Sinocyclocheilus anshuiensis: 107699677
Help
Entry
107699677 CDS
T04917
Name
(RefSeq) tetratricopeptide repeat protein 37-like
KO
K12600
superkiller protein 3
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107699677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanh03019
]
107699677
Messenger RNA biogenesis [BR:
sanh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
107699677
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_16
TPR_8
TPR_11
TPR_14
TPR_19
TPR_17
TPR_12
TPR_CcmH_CycH
TPR_9
ANAPC3
TPR_7
TPR_MalT
RPN7
TPR-S
SHPRH_helical-1st
HAT_Syf1_CNRKL1_N
ARM_TT21_C
HAT_PRP39_N
TPR_15
PknG_TPR
Motif
Other DBs
NCBI-GeneID:
107699677
NCBI-ProteinID:
XP_016356498
LinkDB
All DBs
Position
Unknown
AA seq
1531 aa
AA seq
DB search
MSSKEVKAELKSAREAIKNKGFKEALKHCKAVLKLEKNNYNAWVFIGVAATELQQLDQAQ
TAYRKATELEPEQLLAWQGLANLYEKSDQADFKAELPKIYQKLITLYETSDKAKCFEVSK
KLVEVYQSEKNYLQVARVWRRLIQVREAEEGVEDLELLELWREMTRLLQDTVEDQDNETQ
QHLISAFERALQLMIDVPSEAHRSLSQDYIKCLSKLPHEVAKLKEVCDATLSRYPTHSYP
LEALSEHYIRTGDCSEEAACCFSRLSELDPNNSHAHFGLGIKACQDKKYEDAIKSISLGL
KRMRSSIIGWYNLALAQLKMHKYSDSATASSQGLKSSVGNSDDWTHKLQRLKLEALVRTG
RDQDAEEALQILTQISDAKNDPVLLALKGRAHLQKGQTEEAFQVSAELLSSHPGSVEGLT
LKGLVHVAKEQHKQAEESFLEALSGSPDNGELFFLMGCLFWNMGEEIRRDRSKAHTHLLK
AAKLDPYLGSVFRFLGHYYREVAKDQGRARGCYKRAFELDSSDAESGAATVDLSMEQGDM
DSALTVLQSVTERATPGSAKWAWMRRGLYHLKIGQHQQAIADLQAALRADPQDWVCWECL
GEAYLNRRSFTAALKAFDKAHTLQPTSVYSLYQTAAIKQILGRFKEAAAEYRQILEQEDY
VPALKGLGECLLALARSALDDYLDGRAVDLIQNAIHYLLRALKQRPDLSCLWKLLGDACT
TSRTVSPNRAKVLVPGALCGMDPLDQGHTLDQRQLLTLGERCFGHALKLMPEAPSLWCDL
GLNYYHQSRLLSCLNPEEDQQPLLEKAIQCVKKAIMLDSANHTYWNALGVVSMAKGIENF
ALAQHCFIKSVKAESNNVVAWTNLGALYLKKGNIELSHEAFKIAQSLEPLYVNCWIGQAL
IAESVGSYDTMDLFRHTTELSTHTEGVKGYAYWVYSTLLDRSNRDSEIYLYNIVQMNAVS
AAQVALSKYTERVQTDPDSFIMLGYLNTHLQLRKQATEAYRRAVELLQASPHTDKLSFAL
RGYGRALSDDGQWEEAVHIYSSTPLEELHDLIGLALAYFRIGRMPESVQAYEKALAVASS
EKEKACILTALALIQHRLGNIDHAKTLLFKCSMLKEPVSESLQCLCSLGLVHGDVTLASA
TLTELLKLGERVGGAVEEHCLLTCTLLALQGNYSGVHREAARAIHRPFNVQRALLYSGVN
QLASGRHSGEDKRRNALKTIQRAVLLCPDDPAGWAGLMAACHTENTACLLQGSAPHREDL
ERAHMTLVSEKVKGLQAEDGLLAQALEGWVLQQAVTGLKQSGQYDQAETLCSQVLSVSPE
QPVVFLMLRQVQCERLLLSDSGNCVPPAVLDQLSAAVMANHTSVSAWHWLAEVYRSQGLL
AQASVAYRQSLQLASQLGDNIGKMSSLLRLALLALMPCLAGVCVSEWKDLVLEASTEVLK
MGSSPVALLFQALLQFSIKMGARETRRLLEKIVYASASGGSETIASVARWYLLRHLHAKD
DLELIDTLLVNATAEGDSRLMDFHRRLYPSS
NT seq
