Sinocyclocheilus anshuiensis: 107692590
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Entry
107692590 CDS
T04917
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107692590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanh03019
]
107692590
Messenger RNA biogenesis [BR:
sanh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
107692590
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
107692590
NCBI-ProteinID:
XP_016347182
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MSSSLQEHPTETEGSVDCSVNIIQYVCFLYSYSPEEKMSAEEADKTTTTDASAGDEEEEW
LYGDEGESKETEEEEAKLTAAISVTSAPPVTEEVTATTNNTTTTITTTTGNGVASQEEAP
GEDEDSESDSDDDDDDVRVTIGDIKTGAPQYAAYGGTPVNLNIKSAGSRAYGAGTKVKGI
DLEAPGSINGVPVLEVDMESFEEKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRLRMGL
DILNIGSTTSKISVSXXXXXNSEKEITVAAHAAKADFSSPSNLYKAGLNPARISPPHWAG
PASQEMSYYTKIPGTIDVIGGQTASISRVEGRRRHNLEGNNIQVISEHPSSEAEPAKMPP
PFFPPGPLPPNIPPPPFLPPPVSQAPPLIPPPRMPITIPPPNFPPPTGGPPPSLIPTMDN
SGHPGGYDGRPVAPYPFPTGGFPPPMQGAVNPWPGLMDNPKQWDYYPRRDKEREKERERD
RPRERGHERDHSPSAVVYNSDEERYRSYRDYGDRGYERHRERSSREKEERHRERRHREKE
EGRHKSSRSSSRRRHDSEEGDSHRRHKHKKSKRSKEGKDPSEERSADQENQEAME
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcaagtctgcaagaacatcctacagagacagaaggaagtgtggattgctccgta
aacatcattcaatacgtttgttttctatattcgtatagcccagaggagaagatgtctgca
gaggaggcggataaaaccaccaccactgatgcgagtgcaggagacgaggaggaggaatgg
ttgtacggggatgaaggtgaaagtaaagaaactgaagaagaggaggccaaactgacagca
gccatcagtgtgacttctgctcctcctgttaccgaggaggtcaccgcaaccacaaacaac
accactaccaccatcaccaccactactggaaatggtgtggccagtcaggaggaagcacct
ggagaagatgaagacagtgagagcgatagtgatgatgacgatgatgatgtccgcgtcacc
attggcgatataaaaacaggagcgccacagtacgcggcatatgggggaactccagtgaat
ctaaacataaagtcagctggcagcagagcatatggagcaggtactaaagtgaagggcata
gacctcgaagctccaggcagcatcaatggagttccagtcctggaagtggacatggagtcc
tttgaggagaaaccatggaggaagccaggtgcggacttgtctgactattttaactatggg
tttaacgaggacacgtggaaagcatattgtgaaaagcagaagaggttacgcatgggcctt
gacattctcaacattgggtccaccaccagcaagatatcagtaagcnnnnnnnnnnnnngt
aacagtgagaaggagatcacagttgcagctcatgcagctaaagcagacttttcctctcca
tctaacctgtataaagcaggtctcaacccagcgaggatatcccctccacattgggcaggg
cctgcctctcaagaaatgtcctattatacgaagattcccgggaccatagatgtgattggc
ggacagactgcctccattagcagggtggaaggacgacgtcgccacaatctggaggggaat
aacatccaggtgatctcggaacatcccagctctgaggctgaacccgccaagatgcctcct
cctttctttcccccgggaccgctgcctccaaacatcccacctcctccattcctccctcct
cctgtcagtcaggctccacctctgatcccacctccacggatgcccatcaccattcctcca
cccaattttccccctcctactggaggaccccctccttcacttatccctactatggacaac
agtgggcacccaggaggatatgacggacgtcctgttgctccatacccttttcctacaggt
gggtttcctccacccatgcaaggagctgttaacccctggcctggtttgatggacaaccca
aagcagtgggactactaccctcggcgagacaaagagagggaaaaagagcgagagagagac
aggccgagggaaaggggtcatgagagagaccatagtccctctgctgtggtttataacagt
gatgaagaacggtatcgttcttaccgtgattacggagacagagggtatgagaggcatcgg
gagcgatcgagccgagagaaggaggagcgtcacagggagaggagacacagagagaaagag
gaagggaggcacaagtcatcacggagcagtagcagacggagacatgacagcgaggagggt
gacagtcaccggcgccacaagcacaagaagtccaaaaggagcaaagagggcaaggatccc
agtgaggagcgttctgctgaccaggagaaccaggaggccatggagtaa
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