Sinocyclocheilus anshuiensis: 107689139
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Entry
107689139 CDS
T04917
Symbol
thoc2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03013
Nucleocytoplasmic transport
sanh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107689139 (thoc2)
09122 Translation
03013 Nucleocytoplasmic transport
107689139 (thoc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanh03019
]
107689139 (thoc2)
03041 Spliceosome [BR:
sanh03041
]
107689139 (thoc2)
Messenger RNA biogenesis [BR:
sanh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
107689139 (thoc2)
Spliceosome [BR:
sanh03041
]
Complex C
Other components
EJC/TREX
107689139 (thoc2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
107689139 (thoc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
107689139
NCBI-ProteinID:
XP_016342534
LinkDB
All DBs
Position
Unknown
AA seq
1551 aa
AA seq
DB search
MAALILPSDWIKNWDKSGKNEFFQFFQGLAGKPSSHEFVKDLQTALYELCWHAIQGNLKV
DVAASLLADVMELRDDMPSILADVFCILDIETGCLEEKHKRDHFTQLVGACLICVPDGML
KERLDPETLESLGLIKQAQQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDL
MGNLTSHLVLENIKSLIGCFNLDPNRVLDIILEVYECRSEHDEFFIPLIKSYMCEHQTLC
HMLGFKFKFHQEPNGETPSSLYHIAAALLQHNLIALEDLYVHLLPLDSSIVEEHKREILE
AKQIARKLTMVLVPSEKTEDKEKEKEKEEEKNEKPPDNQKLGLLEALLRIGDWQHAQSIM
DQMPAFYATSHKAIAIALCQLLHLIVEPLYRRAAVPKGAKGGLMTPLRNKQALRPAESFD
DLSRGVFAMLCYLGPHMSHDPILFAKVVRLGKSFMKEYQNESRQDTKDKMDSLLSCFLST
ADQVLLPSLSLMECNACMSEELWGFFKLFPYQHRYRLYGQWKNETYGNHPLLVKIKAQTV
DRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQWYDNLISPVVDSLKYLTS
LNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKYPIELAGLLQYVTN
QLKAGKSFDLLILKEVVQKMAGIEITDEMTVEQLEAMTGGEQLKAEGGYFGQIRNTKKSS
QRLKDALLDHELALPLCLLMAQQRNGVVFSEGGEKHLKLVGKLYDQCHDTLVQFGGFLAS
NLSTEDYIKRVPSVDVLCNQFHTPHDAAFFLSRPMYAHQILSKYDELKKAEKGSRQQQKV
HKYIAACEQIMAPVHEAVVSLHLPRVWDDLRPQFYATFWSLTMYDLAVPHNAYDREVNKL
KIQIKAIDENTEMPLNKKKKEKERCTALQDKLQEEEKKQLEHVQRVLHRLKLEKDNWLLA
KSTKNETITKFLQLCIFPRCVFSAIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSDIIY
TVASCTENESRRYGRFLCCMLETVTRWHSDRAIYEKECGNYPGFLTIFRASGFDGGNKAD
QLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQALEC
RVHKICQEEKEKRPDLYALAMGYSGQLKGRKVHMVPENEFHHKEQPVRSATPGTLQNGPG
NTGKPAAAASAGKAEEGAVEDSDKSKDKSQAAQKTASKNSTAANKVSSSNGSSMPNSTKG
SKEKEDKEKTTKEKKEKKDKNPGSTPEAKAGGKDKQKEEKPTDSKEKTPKADKDKRKDDK
KEEKSKIDGKSAEKEWSKERDLSNDSKTKEGSKVEKNAGAGSMKSLVPRSEGVESERAEQ
KRRKLDTHSSPSHSSAVKDNLNDFKDSASKHHPNHSTVLPKSKEKDDEKKESDKSRDRSK
