Sinocyclocheilus anshuiensis: 107689212
Help
Entry
107689212 CDS
T04917
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107689212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanh03019
]
107689212
03036 Chromosome and associated proteins [BR:
sanh03036
]
107689212
Messenger RNA biogenesis [BR:
sanh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107689212
Chromosome and associated proteins [BR:
sanh03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
107689212
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
107689212
NCBI-ProteinID:
XP_016342625
LinkDB
All DBs
Position
Unknown
AA seq
1779 aa
AA seq
DB search
MFNKSFGAPFGGGTGGFGTTSTFGQQNTGFGATGGFGSSAFGATNNTGGLFGTTQNKPGG
LFGPSTFSQPVTSSTSSGFGFGATSGTSNSLFGSTNTGGGGLFSQQNNAFGANKPANFGT
FGTSTSSGGLFGTTNTTSNPFGGTSGSLFGSSSFTAAPPGTTIKFNPPTGSDTMVKGGVT
TSINTKHQCITAMKEYESKSLEELRFEDYQAGRKGPSNPMAAGTGGLFGATATATPSTGT
GLFGSSTPNTGFSFGQNKTSFGTSTGAFGTTTGSLFGQPQQQQQQQQQQQQQQQGSSLFK
PFGSATTTQNNTFSFGNSSSMGLFGNTAASQAGGLFGNTNTSTATGFGTGMFGQTNTGFG
NVGTQNLFGNKPAGFGATTTSAPSFGTGTGLFANKPTLTLGTNTNASTFGFGATGTGVGL
FGSKTATTGLGTGLGTGFGGAVGTGQMSLFGNNQNKLGSTLGSVGTFGTGGFNTGANTLT
FGAPQQPVALTDPNASAAQQAVLQQQINALAYSPFGDSPLFRNPLSDPKKKEERLKPTNP
AAQKALTTPTQYKLTPRPATRVRPKALSSSGSSKSQLFDGLDDDEPSLNNGAFMPRKSIK
KLVLKNLNNSSLYNSSVNREADDLASPSEYPQNGLSLSMDEGETREVTVERSGEDDLEVS
KFYTNPITKPIPHAQPSPLLQDTISEFNMRGSASHRNGLEASSEDISLAEDSIQEERDEE
LVALKPPHPAGIASGSSWGYGSVFFSGEVNLTNMNLDEIVHFRRKEIIVYPDDKDKPPAG
EGLNGRAEVTLDGVWPNDKTTCSQIKSLERLTEMNYEGRLEAASRKQGARFLEYRPETGS
WVFEVAHFSKYGLQESDEEDEVPPAKLDLKKLKTGVPPGIPQLPLTQQQMAPQAQSTAVL
ELLSRVSELDSDMADITQEHPADSVLGEEDGERTLEEKLRSETPAEHEPVSASSQIASSM
GINPHTLQIMKASLFADDDECDLFQEHGSSKLIQDVASPKVLLSGAGRQSIGALLQTKFT
SGGGLFSQFPEAPFSGIPQKLSKSLASESPWPSLGPSFLLPAPPPEPTLRTVGARRLGGP
VPLESSITLGKGHLLMDAALFRGRSFRVGWGPNWTLVHCGDQLSVTEAIKEQSAEIMGFG
FLPKPTKSKPITESPFKVRMEQVVGLEPKQSTESLALYHRPLEIGLKHSTINTEDYCPFI
QPAKGVDALHGYAEWIMEVNKDIGGGDACLAHWRQVWTLCAALWCRLGDRDVETEQYSDY
QQQLERRRSFSHWLSECAAECIEEEVGRALQRSNAEAIFRYLTGHCISKACKLSQKSGDH
RLALLLSQAVGSKFCRDLLALQLSDWNSMQTDSFIEEDRLRIFALLAGKPVWQSTDSCIN
VCSELDWKRCVAVHLWYMLPPTASVADALAKYESAFQGSEEVKRYACPPLPPYVDELELL
GLDEEMDETESKKPLYDICFHLLKLYSDRHYSLQQLLDHSTVTADHLDYRLSWHLWNVLQ
ALNYNHLSTSCQGLLHASYAAQLESAGLWEMAIFVLLHIPDSGLRESAVREMLNLHCSLE
ETEESMEKEQFLTEKLLIPIQWIHQAKAIRACRGGDKRSEALHLYKAGHWNHCHRLVIQH
LASDCIINDNHKYLLEFLEGLAVPERSVKIQDWDTSGRVYLDYIHVIQTLQDIQQMESPG
YELERLHTEVTSLCSRIERLPCSKAKDRLAQSEMAKRVANILRVVLSLQQGGEGTPDPRH
IPLCQLAPHIGRLPMPEDYALEELRSLTQSYLQEYVIGH
NT seq
5340 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaaatcttttggtgctccctttgggggagggacaggaggatttgggactact
tcaacatttgggcaacaaaatactggatttggagcaacaggaggctttggatcttcagca
tttggggcaacaaacaacacagggggactgttcgggaccacccagaacaaacctggtggc
