Sinocyclocheilus anshuiensis: 107692659
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Entry
107692659 CDS
T04917
Symbol
palb2
Name
(RefSeq) partner and localizer of BRCA2
KO
K10897
partner and localizer of BRCA2
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03440
Homologous recombination
sanh03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107692659 (palb2)
03460 Fanconi anemia pathway
107692659 (palb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sanh03400
]
107692659 (palb2)
DNA repair and recombination proteins [BR:
sanh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
107692659 (palb2)
FA (Fanconi anemia) pathway
Downstream FA components
107692659 (palb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
107692659
NCBI-ProteinID:
XP_016347309
UniProt:
A0A671LKW8
LinkDB
All DBs
Position
Unknown
AA seq
1343 aa
AA seq
DB search
MSEEILPNEDKETLRRRLEQLKQEYEKTAQRLQRAERHDAIRRLTQNNSPHTSEPSSVTS
SMPTSEYSENHENMQLQTSLVAERNSSGFSAVPKVPAIQLDFVEIMSTPPLYSPVCKRSP
AHRLRSKRSRLRLRNKERESDTDISQERDGSGDGICEKVDTEIKEGSECTDNKNSLKGVR
KYGKMEDKDCEKKKERKIEKMSAEREKNQDRPIGIRKVGKIAKPSQELENDGKRVGHCVL
NCSMIQSDNKLPLVSSEKKKNVHCSQKKVNVEQKSHSGSAVSIQTSSFPQSSEGVQITDK
SQEMLEQTNQLLKDSNKGYDDRIDIKQSGVLDSCTLVEGLPFPVEYYIRTTRRMAASHSS
VDLDAVIYSQLTGGRGRRRLSQSQTSGRGRMTPEHSVCRSTDQTRRGGKGQRGRRGRPRS
TASRAKADPDCTISHPPSDSQADSESPTEEKSTSHTESPSQSVLVLERLEAESQEVHSPG
PTVSLRPSPEQGHFEQGVTQDFKHLPDSQLCFDSQLLPDSNLYPIFRRKHGQTGKASQTD
QSPLLPSLASLIQALQEKDKKTGLLAALDFQDFHLPDEDFGQLKLERLRWSTSVVEPFVQ
RPLVYNTRQSSRRQRMSGRKSNCEARYSVGELFTPEPLTTSSLENSLPLCQSDPADQSQT
EIEKDLKAVNEIKTFSSDVMDSRQIIKPEPDGSLYNERKVEAPLKSSETENINEIQSQTK
MQKQSHMLPENNSPCLVTLSLSPSLTSHTQKGQDTVLPSLGMSPHFLTPGSPLDLRSPLF
PPSGILRSPSSFTLMGFVSPDIKNRISVKSGDQGGSETQNQTQISQETMTEVQNTVKPRM
PSQNNTPPGYENLNGPETKSSCISVNEQKRECSLDTESNLECGNKINCTPENEVQLLNVP
EPVIFKTLFESEIQTKNSSEMDIETFKGSELGSETQSMGLNPNLKLFHCGNKSGAVGQTP
LDTSTYQRTERRTGFDNNSTQLEERNTVPSNNRTLVHEESLTGTSFTDEVHCSAVLQEMH
TFKALEGGCVLDLCLVRWPSEDWSICVAGEWSVCLWAQMKGVQSWRLLHTWTFAQSVMSL
QGIPDSSGLLCVSLGHLEIREARMLCCPSMDGPFSQNTVCKDTLQAVLSVSNCRLVCCST
PGDQQRVRVLTVTQDGRVKNTLPLASAKQNIWTLAAVEGEKDALIGWTECKTLLIWNMKT
GQLLQTIYLEKTLTMTNCMKGYCYRGVLCVLLQNAGNVCDDESNTSLFTLIATNPLTGKH
ITLTSINCPDQHKQQLIDGDVLGSGLVGVFQSGHLAVWDLRGSVAKVVGVLDELCRLARW
AGPDMLLTGYLNGDVSVFHYKST
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaggagattctccctaacgaagataaagagaccctgagaagacgattggagcag
ctgaagcaagagtatgagaagaccgcacagagactgcagagagcagagcgccatgatgcc
attcgcagacttacacagaataactctccacacacatctgagccatcttctgtgacttca
tccatgccaacatcagaatattcagaaaaccatgagaatatgcaattacaaaccagccta
gttgcagaaagaaacagctctggtttttccgctgtaccaaaagtccctgccatccaattg
gattttgtcgagattatgtccacaccgcctttgtactccccagtatgcaaacgaagcccc
gcccaccgcctgcgttctaagcgtagtcgactgcgtctacggaacaaagagcgagaatca
gacactgacatcagccaagaaagagatggaagtggagacggtatttgtgaaaaggtggac
actgaaataaaggagggtagtgaatgtactgataacaagaacagtctaaaaggagtgaga
aaatatggtaagatggaagacaaggactgtgaaaagaaaaaggaaagaaaaattgagaag
atgtcagctgagagggagaagaaccaggacaggccaataggcataagaaaagttggtaaa
attgctaagccatcacaagaactggagaatgatgggaaaagagtgggacattgtgtatta
aactgctctatgatccagtcagataacaaactgccattggtttcaagtgaaaaaaaaaag
aacgttcactgtagccagaaaaaggttaacgttgagcaaaaatcacactcaggttcagct
gtgtctatccaaacctcatctttccctcagtcatctgagggagtacagattactgacaaa
