Sinocyclocheilus anshuiensis: 107691614
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Entry
107691614 CDS
T04917
Name
(RefSeq) LIM domain only protein 7-like
KO
K06084
F-box protein 20
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
107691614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sanh04121
]
107691614
Ubiquitin system [BR:
sanh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107691614
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ_6
PDZ
PDZ_2
Motif
Other DBs
NCBI-GeneID:
107691614
NCBI-ProteinID:
XP_016345787
LinkDB
All DBs
Position
Unknown
AA seq
1409 aa
AA seq
DB search
MSLFFGVIAAVMEWRQQSAVSCELAFQEAQRWLEEVTKKRFGSKSFRVALEDGVLLCDLI
NTLKPGIIKRVNRLSTPIAGLDNVNVFLKACEKLGLNEAQLFHPGDLQDVSTRVTVRENH
CSVIPVYTTKVLITIYWLGRKAQSDPFYTGPQLNLKAFEGLLGTALSKALEESVQAKSSV
RDSGYAEGWFSDREDLFSLKQSGYRREDSVESMDSVESRTLSVASDCTLRVGSEGCCSDA
EAEHCFRMAEGSKSDAPIRERVHVPSALRKKRQEYQQGGRSYAGNFTSESGRGLCHDLPP
ASAFLQWASSYQSDSDSDADRAEPDLVQDDLASRRFRSVTSVAPANFAIPSKPLGPRLAP
MVTPSARKSWLTLSDASRLAAVPPQRSNQSVSSIPSVNGRADFETATLEEEFLQRALNNG
TSDSDEDRGNADPVLDDLYVRRVLVSEHQTSINADSDKFLPKYWTPEEDLHVKKIRLGSQ
RRPWYKKMQGFRSKSMGDVTLEPIPQESDTCSSFDQMGSRHIHQRSVGEVTLDPSAIQRI
QQEQLQSIRDRIKESEAKWHEDLNRWKSRRRSANSDLHKKREEREQIELINSGGGASAIM
TAQLTGMPEESSNMPGPMSDAGSSVSSTGWSTTLTLPLTNGTSALTRGTDAETTDSAGEF
FTPPSAVVSEQSSLTSLATMDPEPYEQQSPDFSCRASLLESFYAGRARVSATLPRGFRRS
EGSSRLFTGVTPRPFGAKPSKVSSLPRVYSMDDSHKSLISGNRDHSIIPSFLSGQGKVTA
SADMGHFRSSTHPIKKEEEERRDGRLSAPPINSFVTKVTMAASNIQTSPPAVSEIRDIKV
GQSEMRVCLNQKPNSGRDFGFKAHWDSTGACVKSVQAGSPAELCGLLMGDEIVALGGCRV
AEINYEQFKGSMNTAQQKGTLLMDIRRHGQNDWGSDQPFLPYKSHKTINLTSANSTLIGR
PEQYVSINTTSQVETMVKTQVNGQPANGVLPKMVNGRIQDNPVSLRNKGGSESAISDLQV
PSISTTSSRWSWDHEEERRRQEKWQMEQERLLQEKYRRDQEKLEEEWRRAQQEVYGEEHS
GTEEQKCTYVLSNGNATCIPSPFFNQSIATTSVASKQNAEKVEATQNRQSSVQTAAAQQS
LKAEVECDSTTKSQCSEESYGFAKLTVSDRTKSKSTPALQGLHKQDAKAGSGKKKGQLSQ
AEKERLQILEEMRKKTQLLTDNSWIRQRNASINKEPITVGTSIRRYESLDNLHSTNSSWS
RQSYTSSVANRHHYALGNPGTYRSGRSSLGPDSAIFSTGLKQSSNSPTPPITTMPEPSVP
KSRPNSQQRGRLVSGRRMCSRCERPLGKGAAMVIDSLELCFHIGCFKCVSCRTDLGRGAE
SGAQVRVRHGQLFCNTCYSRVRVCSSISK
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttttctttggtgtgattgcagcggtgatggagtggcgtcagcagtctgcagtc
agctgtgagctggcgttccaggaggcgcagagatggcttgaggaagtgacgaaaaagcgt
tttggaagtaaaagctttcgagtggccttagaggacggggtccttctgtgcgatctgatc
aacacattgaagccaggcatcattaaacgagtgaacaggctctccactcccattgcaggc
ttggacaacgtgaatgtgtttctgaaggcttgtgagaagctagggcttaatgaagcacag
ctcttccatcctggagatctgcaagatgtgtccacacgtgtgactgtcagagagaaccac
tgctctgttatccctgtctatacaacaaaggttttgataactatatactggttggggagg
aaggcccagtctgatccgttttacactggaccacagctgaatctaaaagcctttgaaggt
ttgctgggcacagcattatctaaggctctggaggagtctgtgcaggccaagtcgagtgtg
agggacagtgggtacgcagagggctggttctctgacagggaggatctgttcagtctgaag
cagtcgggctacaggagagaggactcagttgagagcatggactcagtggagtctcgcaca
cttagcgtggcttcagactgcacacttagagtcggcagtgaaggttgctgtagtgacgca
gaagcggagcattgcttcaggatggcagaaggcagtaaaagtgatgcccccatcagggaa
agagtgcatgtcccatctgccttgaggaagaaaaggcaggaataccagcagggaggcagg
agttatgcaggcaacttcactagtgaaagtgggaggggcttatgccacgacctccctcct
gcttctgccttcctccaatgggcaagcagttaccagagtgacagtgactctgatgcggat
cgcgctgaaccagaccttgtgcaggacgacctagcgagtcgcagatttcgctctgtaacc
tccgtggcccctgcgaactttgcgatcccttcaaagcctctaggacccaggttggcccct
atggtgaccccaagtgctaggaagtcatggctcaccttgtcagatgcctcacggctggcc
