Sinocyclocheilus anshuiensis: 107689224
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Entry
107689224 CDS
T04917
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh04510
Focal adhesion
sanh04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107689224
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107689224
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
Laminin_I
F5_F8_type_C
LPD3
Laminin_II
Motif
Other DBs
NCBI-GeneID:
107689224
NCBI-ProteinID:
XP_016342638
LinkDB
All DBs
Position
Unknown
AA seq
1772 aa
AA seq
DB search
MWILQITALTISIALHTLAQVPDHNDKCAEGSCYPATGDLLIGRAHRLAVSSTCGLDGPD
RFCIVSHLQDETDCFECDSRRMYNEFTNPNSHTIENVVTTFAPNRLKTWWQSENGVENVT
IQLDLEAEFHFTHLIMTFKTFRPAAMLIERSADYGRSWQVYRYYAFHCTESYPHVPQGPI
RKVDDVICDSRYSGIEPSTEGEVIFRALDPAFKIPDPYSPRIQNLLKITNLRIRMEKLHT
LGDDLFDDREGVKKKYYYTLYDMVVRGNCFCYGHASKCAPVGNEAGVEGMVHGHCMCNHH
TTGLNCEECEDFYQDLPWRPAVGRETNACKRCECNHHSYSCHFDMAVYLSSGNRSGGVCD
DCQHNTEGQWCENCKPFYYRHPGRNIRDPRICEPCDCDPRGSLNGGLCDSATDVLRDMIA
GQCRCKANVEGQRCDHCKKRHYGLSDDPLGCRSCSCNPLGTLPAGSPCDIQTGSCYCKRL
VTGRNCDQCLPQHWGLSNDMDGCRPCDCDVGGALNNNCSRETGQCACKKHMFGRRCDQVH
SGYYFAALDHYIYEAEDASFGAEVKVLQRPSSLDRKPTWTGKGFANVPEGETLRFNIYNL
PRSMEYNLMIRYEPLLPDEWEQVVVQIERPRGTYPAAHCTSTYNDEQTVSLHPGSRYAVL
PGPVCLEKGQNYTAKISFPQYSSYSYHSSPHTLVDSIVLLPEVQDLDLFSGGPQQREDWE
MFQKYRCMERSQSVIKIPLMDICRDYIFSVSALLHNGALECKCDPQGSLSTVCDNIGGQC
QCRPNVLGRNCNTCAPATYLFGPSGCRPCDCNPLGSQNLFCHPTTGQCLCVSGAYGQQCG
NCKPNHWGFPQCQPCFCNGNSEQCHPVTGECLNCRGHTTGHNCERCESGYHRNTLLGSSE
PCRPCMCPNGPGSGMQFAESCYQNFNSLQMVCVCSSGYKGPKCEECASGYYGNPQVPGGR
CHPCQCNRNINMQDPESCDARTGACLKCLFHSDGNACQYCSRGYYGDARTQNCRRCMCHL
VGSSRQRCVDGLCECDRVSGQCPCLPGVVGQHCDRCAPNTWNINSGKGCQPCQCHPEHSY
TSSCDLLTGQCSCKPGFGGRTCEECRELFWGNPEVQCHACNCDPRGIATQQCNMMTGECV
CVEGVAGRRCDSCGRGYVGTFPDCEACHLCFREWDVNVGELTNHTQRLVDTVEEIKETGV
ATPYKDIISSLDDETKQLRQILEDDKVQQTLTHMQRMLQQANETASLLRKSMDRSVTDLE
KVSADHQQAVENLKSLTEEAQNLQEISSDKQQQVLNIKHSDPRGAADSIREYYRESGEAE
FRVNQAVSDPESTVKESAQIRKAAEAKLDSTEKEFNLKHQLHLQRLDKIGSELDSADLSR
LSHQVCGGASGLDGCGNCGGLGCVSEDGTSQCGGEGCETIVTRYQKVLNEAKNSDQEVLH
ALREVDELNKMVSDARGRADEAKLNAQDVLLRANQSKARVEQTNEELRDLIHQIRDFLTN
ETDPKRIEEVADEVMKLSLPVSPGALKNVTTEIRQHVARLTQVEDILTQTAENAHTAERL
LQEAQAANETATALKQATDEAKETLEDTERAQTAAGEKLKEVERDVNQTKQQITDVQSKT
EATEFKLSSSTGRFLDLEREVDELQQKTLETSSSADETQRQTEYITAEIDHTEREIDSLV
QPKYQLANGLIDQKAAGVVDARQKAEKLRQEAKDLLIDATSKLQRLRELERSFVLNQHIL
VEKAQELDGLENEARDVLQELSQKITIYSTCA
NT seq
5319 nt
NT seq
+upstream
nt +downstream
nt
atgtggattctccagattacagctcttacgatatctattgctttgcacaccctggcacaa
gtacccgatcacaatgacaagtgtgcagaggggagctgttaccctgctacaggtgatttg
ctgataggaagagcacatcggcttgcagtctcctccacctgtggactggatggaccagat
agattctgcattgtcagccatttgcaggatgaaacagactgttttgaatgcgattctcgg