4596 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtaaagaagtaaaagctgaactaaaaagtgccagagaagccatcaaaaataaa
gggtttaaagaagctttgaaacattgtaaggctgttctcaaacttgagaagaataactat
aatgcctgggtgtttattggagtggcagctacagagctgcagcagctggatcaggcacag
accgcctacagaaaggccactgaactggagccagagcaactgcttgcatggcagggttta
gcaaatctgtatgaaaaaagtgaccaagcagatttcaaagctgagctgccaaagatttac
cagaaacttattacactgtatgaaacctcagacaaagcgaaatgttttgaagtgagcaag
aagttggtggaagtctatcagtcggagaagaactatttacaggtggcccgagtgtggagg
aggttaatccaggtgagggaggcagaggaaggggtggaggatttagagctgctggagctg
tggagggagatgaccagactcttgcaggacacggttgaggatcaggacaatgagactcaa
caacacctgatatcagcatttgaaagagctttgcaattgatgatagatgtgcccagtgaa
gcccacaggagcctttcacaggactacattaaatgtctttccaagcttcctcatgaggtg
gccaaactaaaggaagtttgtgatgccacgctgtcccgctatccgacacactcctaccct
ctagaggccctcagtgagcactacatcagaacaggtgactgcagtgaggaagctgcgtgc
tgtttcagccgtctctcggaactggatccaaacaactcacacgctcactttggtcttggt
attaaagcttgtcaggataaaaaatatgaggatgccatcaaaagtattagtctaggattg
aagcgtatgcgctcctccatcattggctggtataatcttgctctggctcaactaaaaatg
cataaatactctgacagtgccacagcttccagccaagggctgaagtcgagtgtggggaac
tctgatgattggactcataagctgcagaggttgaaactagaggctctggtaaggacagga
agagaccaggatgctgaggaagctctgcagatccttacacagatttcagatgccaaaaat
gacccagtgcttttagctttgaaaggaagagcccacttgcaaaaaggccaaactgaggaa
gcatttcaggtttcagctgagctgctgagctctcacccaggatctgtggagggtctcact
ctgaaggggttggtgcatgttgcgaaagaacagcacaaacaagctgaagaaagctttcta
gaggctttatccggtagcccagataatggggagttgttcttcctgatggggtgcctgttc
tggaacatgggagaggaaatacgaagggatcgcagcaaagcccatacacatttactcaag
gctgctaaactggacccgtatctcggttcagtgtttcgttttctgggtcattactataga
gaggtagcaaaagatcagggcagagccagaggctgctataagagagcgtttgagctggat
tcctctgatgcagagtctggagcggctactgtagacctcagcatggagcagggggacatg
gactcagctctgactgttctgcagtctgtaacagagagagccactcctggctctgctaaa
tgggcttggatgaggagagggctctaccacctcaagattggccagcatcaacaggccatt
gcagatctgcaggcggcattgagggcagatcctcaggattgggtgtgctgggaatgttta
ggtgaggcttaccttaaccgcaggagtttcacagcagccctgaaagcattcgataaagca
catactctgcagcccacctccgtctacagcctctatcagaccgctgccatcaaacagatc
ctcggccggtttaaagaggccgctgcagagtacaggcagatcttagagcaggaggactac
gtgccggcattgaaaggtctgggtgaatgcttgctagccttggctagaagtgcacttgat
gactatcttgatggaagagctgtagatttgatacagaatgccatccattaccttttaaga
gctttaaagcaaaggccagacctgtcgtgtctgtggaagttactaggtgatgcctgcacc
acctccagaactgtgtccccaaaccgagccaaagtgctggtgcctggagctctatgtgga
atggatccacttgatcagggccatacactggaccagagacagctcctcactctaggagaa
aggtgctttggtcatgctttgaaactcatgccggaggcccctagtctgtggtgtgacctt