gcagtgccgccccagagatcaaaccagagcgtgtcatccattccctctgtaaatggacgg
gcagactttgaaacagccactttggaggaagagtttcttcagcgagccctaaacaatggc
acgagtgactctgatgaggaccgaggaaatgccgatccggtgctggatgacctttacgtc
cgtcgggtgctcgtctcggagcatcaaacctccatcaatgccgattcagacaagttcctg
cccaaatattggacacctgaggaagatctacatgtgaaaaagatcaggctagggtcccag
cgcagaccatggtataagaagatgcagggcttcagaagcaaatctatgggtgacgtcaca
ctggagcccattccacaggagtctgacacctgctccagctttgaccagatggggtcacgg
catattcaccagaggtctgttggagaggtgacccttgacccctcagccatacagagaatt
cagcaggagcagttacaaagcatccgggacagaataaaggaaagtgaagccaagtggcat
gaagatctgaacaggtggaagagccggcggcgtagtgcaaactctgacctccacaagaag
cgtgaggagagggagcagattgaacttattaacagtgggggaggggccagtgccatcatg
actgcacagctcaccgggatgccagaggagagctccaacatgcctggacccatgagtgat
gcgggctccagtgtcagcagtactgggtggtccaccaccttgactttacccctcacgaac
gggacatctgctctgaccagaggcactgacgcagagacgactgactcagctggtgaattc
ttcacccctccatcagctgttgtctctgaacagagttcactgaccagcctggctaccatg
gatccagaaccgtacgagcagcagagtccagacttcagctgccgtgcaagcctcctggag
agcttttatgcagggagagcacgcgtatctgccactctacccagaggtttcagaaggtca
gaaggttcctcgcgcctcttcacgggcgtcaccccacgtccatttggagccaaaccctcg
aaagtgtcttcactgcccagagtatattcaatggacgactctcataaaagcctgatcagc
gggaaccgagaccattcaatcatcccctctttccttagtggtcaaggaaaggtcacagcc
tctgctgacatgggccactttcgttcaagcactcatccaatcaagaaggaagaagaagag
agaagagatggaaggttgtcagcgcctccaattaactcgtttgtcactaaagtgactatg
gccgcctccaatatacaaacatctcctcctgcggtctctgaaatcagggatattaaggtg
ggtcaaagtgaaatgcgagtctgtttgaatcagaagccaaacagtgggagagactttgga
ttcaaggctcactgggactcaactggtgcttgtgtgaaatctgttcaagcaggcagccca
gcagagttgtgtggtctgctgatgggtgatgagattgtggcacttggtggatgcagggtg
gctgaaataaattatgagcagtttaagggcagtatgaacacagcacagcaaaagggcact
ttactgatggacatccgacgacacggccagaacgactggggcagtgaccaacctttccta
ccgtacaagagccataagaccatcaatttgaccagtgccaattcaacacttatagggcgg
cccgagcagtatgtctcgattaacacaacctctcaagtagagaccatggtgaagacacaa
gtcaacggacagcctgctaatggagttctacctaaaatggtgaatggacgtatccaggac
aatccagtttctctaagaaacaaaggtggctcggaatctgccatctctgatctgcaggtt
ccctccatcagtaccacctcctctcgctggtcatgggatcatgaggaggagaggcggcgg
caggagaaatggcagatggaacaagagcgcctcctgcaggagaagtatcgacgtgatcag
gagaagttggaggaggagtggaggagagctcagcaggaggtctatggagaggagcacagt
ggtactgaggagcagaaatgcacttatgtgctgtcaaatggaaatgctacttgtattcca
tcgcccttcttcaaccaatccattgctaccacttcagtggcatccaagcagaatgcagag
aaggtggaagcaacacagaacagacagagctctgtgcaaacagcagcagcacagcagtca
ctaaaggcagaagtggagtgtgattcaaccacaaagagtcagtgctcagaggagtcctat
gggtttgccaagcttacagtttctgacaggacaaagtcaaaatctacccctgcacttcaa
ggccttcacaaacaagatgctaaagcaggaagcggtaaaaagaagggacagctgtcacag
gcagaaaaggaacgtctgcagatcctggaagagatgaggaagaagacacagctcctcact
gacaacagttggatccgtcagcgcaatgctagcatcaacaaagagcccatcactgtggga
acatcaatcaggagatatgaatctctggacaacctccactcaaccaactcctcctggtct
aggcagtcctacacttcaagtgtcgcaaacaggcaccattatgctttgggaaaccctggc
acttacaggagtggacgcagcagcctgggccctgattcagctatcttctctactggtcta
aagcagagctccaactctcccactccaccaatcacaactatgcctgagccatcggtccct
aagtcccgtccaaactctcaacaacgtggcaggctggtcagtggcaggcggatgtgctca
aggtgtgagcggcctctggggaagggagctgccatggtcatcgattccctggagctctgc
tttcacattggttgcttcaagtgtgtcagctgcaggactgaccttgggagaggggctgag
tccggagctcaggtcagagtcagacacggacagctcttctgtaacacctgctacagcaga
gtcagagtctgttcctccatctccaagtga
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integrated database retrieval system