cgcatgtacaatgagttcaccaaccccaacagccacaccattgagaatgtggtgacaact
ttcgctcccaaccgcctcaaaacctggtggcagtccgagaacggagttgaaaatgtgacc
attcagctggatttggaagccgaattccacttcacacacctcatcatgacctttaagacc
tttcggccggcagccatgctgattgagcgttccgcagattatgggcgaagctggcaggtg
taccgttactacgctttccactgtactgaatcctatccgcacgtccctcaggggccaatc
agaaaagtggatgatgtcatttgtgacagccgctattcaggcattgagccatcaacagaa
ggagaggtcatttttagggcacttgatcctgcatttaagattcctgacccttacagccca
cgcattcagaacttactgaagattacaaacttgcgcatacggatggaaaagttgcacact
ctaggtgatgatctgtttgatgaccgagagggggtgaaaaagaaatactattacactctc
tacgatatggtcgtccgtggcaactgtttctgctatggccacgcctccaagtgtgcaccg
gtcggcaatgaggcaggggtcgagggcatggttcatggtcattgcatgtgcaatcaccac
actactggactgaactgtgaagagtgtgaggacttttaccaagatctgccctggagacca
gcagtgggtcgagagacaaatgcatgcaagagatgtgagtgtaaccatcactcgtattcc
tgtcattttgacatggcggtgtatctgtcatcgggaaataggagtggaggagtgtgtgat
gactgtcagcacaacacagagggccaatggtgtgagaactgcaaacccttttactacagg
caccctggcagaaacatcagagaccccaggatctgcgagccctgtgattgtgacccacgt
ggttctctgaacggaggcttatgtgacagcgctacggatgttttaagagatatgattgcc
ggacagtgtcgttgcaaagctaatgtggagggacaacgttgtgaccactgtaaaaagaga
cattatggcctcagtgacgacccattaggctgtcggtcatgcagctgtaatcctctaggc
acactcccagcaggaagtccctgtgatatacagacaggaagctgttactgcaaacgtctt
gtgactggacgaaattgtgaccagtgtctgccgcagcactggggtctcagtaatgatatg
gatggctgcagaccatgtgactgtgacgtaggtggggctttgaataataattgttctcgg
gagacaggacagtgtgcttgtaagaagcatatgtttggtaggcgatgtgaccaagtgcat
tctgggtactactttgcggcactggaccactatatttacgaagctgaggatgcttccttt
ggagcggaagtaaaagtgcttcagagaccgtcatccttggatcgtaaaccaacctggacg
ggtaaaggatttgcaaatgtaccagagggtgaaacactgaggttcaacatttacaattta
ccacgatctatggagtacaacttaatgatccgctatgaaccactgttgccagatgaatgg
gagcaggttgtagtacagatagagcggcccagaggcacttacccagcagcacactgcact
tctacatacaacgatgagcagaccgtctcactgcaccctggatccagatatgcagttctg
cctggcccagtgtgtttggagaagggtcagaattacacagcgaaaattagcttcccacag
tactcatcatacagctatcactcttctcctcacacacttgttgattcaatagtgcttttg
ccagaggtacaagacctggatctattttctggcggaccccagcagcgggaggactgggag
atgttccagaaatacagatgtatggaacgcagccagagtgttattaaaatccccctaatg
gatatttgcagagattacatcttcagtgtgtcagcactactacacaatggagctcttgag
tgtaagtgtgacccccaaggttctctgagcacagtgtgtgacaatatcggtgggcagtgt
cagtgtcgacccaacgttttaggaaggaactgcaacacctgtgccccggccacctacctg
tttggaccctcaggatgtagaccatgtgactgtaacccactgggctctcagaacctattc
tgccaccccaccacgggccagtgtttatgcgtgtcaggggcatatgggcagcaatgtggc
aactgtaagcccaaccattggggcttccctcaatgccagccctgcttctgtaatgggaac
agtgaacagtgccacccagttacgggcgagtgtctgaactgcaggggtcacaccactggc
cacaactgtgagaggtgtgaaagtggttatcaccgtaacacgctgctgggctccagtgag
ccgtgtcgcccttgtatgtgtcctaacggacctggaagtggaatgcagttcgctgaaagc
tgttaccaaaatttcaactctctccaaatggtgtgtgtctgcagctcaggctacaaagga
