Sinocyclocheilus anshuiensis: 107694937
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Entry
107694937 CDS
T04917
Symbol
edc4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107694937 (edc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanh03019
]
107694937 (edc4)
Messenger RNA biogenesis [BR:
sanh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107694937 (edc4)
mRNA degradation factors
5'-3' decay
Decapping complex
107694937 (edc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_HPS5
Beta-prop_EML_2
Beta-prop_EDC4L
Beta-prop_TEP1_2nd
WD40_Prp19
Pdc1_Ge1
Uteroglobin
Motif
Other DBs
NCBI-GeneID:
107694937
NCBI-ProteinID:
XP_016350144
UniProt:
A0A671M672
LinkDB
All DBs
Position
Unknown
AA seq
1391 aa
AA seq
DB search
MASGSNMDIEGATQHLRDILKLDRPGNSAEPSLVESQRKPSFNGELNGILGADLIGAGGL
ATMLEPTAHNLDKLNGQDTQTICLSGDDGSTCVPIRANNVEIVSSRDSSIDSKARGSNKV
KIQPVAKYDWEHKYYYGNLIAVSNSYLAYAIRGANNHSMIRVLRLGSTERSLLKGFTGAV
TDLAFAHLDSTLLGCVDEAGNMFIWQLTSHSSKIHDEVIVHIRRPEDTPLNSNRRLIWCP
FIPEDNDENPEDACQTLALLHEDRAEVWDLDILRSNNSSWPVDATELKEGFITIRGHTAR
ISEGALSPDGTVLATASHDGFVKFWQIYIEGQDQPRCLHEWQPHNGRPLSCLLFCDNHKK
QDPEVPFWRFLITGADQNQELKMWCTVSWTCLQTIRFSPDPFNSSVLPSLKASLDLSAEF
LILSDVQRKVLYVMELLQDQEKGCASFTAVSEFLLTHPVLSFGVQDVARARLRHTEVLPP
DEESESMTTEGNQGPSESKSGIQIKLYCVHTKSLQDVQIWFQPNQGASSSLFMPQSGSQD
GFGFSDPLADLNVEAMSSDKESGDSGSQNDLSKILALPTPADFMSPAPSALPKLMTPDAF
MTPSASMPASPGSSASSLTIVTAMSSSDSGARGGDDLTQSPKMSVECGNSSLTLNASAGS
PRSNSILISGLGENIQVSPPNPPLSLDLQAIDPMVVPQASPTRARSPDVISSASTAMSLD
IPEIASETLQRGLPGAAADSGPVLHSDSMASAASVLHLLSPRARSSAEHSLLLLELGAAS
VDGEQRLNNTPSLLETALSQENAVAAGGSCSDSSVNHTWPAAPDITRETRNSLRDNGLGD
CSREEIKDRYISSPYHRRTYHLTQNDSQDASAEQSDHDDEVASLASSSGNCGPHSSHRLP
VKDWKTSPCSSPKLKRKSKKDEVESSQSRQIENQMSTEVQDELLQMLRSQQREIAELRQN
QLDILQRVTSHMDAVQSSIMAHIEHAMLAQQEQEQRRMERILAEGQSRNQQFQDQLVQQL
VQTLNNSLCNRLDKVLREEMKKTVPQAISKSLDPVTGQMSSTIAAKLTAVEGTLKENVTK
VVKSKNTTDAIGRAAAEAMQGPIQAAYKETFQSIVLPVFERGCQSMFQQINDSFKQGTNE
YIQQLETHIKNRKQRDQDARDPVIGQLQQMIDTLQNSQDQLATTVTASVCSDVQHQLHMI
VGNLQDSILMQVQRIVKGEVSLAMKEQQAAVTSSIMQAMRSAAGTPVPSAHLDYQAQQAS
ILQLLQQGQLNEAFQQALSAADLNLVLYVCETIDSQQVFGQQPCPLHQAVLLSLIQQLST
NLSTRTELKISYLEDAVMNLDHGDPVTRDHMSAVLSQVRQKLLHFLQQDAHSPLCKRARR
LMMMLQGLVNH
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atggcttctggttccaacatggacatagagggcgcgacccagcaccttcgggacatctta
aaactggatcgtcccggtaattcggccgagccttctttggtagagagccagagaaaacca
tctttcaatggagagttgaatggcattcttggagcggatcttattggagcaggaggactt
gcgacaatgttggagccaactgctcacaacttagacaaacttaatggacaggacacacag
actatctgcctttcaggagacgatggatccacctgtgtccccatcagagcaaacaatgtt
gaaattgtgtccagtcgtgactctagtattgacagtaaggctcgtggcagcaacaaggtt
aaaattcagccagtggccaaatatgactgggagcacaagtactactatggcaatttaata
gccgtgtccaactcatacttggcttatgccatcagaggcgcaaacaatcattctatgatc
cgagtgctgcggttgggatcaaccgagcgttcgctgctgaagggcttcaccggtgcagtc
acagaccttgctttcgcccacttggactccaccctgttgggctgcgtggatgaggctgga
aacatgttcatttggcagctcactagccacagcagcaaaatacacgatgaagtgatcgtt
cacatccgaaggcctgaggacaccccactaaattccaaccgcagactcatctggtgtccc
ttcatcccggaggacaatgatgagaacccagaggatgcgtgtcagacactggcactcctt
catgaagaccgagctgaggtttgggaccttgacatcctccgatccaataacagctcatgg
cctgtggacgccacagaactgaaagagggcttcatcaccattagaggacacacagcacgc
attagtgagggagctctgtcccctgatggcacggtcttggccacagccagtcatgatgga
tttgtaaagttttggcaaatctacattgaaggacaggaccaacccagatgcctgcatgaa
