Sinocyclocheilus anshuiensis: 107690060
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Entry
107690060 CDS
T04917
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein-like isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
sanh
Sinocyclocheilus anshuiensis
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanh03019
]
107690060
03036 Chromosome and associated proteins [BR:
sanh03036
]
107690060
Messenger RNA biogenesis [BR:
sanh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107690060
Chromosome and associated proteins [BR:
sanh03036
]
Eukaryotic type
Gene silencing
piRNA pathway
107690060
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
107690060
NCBI-ProteinID:
XP_016343776
LinkDB
All DBs
Position
Unknown
AA seq
2003 aa
AA seq
DB search
MEDKKRKKEDKRKRETSQKVAEQKNKVPELTKPPSAQSPATPNSASPSPGPVPSSTPSAA
TPAAGALPQGGNNAKRPAVANGQPSPATQNSQRYMPREVPPRFRCQQDHKVLLKRGQPPL
SSMLLGGGNSGGDSPNETVASASEVMQVWNGIDPSQGLVGPAAPSLPHTSSSSSIAASSS
SSNYANSMWGNSSGSQPLSQGREKVIVDRSDLEEWPSIAAGDGSKAGDTAGTGGADSSGI
LNCSTSWGERHLQQQAKVVGGGNGRKGVNSGSPSPPTSSGSPNECMQSGSVWASSSHELI
GGNAVAAGSFPPISKAAPLPGSSDSSLGVSCGIPGANFTPNANPSAWPALVQEGAGTVAT
EGGSSSLQSSSLSASNPLSVNQDSHQHQLHQIQSRDREPSCGEWGGAALEAGAGPKNTGV
AEGADMDSGSTGGGDGSTSSSSSTSSSLWRAQPFPADSKTGASRTESWEDGAGGSSVSAE
GRKAWGYASQDDRGDLTRGSAWGTGSGGQTPGVSQGAWGRDHMLVGEWGASSGVGGVSNP
GGKDGSSSNSSSGGGSVGNPTTSSSTPSNMTRAWDNQKGVGDVGAGDSSEWGGQGSRGGE
CTSSSSGGGNSRSGNQHHGHHRAHQPPNPEVTLQNLLSRSDLDPRVLSNSGWGQTQIRQN
VAWDLEGGGGAAAPGGAESSSTMSAPAHAQPYSGPSTTTTTDPSSSSLLQGAALNANLNS
NSILGPPAVSPGEGWDNSSSNSSSSLHARSSPPSGVNIQNPGVSQSVSCLVGGQGKPSGG
WGGTASSEGHGKGWDSEGHEWRECRAGSSSGRWGDFQTQGTPSTGGSGWGDSQEEKGTGG
WKEMGRGDAGNRGTRGSSDWGENEPKSCSGGWGDGKSGGGTSGDSEVGTWGNWDEGAPRG
SWGTGGKGAGGDMGGKSHQGWGGKMHPSQMPNSQSASQKGPAQQQQQQQQSQPQQCQSVD
TGAMQGGWGRPAGPSAQSQSSGWTSGPIPQVSSDSGDTSEPSGWEEPSPQSISRKMEIDD
GTSAWGDPNNYNNKSVWDKNNAPSGQAQSVSPQQGPPTLQQQPPGRMPTGLGNRDMNLPH
STNKGPGIASSGWGGSGSPSSPCVDNSTAAWGKSTEAPTNWCNTDDTGKAPGWGDSSPSP
VKSGSKSMQEGWGEGEGSVSASRHSSWEEEDESGGGVWNSAGSQGSSSSYNSGGWGAKKG
NKGSLKGAGDSWMNPMTRQFSNMGILGEDPSGRSLDLAPGPPQDKKMEGEKRGMGLNEYN
GEMRKGGRGGGAGVIFRSPGSKEMGACEPGPYYDKASGQLFSSGGGMAQSRHQPGVPPVN
PSVRAQVPHQFLSPQVPGSVLKQMPPPSGGVGGGIFPPQLSPQHIAMLNSIYPPHIQFQL
ACQLLLQQQPQQQQQQQLLQNQRKFPPNIRQQADPQQLARIMAVLQQQRQQQQQHVGGPG
