Sinocyclocheilus anshuiensis: 107692312
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Entry
107692312 CDS
T04917
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh04010
MAPK signaling pathway
sanh04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107692312
04020 Calcium signaling pathway
107692312
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sanh04040
]
107692312
Ion channels [BR:
sanh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107692312
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
EGF_Hmr-1
Motif
Other DBs
NCBI-GeneID:
107692312
NCBI-ProteinID:
XP_016346783
LinkDB
All DBs
Position
Unknown
AA seq
1305 aa
AA seq
DB search
MDFVVVLTGILTAVGSQFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGL
LLFFAIVMFAIIGVEFYMGKFHFTCFKVDTGEKVGDYPCGTERPARVCPNGTVCKEYWTG
PNFGITNFDNILFAILTVFQCITMEGWTDVLYHANDASGNTWNWLYFIPLIIIGSFFMLN
LVLGVLSGEFAKERERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVLLAEEDQNAEE
KSPLDVLKRTKSRKGRNDLISAEEGEEHFTDISSVAPPGSPFARASLKSSKNDSSSYFRR
KEKRIRFFIRRMVKAQSFYWIVLCLVGLNTMCVAIVHYDQPEWLTKALYLAEFVFLGLFL
TEMTLKMYGLGPRNYFHSSFNCFDFGVIVGSIFEVVWAAIQPGASFGISVLRALRLLRIF
KVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNF
DSFPAAIMTVFQILTGEDWNAVMYHGIESQGGVRGGMFSSVYFIVLTLFGNYTLLNVFLA
IAVDNLANAQELTKDEEEQEEAAKKSMALQKAMEVKEVSPMSAANISIAAFVKQNRDAIS
RRSSVCSVHSPKEQQRSLQKLSIWEQRTTQLRRHNLRNSSETLYNELEPEERLRVSSALH
LRPDMKTHHDRPLVVEHRDGTGDNSRTDTDGDTPDCQLSSSNPRKHHRCRGENGDAEEGR
HHRHHSRNREHQDTLHSSNQDGGHRNHHTAGSPEEGIGLEEREHRHHHSRRSREVNGNGN
GTIGNGGRGEGGIRGHREGEGGNGERRRLRPRVKAQFTLDGEECRENGGKHRGRPTGTDS
LATSPLRSPTEEKPEDKDNLKNSTRVGPTGVNIPVTITAPPGETTVIPMNNIDGDSLLLN
EEKKDLDELNQNAPKHILPYSSMFVFGPTNPVRRLCHYVVNLRYFEMCILTVITMSSIAL
AAEDPVQANAPRNDVLKYLDYVFTGVFTFEMVIKMIDLGLLLHPGSYFRDPWNILDFIVV
TGALVAFACSSFMGSQQSVTRGTKGKDINTIKSLRVLRVLRPLKTIKRLPKLKSVFDCVV
NSLKNVLNILIVYVLFMFIFAVIAVQLFKGKFFHCTDESKALEKDCRGQFLEYGSDGGAM
TQPREWKKYDFHYDNVMWAFLTLFTVSTGEGWPTVLKHSVDATFEDQGPSPGYRMETSIF
YVVYFIVFPFFFVNIFVALIIITFQEQGDKAMSDCSLEKNERACIDFAINAKPLTRYMPQ
DKQSYQYKIWKFVVSTPFEYSILTMIAINTVVLMMKVTQLSFVDC
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atggactttgtggtggttctgacagggattttaaccgcagtgggttcccagtttgactta
aggacgttgcgggccgtcagagtgctgagacccctcaaactggtgtctggaatcccaagt
cttcaagtagtattaaagtccattatgaaggccatggttccccttcttcagattggactg
ctgctcttctttgccatagttatgtttgccatcatcggcgtcgagttctacatgggcaaa
ttccacttcacctgctttaaagtggatacaggcgaaaaagttggtgattacccatgtgga
acagaacgtcccgcaagagtgtgtcccaatggaacagtatgtaaggagtactggacagga
cccaacttcggcatcacaaatttcgataacatactctttgccatcctcacagtcttccag
tgcatcaccatggaaggatggaccgatgtactataccatgccaatgatgcctcgggaaac
acctggaactggctgtacttcatccctctcatcatcatcggctccttcttcatgcttaac
ctcgtcctgggtgtcttatcaggggagtttgccaaagaaagagagcgagtggagaagagg
caggagttcttgaagctccgcagacagcagcagattgagagagagctcaccggatacctg
gagtggatatgcaaagcagaggaggtgttgctggcagaggaagatcagaatgctgaggag
aaatcccccctggatgtcctgaaaagaacgaagagcagaaagggtagaaatgacctcatc
agtgctgaagagggagaggaacatttcacagacatctcctctgttgctccacctggatca
cctttcgcccgagctagcctgaagagcagtaagaacgatagctcttcatatttccgtcga
aaagaaaagaggatacgctttttcattcggcggatggtgaaggcacaaagtttctactgg
