Sinocyclocheilus anshuiensis: 107693596
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Entry
107693596 CDS
T04917
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh02010
ABC transporters
sanh04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107693596
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107693596
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sanh02000
]
107693596
Transporters [BR:
sanh02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
107693596
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
AAA_23
R1_ABCA1
AAA_15
Motif
Other DBs
NCBI-GeneID:
107693596
NCBI-ProteinID:
XP_016348530
LinkDB
All DBs
Position
Unknown
AA seq
1477 aa
AA seq
DB search
MSLLTQLRLLLWKNFTLRRRQKVRLLVELVWPLFLFIILVSVRSTNLPVYKSQCHYPNKP
LPSAGVLPWLQGMLCNIQNPCVSSPTPGEAPGQVNNFDNSTVTKVLVEVQSLLADPALFS
SVKLISEDIGRWMSVLENANPAAGQSIPLRSLLRTNETFSEYLTNSLSVPNTAAASLMRA
RVRLGQLPALSADGDLHSVLCGPSADRILDFNSANQKEEFQNITCSLTANQLLQARRVFM
QNLDNIKLLNALPSALGLNRLEVTALMGQTSAHIAPLMTGMSNFRSSVLLSAVETLDFRS
DPFGSLTQLMCGTDFNSTSRATVRRASTESDQQNTRNATADNTNTTSNNTSEFCKNLTDT
LESTSSLRLLWRTFRPFLLGKILYAPDTNVTRSIVTEVHVQTQTQRDANAVHLNKKSTDS
QCANRTFDALAKVGELAEAWLENEDVLWDFFNNSTQINTLRALLKNPVFAAILDEQLEDS
GLSSALISGFLFNGPESERPAGMPAFDWRNVFNATSSAVQQITQILACFDLDKFEGVSTE
AVLVEQSLKLLNQDRFWAGLVFTDLDPASWSPLARDNPFNDLHYVRGGFVYLQDMVDRGI
ITVQTGVSQSLGIYAQQMPYPCYVDDAFVSSIGTILPMFLVLAFIYTACQTIKGLVLEKE
LRLKEVLRVVGVRNSSMWFCWFIDNMVLLTIPCALISVMVKYGKVLRYSDPSVIFVFLLV
FCVATVMQCFFISVFFSRANLAAACGGLIYFLLYLPHVLCYTWRDVMGFGAKIATSLLSC
VAFGYGCENLSRYEEQGIGIQWSNIRVSPQENDRYSFIVSIFMMLFDAFIYWVLTWYIEN
VYPGQYGIPKPWYFPFTSSYWCGTPVGSDAQPDLLQELENQSGYLEKPPPGMKPGVCIRN
LVKVYKTGNKLAVDGLSLDFYQDHITSFLGHNGAGKTTTMSILTGLFAPTSGTAYVNGYD
IRSDMDTIRTHLGMCPQHNVLFNDLTVEEHIYFYARLKGRSSKEVQKEIDQMIRDVGLPH
KRKDLVKNLSGGMQRKLSVAIAFVGGSNVVILDEPTAGVDPYARRGIWELLLKYKTGRTI
ILSTHHMDEADILGDRIAIISHGRVCCCGSSLFLKKTYGRGYYLTIARANQERVMAQRAP
AIKECDKFSVDEGICSDSISSLDPPDVADLSRLVRRHVPEAEFLEVVGQELVYVLPYTGA
TNGSFASLFKELDLEKSALGITSYGISDTSLEEIFLKVAEDTGVDVESHDKKENLKQKRR
SSSRISGIQTISSALEGKDANAVKNGALKHAKVRFTSRVEDTQRPMCANGKGSYVIMAWS
LIKQQFLALFIKRFHHARRSRRGIIAQIMNARQLNSLKCICIDLELQPWMYGAPQNTFYS
FDDPAVDQVERVTNALLSSPGFGTRCMRTNPIPKLPCNPVGGNIWFTPAVDPSITEIFEK
GNWSMENPSPDCQCSTPQRSFMLPDCPLGAGGLPPPQ
NT seq
4431 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcctgacacaactcagattgttactgtggaagaactttactctacggaggaga
cagaaggtgcgtttgctggtggagttggtttggcctctgttcctgttcatcattctcgtg
tcggtcagatccaccaatcttccggtttataaaagccagtgccactaccccaataagccc
ctcccatcggcaggtgtgttgccatggctacagggcatgctgtgtaacatacagaacccg
tgtgtgagttcccccacacctggcgaagcacctggacaggtgaacaacttcgacaactcc
acagtcacaaaggttttggttgaagtgcagtcgctcctggcggatcccgctctcttcagc
agcgtcaaactgatctctgaggatatcggccgatggatgtctgtcctggagaatgcaaac
ccagccgcaggtcagtcgattccgcttcgcagtttgctgagaaccaacgagacgttttct
gaatatctgacgaacagcctttcggtgccaaacacagccgccgcgagcctgatgagggcc
agagtccggctcggtcagctgcctgcgctgtcggctgatggagatctgcactcggtgctc
tgcggcccgtcggccgatcgcatcctggactttaattcagccaatcagaaagaggagttt
cagaacatcacatgctccctgacagccaatcagcttcttcaggccagacgagtcttcatg
cagaatctggacaacatcaaactcctgaacgcacttccatcagcgctgggtctgaaccgg
ctggaggtgaccgctctgatgggccaaaccagtgctcacatcgctccgctcatgaccggg
atgtctaactttaggtcttcagtgctgctgagtgcagtagaaacgttggatttcaggtcg
gatccgttcgggagcctcactcagctgatgtgtggaacagactttaactcgacgagcaga
gctactgtgagaagagcgtcgacagaatcagaccaacaaaacacacgcaacgcaacagcc
gacaacaccaacacaaccagcaacaacaccagtgagttctgtaaaaacctgacggacacg
ctggagagcacttccagcctgcgtctgctctggaggaccttccggccgttcctgctggga