GSSKLSPSHLGGSGPKMPMLDPLSHPGLAGSVADLHQKTQGTYSGFGPGVSLPGLELGPM
VGGPAGLKDSGGQQSRFKWMMEGHSPAPSPPDSTLHKNGPIAAPLKMRGSSPYSQYEMLG
GEGLGVPPQGPSDHWHRSPGNKMGAKTGTSSWPPEFQPGVPWKGIQSVDPESDPYMTPGS
MLGSTMSSLNDTEHQLLRDNTESNPSLNTLLPSPGAWPYSASESPLNNAHNPAKYTDYKP
SWPLEPIGHNKPWKTNRNSSHLPRPPPGLTHQKQPSVSPWTGGGPRLGRGWGGTGGGQEN
RFGPGSAWSDGGASKGSCWLVLSNLTPQIDGSTLRTICMQHGPLLTFHLGLTQGSALIRY
STRQEAAKAQSALHMCVLGNTTILAEFVSEEEVARYFAHSQTGAGGSGSGGGGAGGVAVS
GPAGVTGSSGAGVVGTISAGSGERERAGVGSLTTGGSNNAGGTGPSGSTWQSLEGTGSSP
DPASAQGAGLSVFTQWSSNGAGGSVGSNTGGVDPGRAGLWSGMTPGYTSSSLWGSPAMED
RHQMSSPAALLPGDLLGGGADSI
NT seq
6012 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaagaaaaggaaaaaggaagataaaaggaaacgggaaacctcacagaaggtt
gcagagcaaaaaaataaagtgccagaattgaccaagcctccatctgcacagtctcctgcc
acccccaactcagcttcccccagccctggccccgtcccctcttcaaccccatccgctgcc
accccggctgctggcgccctccctcagggtgggaacaatgctaagcggccggcggtggcc
aacggacagccctcccccgccacacagaattctcagcgctacatgccccgtgaagtgccc
cctcgattccgttgccagcaggaccataaagtgctactgaagaggggccagccaccactg
tcctccatgctgctggggggaggcaacagcgggggagacagccccaatgaaacagtggct
tctgcctcagaagttatgcaggtttggaatggcatagatccaagccagggccttgtgggt
ccagctgctccctcactgccccatacatcatcctcctcatcaatcgctgcttcttcttct
tcttcaaattatgcaaattccatgtgggggaacagctctggcagtcaacccctctctcag
ggcagggaaaaggtgatagtggaccggtcagacctggaggaatggcccagtattgctgct
ggggatgggtcaaaggcaggggatacagcaggtaccggaggtgcggacagtagcggaatt
ctgaactgcagcacctcatggggtgagaggcatctccagcagcaagcgaaagttgtggga
ggaggaaacgggagaaaaggagtgaattctggcagcccttccccacccacatcctccggt
tcacccaatgaatgtatgcagtctggtagtgtttgggcttcatcctcccatgaactcata
ggggggaatgcagtagcagcaggctcatttccccccatatctaaagctgcccctctccca
gggagctccgatagctcccttggtgtcagctgtgggattccaggtgccaattttacccct
aatgccaatccctctgcttggccagccctggtacaggaaggggctgggacagttgcaaca
gagggtggctcctcttccctccaaagctcatctttgtctgccagcaaccctctttctgtg
aatcaagactctcatcagcaccaacttcaccaaatacaatccagagacagagagccatcc
tgtggagagtggggtggtgcagcactggaagcaggagcaggaccaaaaaacacaggggtg
gcagagggggctgatatggactctggaagcacaggtggaggggacggctccacttcttct
tcctcctccaccagctcatcattgtggagagctcagcctttccctgcagactccaaaacg
ggtgcctcaaggactgaatcttgggaggatggagcaggagggagctccgtgtctgctgaa
ggcaggaaagcgtggggttatgccagtcaggatgatcgaggagatttgacgaggggaagt
gcatggggaacaggaagtgggggtcagacccccggggtatctcagggagcgtggggtcgg
gaccatatgttggttggggagtggggggcgtccagtggtgttgggggtgtcagcaatcca
