KEGG   Sinocyclocheilus anshuiensis: 107696518
Entry
107696518         CDS       T04917                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein-like
  KO
K12857  Prp8 binding protein
Organism
sanh  Sinocyclocheilus anshuiensis
Pathway
sanh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sanh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107696518
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sanh03041]
    107696518
Spliceosome [BR:sanh03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    107696518
 Complex C
   U5 SnRNP specific factors
    107696518
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WDR55 EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML NBCH_WD40 Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_SPT8 WDR90_beta-prop_4th Beta-prop_EIPR1 ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_WDR75_2nd Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Cytochrom_D1 WD40_like KNTC1_N Beta-prop_Nup120_160 Beta-prop_LRRK2
Other DBs
NCBI-GeneID: 107696518
NCBI-ProteinID: XP_016352363
LinkDB
Position
Unknown
AA seq 345 aa
IEPKKRGAEMAVVPAGVKRPRTELVAAAQFQLSAMGPPRSSSVQAPIMLLFGHEGEVYCC
KFHPNGATLASSGYDRLILLWNVYGDCENYATLKGHSGAVMELHYNTDGSLLFSASTDKT
VCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQN
TYQVLSVTFNDTSDQIISGGIDNDIQVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLS
NSMDNSVCVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSSDGSKIAAGSADRFVYIW
DTTSRRILYKLPGHAGSVNEVVFHPEEPTVLSGSSDKRLYIGEIQ
NT seq 1038 nt   +upstreamnt  +downstreamnt
atcgaaccaaagaagcgcggcgcagagatggcagtcgttcccgccggagtgaagaggccc
cggacagagctggtggctgcagcgcagttccagctctctgctatgggccccccacgcagc
tccagtgtgcaggctcctataatgctgctctttggtcatgaaggtgaagtatactgctgc
aaatttcaccctaatggagccacgttagcctcctctggatatgaccgcctcatcttgctg
tggaatgtatatggagactgtgaaaactatgcaacacttaaaggccacagtggagctgtg
atggagcttcattataacactgatggcagtctgctcttttcagccagtacggacaagacg
gtgtgtgtgtgggacagtgagacaggggagcgtgtgaagcgtctgaaaggacacacgtcc
tttgtgaactcatgttttccggctcggcgcggcccacagctggcctgtacgggcagtgat
gatggaactgtaaagctgtgggacatcaggaagaaggcctctgttcacactttccagaac
acatatcaggttcttagtgtaacattcaatgataccagtgaccagatcatctcaggaggc
atcgacaatgacatccaggtatgggacctcagacagaacaaactgatttacagtatgcag
ggtcatggagactctgtgacaggtctgagtctcagtgcagacgggtcttaccttctgtct
aactcaatggataacagcgtgtgtgtctgggatatccgtccatttgcaccaaaggagagg
tgtgtgaagatctttcagggaaatgtccataactttgagaagaatcttctcagatgctct
tggtcttctgatgggagtaagattgcagctggttctgctgacaggtttgtgtatatttgg
gacacaacatcccgtaggatcctttataagctccctggtcatgctgggtctgtgaatgag
gttgttttccatccagaagaaccaactgttctttctggatccagtgataaacgtctttac
atcggagagattcaataa

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