aagatcctctacgctcctgacactaatgttacacgcagcatcgtcacagaggtacacgtg
caaacacagacacagagggacgctaatgcagtgcatctgaataagaagagcacagactct
caatgcgccaaccgcacatttgacgcgctggctaaagtgggcgaactggcagaggcctgg
ctggagaatgaagatgtgctctgggatttcttcaacaatagcacacagatcaacacactg
agggctcttctgaagaaccctgtgtttgcagccattctggacgagcagctggaggactcc
ggtctgtcctcagcactcatcagcggcttcctgtttaacggccctgagtcggagcgtccg
gcggggatgccagccttcgactggcgtaacgtcttcaacgccaccagtagtgcagtgcag
cagataactcagatcctcgcgtgttttgatctggataagtttgaaggcgtcagcactgag
gctgtgctggttgagcagtctttgaagctcctgaatcaggaccgcttctgggccggtctg
gtcttcacagatctggaccctgcgtcctggtccccgttggcccgtgataacccgtttaat
gacctgcactacgtgagaggaggcttcgtgtacctgcaggacatggtggatcgaggaatc
attacagtgcagacgggagtcagtcagtcgctcggcatctacgcacagcagatgccgtac
ccgtgttacgtggacgacgccttcgtttcgtccattggcaccatactgcccatgttcctg
gtgctggcgttcatctacacggcctgccagaccatcaaaggcctggttctggagaaggag
ctccgtctgaaggaggttctgcgggttgtcggggttcgaaactcttccatgtggttctgc
tggtttatagataacatggttctgctgaccattccctgtgctttgatctcggtcatggtg
aagtatggaaaggttctgcgatacagcgacccgtctgtgatctttgtcttcctcctggtc
ttctgcgtggccactgtcatgcagtgctttttcatcagtgtgtttttctctcgggcgaat
ctggcagccgcctgtggtggcctcatctacttcctgctctacctgcctcatgtgctttgc
tacacctggagggacgtcatgggcttcggcgccaagatcgccacgagcctgctgtcgtgt
gtggcattcggatacggctgtgagaatctatcccgttatgaagagcagggcatcggcatt
cagtggagcaacatccgggtcagtccgcaggagaacgaccgctactccttcatcgtctcc
atcttcatgatgctgttcgacgcgttcatttactgggttctcacctggtacatcgagaat
gtctatccgggtcagtatggcatcccgaagccgtggtattttcccttcacgtcctcgtac
tggtgtgggactccagtgggatctgatgcccaacccgacctgcttcaagagctggagaat
cagagcggttacctggaaaagcctccgcctggaatgaagcctggagtttgtatcagaaac
ctggtgaaggtctataagacaggaaataaactggccgtggacggactcagtctggacttc
tatcaggatcacatcacctcgtttttaggacacaacggagccggaaaaaccaccaccatg
tcgatactgacgggtcttttcgctcccacctcgggtacggcttacgttaacggctacgac
atccgcagcgacatggacaccatcaggactcacctgggaatgtgtccacaacacaacgtc
ctcttcaacgacctgacagtggaagagcacatttatttctacgctcgtctgaagggtcgg
agctctaaagaggtgcagaaggagattgatcagatgattcgagacgtgggtttgcctcac
aaacgcaaagacctcgtcaagaacctctcaggtgggatgcagaggaagctgtcggtcgcc
atcgcgttcgtgggaggatccaatgttgtgattctggacgagccgacagcgggagtcgat
ccgtatgcgcgcagaggcatctgggagctgctgctcaaatacaaaacaggtcgtaccatc
atcctgtcgacgcatcacatggatgaagcggatattctgggcgatcgtatcgccatcatc
tcgcacggccgcgtctgctgctgcggctcctcgctcttcctcaagaagacgtacggtaga
ggctattacctgacgatcgcgcgggccaatcaggagcgagtcatggcacaacgagcccca
gcgattaaagagtgtgataaattcagcgtggatgaaggaatctgcagtgacagcatcagc
agtctggatccgccagacgtggcggatctgagtcgactggtgcggcggcacgtgccggag
gccgagtttctggaggtcgtaggtcaagagctggtgtacgtgctgccgtatacaggcgcc
acaaacggcagctttgcgtccctctttaaagagctggatctggagaagagcgctctgggc
atcaccagctacgggatatcagacactagtctggaggagatttttctgaaggtggctgaa
gacacgggtgttgacgtggagtcccatgataagaaagaaaatcttaaacaaaagcgcaga
agcagctcaaggatatcaggaatacagactatcagctcagcactggaaggcaaagatgca
aacgctgtgaaaaatggtgcgctcaaacatgcaaaggttagattcactagtcgcgtggag
gacacccagcggcccatgtgtgcgaatggcaaagggtcgtacgtcatcatggcttggtca
ctgatcaaacagcagtttttagctctttttatcaaacgtttccaccatgcccgcagaagc
cggaggggaatcatcgctcagattatgaatgccagacagttaaactcccttaaatgcata
tgtattgatctggagcttcagccctggatgtatggagctccacagaataccttctatagt
tttgatgatcctgctgtagatcaggtggagagagtgacgaatgctctgctcagttcacca
ggatttgggacgcgctgcatgagaaccaaccccatacctaaattaccgtgtaacccggtg
ggaggcaatatttggttcactccggcagtggatccatccatcactgagatctttgagaag
gggaactggagcatggagaacccatcgccagactgccagtgcagcacaccgcagcgcagc
ttcatgctcccagactgcccgctcggagccggcggtttaccgccaccgcag
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