ggtgggaaagatggttcgagcagtaacagcagcagcggcggcggcagtgtcggtaacccg
acgacttcctcctccacaccttcaaatatgacaagagcttgggacaatcagaaaggagtt
ggggatgtaggagcaggagactcgagtgagtggggaggccagggtagcagaggtggggaa
tgtacctcatcctccagtggcggaggaaactccagaagtggcaatcagcaccatggccac
caccgcgctcatcaacctcccaaccctgaagtgaccttacagaatctgcttagccggtct
gacctggaccccagagtgctgtccaactctggttggggtcagacacaaatccgtcagaat
gtggcatgggatttggagggaggtggcggagcagcggcaccaggtggagcagaatcctca
tctacaatgagtgcacctgcccacgctcaaccgtactctggtccatctaccaccacaact
actgatccatcttcctcctctctgctccaaggtgcagctctaaatgccaacttgaactca
aactccatcctcgggccacccgctgtttcacctggtgaaggttgggataacagtagtagc
aacagcagttcttctttgcatgccagaagctctccaccctcgggtgtcaatatccaaaac
cctggcgtctcacaatctgtgtcgtgtctcgtcggtggacaaggcaagccatccgggggt
tggggagggactgcttcatcagagggccatgggaaaggttgggacagcgaaggacatgag
tggcgagaatgtagagcagggagctcgtcaggcaggtggggagatttccaaacacagggt
actccatcaactggaggaagtggctggggagacagtcaggaggagaaaggaacaggcggt
tggaaagaaatgggacggggggatgcgggcaataggggaacgagaggtagcagcgactgg
ggagagaatgagcccaaatcatgcagtgggggttggggggatgggaagagtggtggaggt
actagtggggactcagaagtgggtacatggggtaattgggatgagggagctcctagaggg
tcatggggaactggaggtaaaggggcaggtggagacatgggtggcaaatctcaccaaggc
tggggtgggaagatgcacccgtcacagatgccaaacagccaatcggcctcacagaaaggc
ccggcacaacagcagcagcagcaacaacaatcacagcctcagcagtgtcagtcggtggac
acaggggccatgcaagggggctggggaagaccagcaggtccttcagctcagagccaaagt
tcagggtggacttcagggcccataccccaagtttccagtgactctggagacacatcagag
cccagtggttgggaggagccttctccacagtccatcagcaggaaaatggagattgatgat
ggaacatctgcttggggtgaccccaacaactacaacaacaaaagtgtgtgggataagaac
aatgccccatctggccaggcacaatcagtgtcccctcagcaaggacccccaaccctacag
cagcagccacctggaagaatgccaactggccttgggaatagggacatgaaccttccacat
tcaacaaacaaggggccaggaatagcttcttctggatggggaggtagtggctctccttcc
agtccatgtgtggacaacagtactgcagcctggggtaaatctactgaagcacccactaat
tggtgcaacaccgatgacactggcaaggcaccaggttggggggattcctctcccagtcca
gtgaagtctggttcaaagtctatgcaagaaggttggggtgaaggagagggatcagtcagt
gcttcacgtcactccagctgggaggaggaggatgagagtggtggtggtgtatggaacagc
gctggttctcaaggcagcagctcgtcctacaactctggaggctggggagccaagaagggc
aacaagggttccttgaagggtgcaggagactcttggatgaacccaatgacaagacagttt
tcaaacatggggattctgggagaggaccccagtggtcgttctttggatctggcccctggt
cctccgcaggacaaaaagatggaaggagaaaagcgtggcatgggcttaaatgagtacaat
ggagagatgcgtaaaggaggacgtggagggggagcaggagtaatcttccgttcacctggt
