Sinocyclocheilus anshuiensis: 107699613
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Entry
107699613 CDS
T04917
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107699613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sanh03041
]
107699613
03009 Ribosome biogenesis [BR:
sanh03009
]
107699613
Enzymes [BR:
sanh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107699613
Spliceosome [BR:
sanh03041
]
Complex A
U2 snRNP components
U2 related factors
107699613
Complex B
107699613
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
107699613
Ribosome biogenesis [BR:
sanh03009
]
Eukaryotic type
90S particles
Helicases
107699613
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
Glyco_hydro_98M
nSTAND3
AAA_25
SRP54
Flavi_DEAD
Atrophin-1
AAA_29
DUF3915
Motif
Other DBs
NCBI-GeneID:
107699613
NCBI-ProteinID:
XP_016356419
UniProt:
A0A671RH35
LinkDB
All DBs
Position
Unknown
AA seq
763 aa
AA seq
DB search
MSKRHRLDLGDDYSSSKKRSSDGKDRDRDRDDRSKDRDRDRDRDRDRDRDRDRDSKVSSV
PLSSSVSGGGMLPLKQTAMQQQINPFTNLPHTPRFFEILKKRLQLPVWEYKERFNDILNR
HQSFVLVGETGSGKTTQIPQWCVDMVRALPGPKRGVACTQPRRVAAMSVAQRVADEMDVM
LGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDIL
MGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDSCPLLTIPGRTHPVEIFYTPEPERDYL
EASIRTVVQIHMCEEDEGDVLLFLTGQEEIDEACKRIKREIDDLGPDVGDIKIIPLYSTL
PPQQQQRIFEPPPPRKPSGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIR
VESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVL
QLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLVALNDDGDLTELGSMMAEFPLDPQLA
KMVIASCDFNCSNEILSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTLLNVYH
AFKQNHESVQWCYDNFVNYRSLMSADNVRQQLSRIMDRFSLPRRSTEFTSRDYYINIRRA
LVTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTD
IKPEWLVKIAPGYYEMSNFPQCEAKRQLERIVAKLQTKEYSQY
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacggcaccggttggacttaggcgatgattattcgtcgagcaagaagaggtca
tctgacggtaaggaccgagaccgagatcgggacgaccggtcgaaggatcgcgatcgcgac
cgtgacagagacagagaccgtgatcgagaccgggatagagacagcaaggtgtccagtgtg
cccctcagctccagcgtgtccggcggtgggatgctcccgctgaagcagacggccatgcaa
cagcagatcaaccccttcaccaacctgcctcacacgccgcgcttcttcgagatcctcaag
aagaggctgcagctgcccgtctgggagtacaaagaacgcttcaatgacatcctcaaccga
catcagagctttgtgctcgttggagagacaggctctggaaagaccacacagatccctcag
tggtgtgtggacatggtgagggcccttcccggccccaagcgtggtgtggcttgtacacag
ccacgtagggtggcagccatgagtgtggctcagagagtggcagatgaaatggacgtcatg
ctggggcaggaggtcggatactccatcagatttgaggactgtagctctgcaaagaccatt
ctgaaatatatgacagacggtatgttgctccgcgaggctatgaacgacccgctgctggag
cgatacggtgtcattattctcgatgaggctcacgagcgcactttagccacagatattctg
atgggcgtcctcaaagaagtggtccggcagagatccgacctcaaggtcatcgtaatgagc
gccactctggatgctggaaagttccagatttatttcgacagctgccccttgctgaccatt
cccggccggacgcatcccgtggagatcttctacacgcccgagccggagagggattaccta
gaagcatccattcgcacggtcgtccagatccacatgtgtgaggaagatgagggagatgtg
ctgctcttcctcaccggacaggaggaaatcgacgaagcctgcaaacggatcaaacgtgag
attgacgatctcggccccgatgttggcgacatcaaaatcatcccgctctactccacgctg
ccaccacagcaacagcagaggatcttcgagccgcctccacctcgcaaacccagcggagcc
atcggcaggaaggttgttgtttctacaaacatcgctgagacatccctgaccatcgatggc
gtggtgtttgtaattgatcctggctttgccaagcaaaaggtgtataaccctcgcattcga
gtcgagtcgctgctcgtaacggctattagtaaggcttcggcccagcagagagccggccgt
gctggacgtacacgcccaggaaagtgcttccggctctacaccgagaaggcctacaagact
gagatgcaggataacacataccctgagattctcaggtcgaatttgggctctgtggtgcta
cagctcaagaagctcggtatcgatgacctagtgcactttgacttcatggacccaccagct
cctgagaccctgatgcgagccctggagctgttgaactatctggtggcgctgaatgacgac
ggtgacctgacggagctgggctccatgatggctgagttccctctcgacccccagctggcc
aagatggtcatcgctagctgcgacttcaactgctccaatgagatcctgtccatcaccgcg
atgctatcagtcccacagtgctttgtgcggcccaccgaagctaagaaggcagccgacgag
tccaaaatgaggttcgcccacatcgacggggaccacctgaccttgctcaacgtctaccat
gccttcaaacagaaccacgagtcggtgcagtggtgctatgataacttcgttaactaccgc
tcgctgatgtcggctgataacgtgcggcagcagctctcacgcatcatggaccgcttcagc
ctgccgcgacgcagcacagagttcaccagccgagactattacatcaacatccgccgcgct
ctcgtcaccggcttcttcatgcaggttgctcacctggagcgcaccggccactatctcaca
gtgaaggacaaccaggtggtccagttgcacccttccaccgtactggaccacaagcccgag
tgggttctctataacgagtttgtgctgaccaccaagaactacatccgcacctgcactgat
atcaaacccgaatggctggtgaaaatcgctccaggatactacgaaatgagcaacttccct
caatgcgaggctaagaggcaactggagcgcatcgtcgctaaacttcaaaccaaggagtac
tctcaatactga
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