tggcagccacataatggacggcctctttcctgcctgctcttttgtgacaaccacaagaag
caagacccagaagttcctttctggcgcttcctgatcactggagctgatcagaaccaggaa
cttaagatgtggtgcacagtgtcatggacgtgcttacaaactatcagattttcccctgat
ccattcaacagcagtgtactacccagcttgaaggccagtttggacctgtctgcagaattt
ctcattctcagtgatgttcagaggaaggtgttgtatgtcatggagctgttacaggatcag
gaaaaaggctgtgccagcttcactgcagtttcagagtttctgcttacacaccctgtgctc
agcttcggcgtacaggatgtcgcccgcgccagactgcgccacacagaagtccttccccct
gatgaggaaagtgaaagcatgacgacagaaggaaaccagggaccctcggagtccaaatca
ggaatccagattaaactctactgcgtgcatacaaaatcactacaggatgtgcagatctgg
ttccagcccaatcagggggcctcttcctccctcttcatgccacagtctggatcacaggat
ggctttgggttttctgacccactggctgatctgaatgtggaggcaatgagctctgataaa
gagtctggtgatagtggatcacagaatgacctgagtaagattctggctcttccaactcca
gctgacttcatgagtccagccccatcagccttgcccaaactcatgaccccagatgccttc
atgacgcccagcgcctccatgcccgcttctcctggcagcagtgccagcagcctgaccata
gtcacggccatgagcagctcagatagcggtgcaagaggtggagatgatcttacccagagc
cctaaaatgtctgtcgaatgtggcaacagcagcttgactctgaatgccagcgcaggcagt
ccaagatccaactctatcctcatctcaggccttggggaaaatatccaggtttcccctcca
aaccctcccctctccctggatctccaggccatagaccccatggttgtcccccaggcctct
ccgaccagagctcgctctccagatgtcatctcctctgcttctacggcaatgtccctggac
atccccgagatcgcctcagagaccctgcagagggggctgcccggtgctgctgctgactca
ggccctgtcctgcattctgacagcatggcatcagccgcatcagtcctccacctgttgtct
ccaagagcccggagcagtgctgagcacagtttgctgcttctggaattgggtgcagcatct
gtggatggagaacagagactcaataacacaccctccctgctggagacggctctgtcgcag
gagaacgcagtagcagctggaggatcctgttcggacagcagcgtgaaccacacctggccc
gcagcacctgatatcacacgagaaactcgcaacagcctgagagacaatggtttgggagac
tgctctagggaggaaataaaggacagatacatttcttctccataccacaggcgcacatat
cacctgactcagaacgacagtcaagatgcaagtgcagagcagagtgatcatgatgatgag
gttgccagtctggcctcctcctcgggaaattgtggccctcactcctctcacagacttcct
gtgaaagactggaaaacatctccctgcagctcgcctaagctcaagaggaagagcaagaag
gatgaagtagagtcctcacagtctagacagattgagaaccagatgagcacagaggtgcag
gatgagctcctacagatgttacggagccagcaaagggagatcgctgagctgagacagaac
cagctggacattctgcagagagtcaccagccacatggatgctgtgcagagctccatcatg
gctcacattgagcacgccatgttggctcagcaggaacaagaacagagaagaatggagaga
attctggctgaaggacaaagccggaaccaacagttccaggaccagctggttcagcagctc
gtccagactctgaacaacagtctctgcaaccggctagacaaagttttgcgtgaagaaatg
aagaagaccgtcccacaggccatatcgaagagtctagatcctgtgactggccagatgagc
agcaccatcgctgccaagttaaccgcagtggaaggaacactgaaggaaaatgtcaccaaa
gtagttaaatccaagaacactacggatgctatcggtcgtgccgctgcagaggccatgcag
ggccccatccaggcggcctacaaagagaccttccagagcatcgtgctgcccgtgtttgag
agaggctgccagtccatgtttcagcagatcaatgacagcttcaaacagggaaccaacgag
tacatccaacagctggagacacacatcaagaacaggaaacagcgggaccaggatgcacgg
gatcctgtgattggccagctgcaacagatgattgacacgctccagaattctcaagaccag
ctggccaccactgtgacggccagcgtgtgctctgacgttcagcatcagctccacatgatc
gtgggaaatctgcaggactcgatcctgatgcaggtgcagcgcatagtgaagggagaggtg
agtctggccatgaaggagcagcaggcagctgtcacctccagcatcatgcaggccatgcgc
tcggccgcaggaacacctgtaccctccgcacatctggactaccaggcccagcaggccagc
atactgcagttactacagcagggccagctcaatgaggccttccaacaggctttatctgca
gcagacttgaatctggtgctatacgtgtgtgagaccattgactcccagcaagtgttcggc
cagcagccctgtccactccatcaggccgtccttctgtctctcatccagcagctctccacc
aacctgagcacacgcacagaactcaagatcagctatcttgaagatgctgtgatgaacctg
gaccatggagatccagtcaccagagaccacatgtctgcagtgctgtcccaggtacgacag
aagctgttacacttcctgcagcaggacgcccacagccctctttgcaagcgtgctcggcgc
ctcatgatgatgctgcagggcctggtcaatcactag
DBGET
integrated database retrieval system