EREKKEDRKDRKRDYSNSDREMSQEAKRRKDENGMSSSKHSKSASPSESPHSNDKDNSKR
SKSTSKDKSDLAKPEKTSGGKKESRHDKEKSEKKRDSTGAKEEKKQYPLMP
NT seq
4656 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgatcctcccgtctgactggataaaaaactgggacaaatccgggaaaaat
gagtttttccagtttttccagggccttgcagggaaacccagcagtcatgagtttgttaaa
gatctgcagacagccctgtatgagctctgctggcatgctatccagggcaatctgaaggtg
gatgtggctgccagtctcctggctgatgttatggaactgcgggacgatatgccttctatt
ttagcggatgttttctgtatattagatatcgagactggctgtttggaggagaaacacaag
cgagatcattttacccagctggttggagcctgtttgatctgtgttcctgatggtatgctg
aaggagagattagatccagaaacgctggagtctctggggctgatcaaacaggctcagcag
ttcaaccagaagattgtcaaaatcaagaccaaactattttacaaacagcagaagttcaat
ttgttgcgcgaggagaatgaaggttacgctaagctgatcgcggagcttgggcaggatctg
atggggaatctcaccagccacctcgtccttgagaacatcaagtcattaataggatgtttc
aatctggacccaaaccgtgtgctggacatcatcttagaggtgtacgagtgtcgctctgag
cacgacgagttcttcatccctcttatcaagtcctacatgtgcgagcaccagaccctctgc
cacatgctgggcttcaagttcaagtttcaccaggagcctaatggagaaacgccatcatct
ctgtaccacatcgctgcagctcttcttcaacacaacctcatcgctcttgaagacctctac
gttcatctcctcccactggattccagcatcgtggaagagcacaagagagagatcctggag
gccaaacagatcgcccgcaaactcaccatggtgcttgtcccctccgaaaagacagaggac
aaggagaaggaaaaggagaaggaagaggaaaagaatgagaagcctcctgataaccagaag
ctggggctgctggaggcgctgctgaggatcggtgactggcagcacgctcagagcatcatg
gatcagatgccagctttctacgccacctcccacaaggccatcgccatcgcactgtgccag
ctgctgcacctgatcgtggagccgctctaccgcagggctgcagtccccaaaggtgccaaa
ggcggtttgatgacgcctctgcgaaacaaacaggcactgcggccggccgaaagcttcgac
gatctctccaggggcgtcttcgccatgctgtgctacctgggccctcacatgtcccacgac
cccatcctgtttgccaaggtcgtgcgactgggcaagagcttcatgaaagagtaccaaaat
gaaagcaggcaagacaccaaggacaaaatggactctctgctgagctgttttctcagtact
gctgatcaggtgctgttaccgtctctctcgctcatggagtgcaacgcctgcatgtccgag
gagctctggggcttctttaaactcttcccctaccagcacaggtatcgtctctatgggcag
tggaagaatgagacgtacggcaatcatccactcctggtgaagatcaaggctcagacggta
gacagagccaaatacatcatgaagcgactgactaaggagaacgtgaagccctcaggaagg
cagatcggaaagttaagccacagtaaccccaccattctctttgattatattctgtctcag
atccagtggtacgataacctcataagtccagtggtggactctctcaaatacctcacctct
ctcaactatgatgtgctggcctattgcattattgaagctttagccaacccagagaaagag
aagatgaaacacgatgacaccaccatttcatcatggctgcagagtctcgctagtctttgt
ggagcggttttcaggaaatatcccatcgagttagctggtcttctgcagtatgtgaccaac
cagctgaaagctggaaagagttttgacctgctgattctgaaggaggtggtgcagaagatg
gcagggattgagatcacggatgaaatgactgtggagcagctggaggccatgacaggtgga
gagcagctcaaagcggagggtggctactttggacagatcaggaacactaagaagtcatct
cagcgtctgaaggatgctcttctggaccacgagctggcgttaccgctgtgtctcctgatg
gcccagcagaggaacggggtggtcttctctgaggggggagagaagcaccttaaactcgtg
