtgtgttcattctttggtctactgcaccatgggcatg
ctggtaatgtggtgcgcttctgttaccatcggtggacgttacagcactctaggaactacc
tgcaggcaaagcgagagtggtgaagtagtgacctgtctgaatgagtatcatctctttatt
ctcctggctggggccttcatgggatacagtcatagtttcttgggagtggttcaaaatatg
tactatgtgtcctttcagcccatacaacaatacaaatatccgcggttcaagggctgtctg
ccaatggtggtgaagtgcagtgttattcaggccttatattcagccaggaattttgctgct
ttctatttcttttttgggtatgctcctaagacctggatctccagcacacttaatctacag
atagacagttctctccaaccactggattcattgactggacttctagacctctccctcctt
taccacctgtcaatcagtggcactttcctgtacctaacctggtatctcactgtgcttctc
ttcaggatttatgtcacagaggcctacagttttccagtgcagtccacatttactgaggat
gcagaacagagtcttcccaaagttttggctgagaagaacactttagtcatgaagtttttg
gctctacaagacctggctctgttatcacaacattctctctcacgcagactagaagtcttc
agtctgagtcagccaggtggtcacgctcataactggaatgccatcagtagggaatgtctg
tctttactaagtgagctgacacagagactggtggctcatcaggatgcggttgcctctaac
ggccgagtcaagtctcagtctgccagcagtgacaccagatcagcctcttcaagcagctca
gtggtgtcaggaacagaggacattgctgagacccctcgactcagtgtcccgctaaggacc
cctggttcagtcttcaagtcatcggtggggggtgcgaacagcgctttgacggctcctttc
accccagatgtggacagccctttctcttcccctgctattcgacgtctggttggccaacag
gatccccagtctccctgctttggtacagtacaaagcccccatatcatgaggagagggccc
aaaccgtggagtgcctccacagagtcacaatccagtggcagtcctcctgcgtcccctgcc
actgttcctagtcctcctgcagccagtcagaaacccagcttcctggcccagtggctacag
aacaggagagagcaggttaaaagctttttggcaaagcgggtgctgataatgtatttattt
aacaagcttccagaagcctctagccaagctctgtttgctgacagccaggctcatatctgg
gctctccaaggactatcgcatctggtggcagcctctttctctgaggatcagtttggagtt
gtgcagaccacattacccaatattcttagctgcttggtagtcttgctagaggctgttgac
agacacttcaaactgccacatgcctccagcaaacctgtgaggactatctgcagtatggga
gattccacctacaaaactctaaggtttttgctgagggctgtgctgaagaccaccatctac
aagataactaccacttttggagagcacttaaatgctgtgaatatttcaacagaacataga
aaaaggcttcagcagttcttggaattcaaggattaa
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