ggcctgaactactaccaccaatccagactgctcagctgcctcaatcctgaagaggatcag
cagcctctgctggagaaagccatacagtgtgtgaagaaggcgatcatgctcgacagtgca
aatcacacatactggaatgccctcggggtggtctccatggcaaagggaatagaaaacttt
gcacttgcacaacactgctttatcaaatcggtaaaagcggagtcaaataatgtggttgca
tggaccaaccttggtgctttgtatctgaagaagggaaatatagagctctcgcatgaagct
tttaagattgctcagtctctagaacccctctatgtgaactgctggatcggacaggccctg
attgctgagtcagtgggcagttatgacaccatggatcttttcagacacaccacagaactg
agcactcataccgagggagtgaagggttatgcatattgggtttactccacactgctggac
aggagcaacagagactcagagatctacctctacaacatagtccagatgaacgctgtctct
gctgcccaggtggctctgagcaagtacaccgagagggttcagacagacccagactccttc
atcatgctcggatacctgaacacacacctgcagctgaggaaacaggccactgaggcatat
cgcagagctgtcgagttgcttcaggcatcccctcacacagataagctcagctttgctctg
aggggttatggacgtgcactcagtgatgatggacagtgggaagaagcagtgcatatttat
tcctcgacaccactagaggagctgcatgatctcattgggctggcgcttgcctatttcaga
atcggtcgcatgccagaaagtgttcaggcctatgagaaagccctcgcagttgcctctagt
gagaaggaaaaggcctgtatactcactgcactggccctgatacagcacaggctgggcaac
attgatcatgccaaaactcttctcttcaagtgctccatgctgaaagagcctgtctcagag
agtctgcagtgtctgtgttctctgggtttggttcatggggatgtgaccctagcaagtgct
acgcttactgagctgctaaaactgggggaacgtgtaggaggcgctgtggaggagcactgt
ctgctcacttgcaccctgctggccctgcagggcaactatagtggcgtacacagggaggct
gctagggctatacacagacctttcaatgtccagagggcgttgctgtacagtggagtgaat
caactggcctcaggccggcactctggtgaggacaaaagacgcaacgctctgaaaacaatc
cagagagctgtgctgctgtgcccagatgatcctgctgggtgggcggggctaatggctgcc
tgtcacacagagaacactgcatgcttactccaaggctccgcccctcacagagaagatctg
gagagggcgcacatgactctggtgtctgaaaaagtgaagggcctgcaggcagaggatggg
ctcttggctcaggctctggagggatgggtgctgcagcaggccgtgactggactcaaacag
agtggccaatatgaccaggcagagactctctgctcccaggttctgagtgtatctccagag
caacctgtggtgttcctgatgttaaggcaggttcagtgtgagcgcctcctgttgtctgac
tccggtaactgtgttcctcctgcggtgctggatcagctcagcgctgctgtcatggccaac
cacacatctgtgtccgcctggcattggttggcagaagtgtaccgttctcagggtctgctg
gctcaggcctctgtggcatatagacagagtcttcagctggcctctcagctcggtgacaac
attggaaagatgagcagtctgctccgactagccctgctggcactcatgccgtgtttggct
ggtgtctgtgtctctgagtggaaggatctggtgttggaggccagcactgaagttttaaag
atgggcagctcaccagtagctctgctcttccaagccttactgcagttctctataaagatg
ggtgccagggaaacccgtcgcctgttggagaaaatagtttatgcttcagcctcaggcggc
tctgaaacaatagcatcagtggcacgctggtacctcctgcgccacctgcacgccaaagat
gacctggagctgatagatactctgttggtgaatgcaacagcagaaggagacagcagactg
atggatttccacagacgcctttacccatccagctga
DBGET
integrated database retrieval system