atcgttctgtgtttggtgggattgaacacgatgtgtgtggccattgtccattacgaccag
cctgagtggctcaccaaggccctgtacctggcagagtttgtattcctgggtctgtttctg
acagagatgactctgaagatgtatggcctggggcccagaaactactttcactcctcgttc
aactgttttgactttggggtaattgtgggaagtatatttgaggtggtgtgggcagcgatc
cagcctggtgcatcttttgggatcagtgttctgagagccctgcgcctgctccgtattttt
aaagtaaccaagtattggaactctttgcggaatcttgtggtttcactgttgaactccatg
aagtccatcattagcttgctcttcctcctcttcctcttcatcgtagtgtttgccctgcta
ggcatgcaactcttcgggggccagtttaattttgaagatgaaactcccactacaaacttt
gacagcttccctgcagccataatgacagtcttccagattttgacaggagaggactggaat
gcagtgatgtatcatgggatagagtcccagggtggcgtccggggtggaatgttctcttca
gtctacttcattgttcttacactgtttggaaactacacacttctcaatgtattcttggcc
atcgctgtggataaccttgccaatgcacaggagctgacaaaggatgaagaggaacaagag
gaggcagcgaagaagagcatggctcttcagaaggccatggaggtgaaggaggtcagccca
atgtctgctgccaacatctcaatagcagcttttgtaaagcaaaatcgagatgcaatctct
cgcaggtcttcagtctgcagcgttcactcacctaaagagcagcagaggtcactgcagaag
ttgtccatatgggagcagcgcaccacccagctgcgtagacacaacctgcgcaacagcagc
gagaccctttacaatgaactagagcctgaagagcgtctacgtgtgtcttcagcgctccat
ctgcggcccgacatgaagacccaccatgatcgtccacttgtagtggagcacagagatggc
acaggggacaattccaggactgacaccgatggagacactccagactgtcagctgtcctct
agcaacccaaggaagcaccatcgatgtcgaggagagaacggagatgctgaagaggggagg
caccatagacaccacagccgaaacagagagcatcaggacaccctgcacagcagcaatcag
gatggaggacacaggaaccaccacacggctggttctcctgaggagggcatagggttggag
gagagagaacacagacaccaccattctcgccgatccagggaggtcaacgggaatggcaac
ggcacgattggtaatggaggcagaggcgagggtgggatacgaggtcacagagagggcgaa
ggagggaatggagaaaggaggagactccggccacgtgttaaagcccagttcacactggat
ggagaagaatgcagggagaacggtggaaaacacaggggcagaccaacaggaacagacagc
ctagccaccagccctctccggtctcctactgaagagaagccagaagacaaagataattta
aaaaacagcaccagagtgggcccaaccggagtcaacattcctgtcaccataactgcccca
ccaggagagactacagtcattcccatgaacaacattgatggtgacagtctactgctgaat
gaggaaaagaaggatcttgatgagctaaatcagaatgcgcccaaacacattctgccatac
agctccatgtttgtgtttggtccaactaacccagtgagacggctgtgtcattatgtggtg
aacctacggtactttgagatgtgtatcctcacagtcatcaccatgagcagcatcgccctc
gctgctgaagaccctgtgcaggccaatgccccgcgtaatgatgtgctgaaatacctagat
tacgtcttcactggtgtgttcacatttgagatggttataaagatgatcgatcttgggctg
ctgttgcatcctgggtcttacttcagggatccgtggaacatactggacttcattgtagtc
accggtgctctggtggccttcgcctgctcgagcttcatgggatcgcagcaaagcgtgacc
agaggaactaaaggcaaggacatcaacactatcaagtccctaagggtccttcgagtcctg
aggcctttgaagaccattaaacgtttgcctaaactcaagtccgtgtttgattgcgtggtg
aactctctgaagaatgtgctcaacatcctcatcgtttacgtcctcttcatgttcatcttt
gcggttattgctgtgcagcttttcaaggggaagttttttcactgcaccgatgagtccaaa
gccctggagaaggactgcaggggtcagttcctggagtatggcagtgatggaggggccatg
acacagccacgcgagtggaaaaagtatgatttccattatgacaacgtcatgtgggccttt
ctgaccctgttcactgtctctacaggagagggctggccaacagtgctgaaacactctgtt
gatgccacatttgaagaccagggtcccagtccgggttaccgcatggaaacctccatcttc
tacgtggtctacttcatcgtcttccccttcttctttgtcaacatctttgtggctttgatc
atcatcacattccaggagcagggagataaagccatgtcagattgcagcttggaaaagaac
gagcgagcttgtatcgactttgccatcaacgccaaacctctgactcgctacatgccgcaa
gacaagcagtcttaccagtacaagatatggaagtttgtggtgtccactccatttgagtac
tccatcctgaccatgatcgccatcaacacagtggttctcatgatgaaggtaacacagctg
tcatttgtagactgttga
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