tcacaagagatgcttgaacaaactaaccagttgctcaaagactcaaataaaggttatgat
gacaggatagacattaaacaatctggtgttctggactcttgcacgctggttgagggttta
ccgtttcctgtggagtattatattcggacgacaaggcgcatggctgcatctcacagctct
gtcgatctagatgctgtcatttacagccagctcactggggggcggggcagacggaggctc
agccaatcgcaaacgagtggtagaggtcgcatgaccccagagcattcagtctgcaggtcc
actgaccagaccagacgcggaggaaaaggtcagagagggagaagaggccgtccaagaagc
actgcttcacgtgccaaagctgatcctgattgtacaatatcacatcccccaagtgattct
caagcagattcagaatctcctacagaagaaaaatccacgtctcacactgaatcacccagc
caatcagtactggtccttgaaaggctagaggcagagtctcaggaagtccattctcctggg
cccacagtgagcttaaggccaagtccagagcaaggacatttcgagcaaggagttactcaa
gattttaagcatcttccagattctcagctttgctttgattcccaactcctcccggattca
aatttgtaccctattttcagaagaaaacatggccaaactggaaaagcatctcagacagat
cagtcacctcttctgccatcattagcttcactcattcaggctcttcaagaaaaggataag
aaaactggactgttggcggctcttgatttccaggatttccacctgcctgatgaggatttt
ggacaactaaagttagaaagattgcgctggtccacttcagtcgtagagcccttcgtacag
cgtcccctcgtgtacaatacacggcagagcagcaggcgccagagaatgagcgggagaaag
agtaattgtgaagcgcgttactcagtgggtgaactatttactccagaacccctaactacc
tcttctcttgagaatagtttacctctttgtcagtcagaccctgctgatcagtcacagaca
gagatagaaaaggacctcaaagctgtaaatgaaataaagaccttctcctcagatgtgatg
gacagtagacagattatcaaacctgaaccagacggaagcttatataatgagagaaaagtt
gaggccccacttaaatcctcagaaactgaaaacattaacgagattcagtcgcaaacaaag
atgcaaaaacaatctcacatgctcccagagaacaactcgccttgccttgtgacactaagt
ttgagcccatctctgacttcacacacacagaaaggtcaagatactgtcctaccatctttg
ggaatgtcccctcactttttgactccaggttcaccattagacctccggtcacctctgttt
cctccctctggtatccttaggtctccctcttcatttacacttatgggatttgtgtctcca
gacatcaaaaatcgtatctctgtaaaaagtggagatcagggaggttctgaaacacaaaat
caaactcaaattagtcaagaaacaatgacagaagttcaaaatactgtgaaaccacgtatg
ccatcccaaaacaacactccaccgggatatgaaaacttaaatggcccagaaactaaatcc
tcatgcatctcagtaaatgaacagaaacgtgaatgcagtcttgatacggaaagcaatctt
gaatgtggaaataagatcaattgcacgccagaaaatgaagttcaactcctcaatgttcct
gaaccagtgatttttaaaactctctttgagtctgaaatccaaaccaagaacagttctgaa
atggacattgaaacctttaaaggctctgagctcgggtctgaaacccaaagtatggggtta
aacccaaatttgaaactgtttcattgtggtaataaatctggagctgttggtcaaactcct
ttggacacttccacctatcagagaacagaaagaaggactggttttgataataacagtact
cagttagaggagcgtaacactgttccatccaacaaccggacattagtgcatgaggaatct
ctaactggcacttcattcactgatgaagttcattgttctgcagtcctgcaggagatgcac
acttttaaggcgctggagggtggatgtgtgttggatttgtgtttggtgcgatggccatcg
gaggactggagcatatgtgtggcaggagaatggagcgtttgcctttgggctcagatgaag
ggagttcagtcgtggaggcttttacacacctggacatttgcacagtccgtcatgtctttg
caagggataccagactcttcgggactgctttgtgtcagtctgggtcacttggaaatcaga
gaggcaaggatgctttgctgtccaagtatggatgggccgttctctcagaacacagtgtgc
aaggacacgttacaagcagtgttgagtgtgtctaattgtcggcttgtgtgttgctccacc
cctggagatcaacaaagagtccgtgtgttaacagtgactcaagatggaagggtaaagaac
actcttcccctggcctctgctaagcagaacatttggacccttgcagctgtcgagggtgaa
aaagatgctctgattggttggacagaatgtaaaactctccttatatggaacatgaaaaca
ggccagctgctgcagactatatacctggaaaagactttaaccatgacaaactgcatgaag
ggatattgttacagaggtgtgctgtgtgtgttgcttcagaatgcaggaaatgtgtgtgat
gatgagagtaacacatctctttttacgctgattgccacaaatcctctcactggcaaacat
atcacactgacctctatcaactgtcctgatcaacacaaacagcagttaatagatggtgat
gtcttgggctctgggcttgttggtgtttttcagtctggtcatcttgctgtttgggatctc
agaggaagcgtggctaaagttgttggtgtgctggatgagttgtgtcgactagcccgctgg
gcagggccagatatgctgctgactggatatctgaatggagatgttagtgtgtttcattat
aaatctacataa
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