ctatttggcccgagcaccttcagtcagcctgtcacatcctccaccagtagtgggtttggg
tttggtgctaccagtggcacatcaaacagcctttttggaagcaccaacactggaggtgga
ggattgttttcccagcagaataatgcctttggtgccaacaaaccagccaattttggcact
tttggtaccagcaccagtagcggtggattattcgggacaaccaacacaacatccaaccct
tttggaggaacatcaggctctttgttcgggtcatcaagtttcactgctgctccccctggc
acaacaatcaaattcaatccaccaactgggagtgacacaatggtaaaaggaggtgtgaca
accagcatcaacaccaaacaccagtgtatcactgccatgaaggaatacgagagcaaatcc
ctagaggaattaaggtttgaggattaccaggcaggaaggaagggtccttccaaccccatg
gcagctggcacgggtggcctctttggtgcaacagccacagctactcccagtactggcact
ggactctttggatcctcaactccaaacactggcttcagcttcggccagaacaagacctca
tttggcacaagcaccggggcctttggtacaactacaggaagtttgtttggccagccgcaa
cagcaacaacaacaacaacaacagcaacaacaacaacagcaaggttccagtctcttcaaa
ccatttggctcagctaccaccacccaaaacaacactttctcctttggcaacagcagcagc
atggggctgtttggcaacactgctgcctctcaggctggaggactgtttggaaacactaac
acaagtacggccacaggcttcggcacaggaatgttcggccaaacgaacactggctttggg
aatgtgggaacacagaatctttttggtaataagcctgctggatttggcgccaccacaact
agcgcaccctcctttggaacaggcactggtctgtttgcaaataagcctacgcttactcta
gggactaacacaaacgcctcaacctttggatttggtgcaactggtactggtgtgggtctc
tttgggagcaaaactgctacgacaggcctgggaacaggactgggaactggctttggagga
gctgtaggaactggccagatgtcattgtttgggaacaaccagaacaagctgggctccacc
ctaggctcagtgggcaccttcgggactggaggcttcaacactggagccaacactttgact
tttggtgctcctcaacagcctgtggctctgactgaccctaatgcatcagctgcacagcag
gctgtcctccaacagcagatcaatgcattggcctactctccttttggagactcacccctc
ttcagaaatccactgtcagacccaaagaagaaggaagagcgtctgaagcccacaaatcca
gctgcccagaaagccctgactacccctactcagtacaaactgacccctcgtcctgccacc
cgtgttcgtcccaaagctctgtcctcctcaggctcctccaaatctcagctctttgatgga
cttgatgatgatgaaccctctcttaacaatggagccttcatgcctaggaagagcataaag
aagcttgttttgaagaatctgaataacagcagtctgtataacagctctgtgaacagagag
gctgatgacttggcctctccttcagaatacccacaaaacggactcagtctgagtatggat
gaaggagagaccagagaagtaactgtggagagaagtggggaggatgatctggaggtctcc
aagttctacacaaacccgatcaccaaaccaattccacacgcccagccgagccccttgcta
caggacacaatctctgagttcaacatgcggggatctgccagtcatcgcaatggcctggag
gccagcagcgaggacatctctctagcagaggattccattcaggaggagagagatgaggag
ctggtggctctgaaacctcctcacccagctggtattgcgtcgggctcgtcatggggctat
ggatcagttttcttctctggtgaagtgaatcttaccaacatgaacctggatgagattgtg
cacttcaggcgtaaggagataattgtgtaccctgatgacaaagacaagcctcctgctgga
gagggactaaacggacgtgctgaggtgactctagatggtgtgtggcccaatgacaagaca
acatgctctcagattaagagtctagagaggctgactgagatgaactacgagggccggctt
gaggcagcctcgcgtaaacagggtgcccgcttcttggaataccgacctgaaactggctcc
tgggtctttgaggtggcccacttctcaaagtatggactccaggaatctgatgaagaagat
gaagtccccccggcaaagcttgatctgaagaagctgaagacgggtgttccacctgggatc
ccacagcttccgctgacccagcagcagatggcgccacaggctcagagtacagcagttctt
gagctgctcagccgtgtgtcggagttggacagtgacatggctgacattactcaagaacac