gggaagctttacgatcagtgtcacgacactcttgtgcagtttggtggcttcttggcgtct
aacctcagcacagaagactacatcaaaagggtgccgtcagtcgatgtcctctgcaaccag
ttccacacgccacacgatgctgctttcttcctgtctcggcccatgtatgcccatcagatt
ctgtccaaatatgacgaattgaagaaggcagagaagggcagcaggcagcagcagaaggtc
cataagtacatcgcagcctgcgagcagatcatggcccctgtccacgaagctgtcgtgtct
cttcacttgcccagagtgtgggatgaccttcgacctcagttctacgccaccttctggtcc
ctcaccatgtacgacctggcggtgccacacaacgcctacgaccgcgaggtcaacaagctg
aaaatacagatcaaggctatcgatgaaaacacggagatgcctctgaataaaaagaagaaa
gagaaggaacgctgcacagcgctgcaggacaagctgcaggaagaggagaagaaacagctg
gagcatgtgcagagagtcctgcaccgcctcaaactggagaaagacaactggttactcgcc
aagtccactaagaatgaaaccatcactaagttcctgcagctctgcatcttcccccgctgc
gtcttctcagccattgatgccgtttactgcgctcgcttcgtggagctggtgcaccagcag
aagacgcccaacttctgcaccctgctctgctacgaccgagtgttctctgatatcatctac
acggtagcgagctgcacagagaacgagtcgcgccgctacggccgctttctgtgctgcatg
ctggagactgtgactcgatggcacagcgacagagccatctatgagaaggaatgtggcaat
tatcctgggttcctgacaattttccgagccagtggtttcgacggagggaacaaagcagat
cagctggactatgagaatttccggcatgttgtccacaaatggcattacaagttgactaaa
gcgtcagttcactgtctggagacgggcgagtacacccacatccgcaacatcctgatcgtg
ctcaccaagatcctaccctggtaccccaaggtgctgaacctgggccaggctctggagtgc
cgcgttcacaagatctgccaggaagagaaagagaagaggcccgatctctatgcgttagcc
atgggctactctggccaattgaaaggcaggaaagtgcacatggtgccagaaaatgagttc
caccataaggagcagccagtgcgcagcgccacgcctggcactctgcagaatggaccaggc
aacacgggcaagcctgccgccgctgccagcgctggcaaagccgaggagggcgccgtcgag
gactcagataaatccaaggacaaatctcaggcggctcagaagactgccagcaaaaacagc
accgcagccaataaagtgagcagcagcaatgggagcagcatgccgaacagcactaaaggg
agcaaagagaaggaagataaagagaagaccacaaaggagaaaaaggagaagaaagacaag
aacccaggaagcactccagaggccaaggcaggagggaaggacaaacagaaggaggagaag
cccactgacagcaaagagaagacgcccaaggccgacaaggacaagaggaaggatgacaag
aaggaagagaagagcaagatcgatgggaaatccgctgaaaaagagtggtccaaggaacgc
gacttgtccaacgacagcaagactaaggaaggcagtaaagtggagaagaacgctggggcc
ggaagcatgaagtccctcgtgcccagatccgaaggagtcgagtctgaacgggcagagcaa
aaaagacgaaagcttgacacgcactcgtcaccgtcgcactcctctgcagttaaggacaat
ctcaacgacttcaaggactccgcttcaaagcaccatcctaaccacagcacagtcctgccc
aagagcaaagagaaggacgacgagaagaaagagtctgacaagtccagggaccgttccaaa
gagagggagaagaaagaagaccggaaggaccggaaacgagactactcgaacagcgaccgc
gagatgagccaggaagccaagcgccgcaaagatgaaaatggaatgagctcctccaaacac
agcaagagcgccagcccctccgaatcgccacactccaacgacaaggacaacagcaagcgc
tccaagtccaccagcaaggacaagagcgatctggccaaaccggagaagacatctggaggc
aaaaaggaatccaggcacgacaaagagaaatctgaaaagaagagagacagcactggcgct
aaagaagagaagaaacaatatcctttgatgccataa
DBGET
integrated database retrieval system