ccaaagtgtgaggaatgtgcctctggttactatggtaaccctcaggtcccaggagggcgg
tgccatccgtgtcagtgtaacagaaatattaacatgcaggaccctgaatcatgtgacgcc
cgcactggtgcctgtctcaaatgcctgtttcactccgatggcaatgcgtgccagtactgc
agtcgtggttattatggagatgcccgtactcagaactgcaggagatgcatgtgccatctc
gtgggaagttccaggcaaagatgtgttgacggcttgtgtgagtgtgacagggttagtggc
cagtgcccatgtctgcccggtgtggtgggtcagcactgtgaccgctgtgcccccaacaca
tggaacataaacagtggcaaaggatgccaaccttgccagtgccaccctgaacattcttac
acgtcctcctgtgatctgctgaccggtcagtgttcctgtaaacctggttttggaggcagg
acgtgtgaggagtgcagggaactgttctgggggaatcctgaggtccagtgccatgcatgc
aactgtgatcctcgaggcattgctactcagcagtgtaatatgatgaccggcgagtgtgtg
tgtgtagagggtgtagccgggcggaggtgtgactcatgtggacgtggctacgttgggacc
tttcctgactgcgaggcctgtcatctgtgtttccgtgaatgggatgttaatgtgggagag
ctgaccaatcacacgcagagactggtggatacagtggaggaaattaaagagactggcgtg
gctacgccctataaagacatcatatcgagtctggatgatgaaaccaaacagctcagacag
attctggaagatgacaaggttcagcaaacgctcacacacatgcagaggatgctgcagcaa
gccaatgagacagcatcactcctgagaaagtctatggaccgatctgtaacagatctggag
aaggtatctgctgaccatcagcaggccgtggagaacctaaaaagcctgactgaggaggcc
caaaacctacaagagatctcctctgacaaacagcaacaggttctgaatattaaacattca
gaccccagaggtgcggcggacagcatcagagagtattacagggaatctggcgaggccgag
tttcgtgtcaatcaagctgtctctgacccagaaagtacagttaaagagtctgcccagata
cggaaagctgcagaggccaaattagacagcacagagaaagaatttaacctgaaacatcag
ctgcatttacagaggctggacaaaattggatctgaactggactccgcagacctttcacga
ctaagccatcaggtgtgcggaggggcgtcaggtctagatggttgcggtaactgtggtggt
ctgggatgtgtgagcgaggatggcacatcccagtgtggtggggaaggatgtgagaccatt
gtgacacgataccaaaaggtcttgaacgaagccaaaaactcagaccaagaggtcctgcat
gctttaagagaagtagacgagctaaacaagatggtgtcagatgctcgaggacgtgcggat
gaggccaagctcaatgctcaggatgtgttactgagagccaatcagagcaaagcacgagtg
gagcagaccaatgaggagctcagagacctcattcatcaaatacgagacttcctcacaaac
gaaactgatccgaagcgtatagaggaagtagctgatgaggtgatgaaactgagtttgcca
gtgtcgcccggtgcactaaagaacgtgaccacagagatccgccaacatgtggccagactg
acccaggtggaggatattctgacccagacggcagagaatgcgcatactgcagagagactc
ctgcaagaagcacaggctgccaatgagacagctacagcactgaaacaggccactgatgag
gcgaaggaaactctagaggacactgagcgcgctcagactgctgccggcgaaaaactgaaa
gaggttgagagagacgtgaaccaaacaaaacaacaaatcactgatgtacaatcaaaaacc
gaagcgactgagttcaaactaagtagcagcacaggaaggtttctggatcttgagagagag
gttgacgaactccaacagaaaactctagaaacatccagcagtgcagatgaaactcagaga
caaactgagtacatcacagcagaaattgaccacacagaacgggagattgactcactcgtg
caacctaagtaccaactggccaatggtctgatagatcaaaaggcagcaggtgtggttgat
gcacgtcagaaggccgagaaactacgccaggaggcaaaagatctattaatagatgccaca
agcaaactgcagagactgagagagctggagagatcatttgtgctaaatcagcacattctg
gtggagaaagctcaggagctggatggactggagaatgaggccagagatgtactgcaagaa
ctcagtcagaaaatcaccatctacagcacctgcgcttaa
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integrated database retrieval system