ccggcagacagtgttttgggtgaggaggatggagagagaactttggaggagaagctgaga
tctgagactcctgctgagcacgagccagtgtctgcatcgagtcagattgcttcctcaatg
ggcatcaaccctcataccttacagatcatgaaggcctctctctttgcagatgatgatgaa
tgtgacttgtttcaagagcatggttcttcaaagctcatacaggatgtggcttcccccaaa
gtcttgctttctggagctggtcggcaatcaattggagcccttttacaaaccaaattcacc
tcaggaggaggacttttttcccagtttccagaggctccttttagtggaatacctcagaag
cttagcaagtcactagcatcagaatctccatggccatcattgggtccttccttcctgttg
ccggcccctcctccagaacctactcttcgaactgtaggggcccgcaggctaggtgggcca
gtccctctggagagctccataactctaggaaaaggccatctgctgatggatgctgctttg
ttcagagggcgatctttcagagtgggctggggtcccaactggacactggtgcactgtgga
gatcaacttagtgtcacagaggcaattaaggagcagtcggcagagatcatgggatttggt
ttcttacccaaacctaccaaaagcaaaccgatcactgaaagtccatttaaagtgcgtatg
gagcaggtggtcggcctggagcccaaacagtcaacagagagccttgctctgtatcacaga
ccactggagatcggtctaaagcacagcacaatcaacacagaggactactgtcccttcatc
cagccagcaaaaggagtggatgctctgcatggttatgcagagtggattatggaagtcaac
aaagatataggaggaggggatgcttgtctggcccattggcgccaagtttggaccttgtgt
gctgctctttggtgtcgtcttggtgaccgggatgtggagactgagcaatactccgattac
cagcagcagcttgagaggcggaggagtttctcgcactggctctctgagtgtgcggctgaa
tgcattgaggaggaggtgggccgagcccttcagcgcagcaatgctgaggccatattccgt
taccttaccggccactgcataagcaaggcctgcaaattgtcccagaagagtggggaccat
cgtcttgctctgttactgtctcaggctgttggctctaagttttgtagagatctattggct
ctgcagctcagtgactggaacagcatgcagacggactccttcatagaggaggacaggctg
cgaatatttgctttgcttgcaggaaaaccagtgtggcagtcaacagacagttgtataaac
gtgtgctccgagcttgattggaagcggtgtgttgctgtccatctctggtacatgctgcct
cccactgcatctgtagctgatgcactcgccaaatatgaatctgcgtttcagggttcagag
gaagtgaaaaggtatgcttgccctcctttacctccttacgtagatgaactcgagttgttg
ggtttggatgaagagatggatgagactgaatccaaaaagccactctatgacatctgcttc
cacctgctcaaactttacagtgacaggcactatagcctacaacagctacttgatcacagc
acagtaactgctgatcatctggactaccggctgagctggcacctgtggaacgtattgcag
gctcttaactacaaccacctgtccacctcatgccagggcttgctgcatgccagctatgct
gcccagctggagagtgcgggattatgggagatggcaatcttcgtgctgctgcacatacct
gactctgggcttagagagagtgcagtgagagagatgctcaacttgcattgctcccttgag
gaaacggaagaatcaatggagaaagagcagtttctcacggaaaagttgctgatccccatc
cagtggatccatcaggccaaggccatccgtgcttgtagagggggagacaaacgtagtgag
gctttgcacctttacaaggccggccattggaatcactgccatcggcttgtcatccagcac
ttggcctcagactgcatcattaacgataatcataagtaccttctggaattcctagagggg
ttagcagtgccagagcgcagtgttaagattcaggactgggacacgtctggacgagtctac
cttgattacatccatgtcattcagacgctgcaggacatccaacagatggaaagcccaggt
tatgagctggagcgactgcatacagaggtgacgtctctctgcagtagaatagagcgcctc
ccctgctccaaagctaaagaccgacttgcacaatcagagatggccaaacgtgtggctaac
atccttcgggtggtcttgagtctccagcaaggtggtgaaggcaccccagatccccgacac
atccctctttgccagcttgctccacacattggacgtctacccatgccggaggactatgct
ttagaggaactccgcagccttactcagtcgtacctgcaagagtatgttatcggtcactga
DBGET
integrated database retrieval system