tccaaagagatgggggcatgtgaacctgggccttactatgacaaggcgagtggtcagttg
tttagtagcggaggtgggatggcacagtccaggcaccaaccaggggtgcctcccgtcaac
ccatctgtacgagcgcaagtgcctcatcagttcctgtcaccgcaggtgccaggctctgtg
ctgaagcagatgcctcctcccagtggaggtgttgggggaggcatctttcctccacagctt
tccccacagcacattgccatgctcaacagcatatacccccctcatattcagttccaactg
gcctgtcagctgctacttcaacagcaaccacagcaacaacaacagcagcaactgctgcag
aaccagcgcaagttccccccaaacatacgtcaacaagcagacccacaacagcttgccaga
atcatggctgttcttcagcagcagagacaacagcagcagcagcatgtgggaggcccagga
ggcagctcgaaactctctccttctcaccttggtggtagtggtccaaagatgccaatgttg
gaccccctctcacaccctggcttggcaggatctgtagcagacctgcatcaaaaaacacaa
ggaacttattctgggtttgggcctggagtgagcctccctggtctggaattgggtcccatg
gttggtggcccagctgggcttaaagacagtggggggcagcagtctcgtttcaagtggatg
atggaaggtcattccccagccccctcacctcctgatagcactctccataaaaatggtccc
attgctgctcctctcaaaatgagaggcagttccccatattcccagtatgagatgctggga
ggtgagggtttgggtgtgcctccacaagggccatcagatcactggcacagaagtcctgga
aacaagatgggcgccaagactggcacatccagctggcctccagagttccaaccaggagtg
ccttggaaaggaattcagagtgtggaccctgaatctgatccttacatgacccctggaagt
atgctgggctcaaccatgtcaagcctcaacgacactgagcaccagttgttaagagacaac
acagaatcaaatccctccctcaacaccttgctgccttcacctggtgcctggccctacagt
gcctcagagagccccctcaacaatgcacacaacccagctaagtacacagactataagccc
agttggccacttgagcctatagggcacaacaagccttggaagaccaatcgcaacagctct
catctgccacgcccacctcctggactgacccatcagaaacagccctccgtttctccctgg
acaggaggaggcccacgattgggtagaggctggggtggcactggaggcggccaagaaaac
agatttgggcctggttctgcgtggagtgatggaggagcctctaaggggagctgctggctg
gtgttgagtaatcttacccctcagattgatggctccactttgaggactatctgtatgcag
catgggccgcttttgacctttcacctcggtttgactcaaggtagtgctctgattcgctac
agtactcgccaagaagcagccaaagcacagagcgcacttcacatgtgtgttttaggtaac
accacaatcctggccgagttcgtaagcgaggaggaggttgctcgctattttgcacattcc
cagactggagctggcggaagcggcagtggaggtggcggagctggtggcgtagccgtctcc
gggccggcaggtgtgacagggtcatcgggggccggagttgtgggtaccatcagcgctggg
agtggtgagcgagaacgggctggagtgggaagtttgacgacaggaggaagcaacaatgct
ggtggaactgggccctctggctctacctggcagagtttagaaggtacaggcagctctcct
gaccctgcctctgcccagggagcaggcctaagtgttttcacccagtggagcagcaacggt
gctggtggaagtgtgggcagcaacacagggggcgttgatcctggcagggcggggttgtgg
agcggcatgactccagggtacacaagcagcagtctgtgggggtctccggccatggaagat
cggcaccagatgagcagccctgcagcactgttgcctggagacctgctgggaggaggtgca
gactctatctga
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