Sinocyclocheilus anshuiensis: 107699861
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Entry
107699861 CDS
T04917
Symbol
pms2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03430
Mismatch repair
sanh03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
107699861 (pms2)
03460 Fanconi anemia pathway
107699861 (pms2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sanh03400
]
107699861 (pms2)
DNA repair and recombination proteins [BR:
sanh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
107699861 (pms2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
107699861
NCBI-ProteinID:
XP_016356749
LinkDB
All DBs
Position
Unknown
AA seq
851 aa
AA seq
DB search
MSDSSTGSAGAIKAIDKQSVHQICSGQVVLSLATAVKELVENSIDAGATNVDVKLKDSGI
ELVEVSDNGKGVEEQNFEGLTLKHHTSKLRDFSDLIHVETFGFRGEALSSLCALSDLSVV
TCHESAQIGARLVYDHDGHLTQHVPHPRQHGTTVTLQKLFSTLPVRHKEFQRNIKKEYSK
MIFVLQSYCIISTGVRITCANQTGQGKRTTVLCTSESNSMRDNIGAVFGPKQLQSLIPFQ
QISPGESIKEDYGLGEVDVPKDLFVIDGFVSQADHGVGRSATDRQFFFINKRPCDPVKAS
KLVNEVYHMYNRHQYPFVALNITVASDCVDVNVTPDKRQILLQEEKLLLAILKSSLIAMF
ETGVNKISLNHITPAITNLCRPTETSAGSEDREIGSVSEALPDDEPPKTSISLARLKEAF
SNHQFPGIGSKQSSHKAACSGSSQKKMFSFVSCSKKMTDIMRPPLKSSPSFAAVSSIKKS
TVCLAKYKSTFDGDAEDSEAANQNSAEDDPEILHENNSESGLHPSIYETDVKAETINEPV
DEKFCSYKPLVPETKSEQHQDRISSPEAKRARHEAEPLAQNCLVDSKNKNASTKLDSPVS
IQKKTVLLQFSLQELSKRMQRLQAQKKENNDQEPKYRRFRANINPGENQSAEDELKKEMS
KDMFKDMEIIGQFNLGFIITKLKSDLFIIDQHATDEKYNFEMLQKNTVLKGQRLIAPQSL
HFPAISETVLMENLEIFRNNGFDFLIDEDAQVMERVKLVSLPTSKNWTFGPSDIEELIFM
LSDSPGIMCRPSRVRQMFASRACRKSVMVGTALNTSEMKKLVLHMGEIEQPWNCPHGRPT
MRHLANLDMVS
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactcaagcacaggttctgctggagccataaaggcaatagacaaacagtctgtg
catcagatctgctctggacaggtggtgctgagtctggccacagctgtgaaagagctggtg
gagaacagcattgatgctggtgccactaatgtcgatgtcaagctaaaagacagtggaata
gagttagtggaagtttccgacaatggaaaaggtgttgaggagcaaaactttgagggacta
actttaaaacatcacacctctaaactaagagatttttccgacctgatacacgtggagacg
tttgggttccgtggtgaagctctgagctcactttgtgctcttagtgatcttagtgttgtg
acctgccatgagagcgctcagatcggagctcggctggtgtatgaccatgatggtcatctc
actcagcatgtgccgcatccccgccaacatggcacaactgtcactctgcagaaactcttc
tccacattacctgtccgacacaaggagttccagcgcaacatcaaaaaggaatattccaag
atgattttcgtcttgcagtcctactgcatcatctccactggtgtgcgtattacatgtgcc
aaccagacgggacaaggcaagcgcaccacagtactgtgcaccagtgagagtaacagcatg
agagacaacattggagctgtgtttggacctaaacagctacaaagtttgattcccttccaa
caaatatctcccggtgaatcaattaaggaagactatggtctcggggaggtagatgttcct
aaagacctttttgtcattgacgggtttgtgtcacaagcggatcatggtgttggtcgaagt
gctactgacagacagttcttctttatcaataaaagaccctgtgatccagtaaaggcctcc
aagcttgtgaatgaggtttatcacatgtacaatcggcatcaatacccttttgtcgctcta
aacatcactgttgcttcagactgtgtggacgtgaatgtgactccagacaaacgtcagatc
cttctacaagaggaaaaactcttgctggcaattctgaaaagctcactcattgctatgttt
gagactggtgtcaataaaatcagtctcaaccacattactccagcaattaccaacttgtgt
agaccaaccgagacaagtgctggttcagaagatcgggaaataggttctgtctctgaagca
cttccagatgatgaacccccaaagacttccatcagtcttgctcgacttaaagaagcattt
tcaaaccatcagtttcctggaattgggtcaaagcagtctagtcataaagctgcctgttct
ggttcctctcagaagaagatgttttcctttgtgagctgctctaaaaaaatgacagacatt
atgaggccacctttaaagtcctctccaagtttcgctgccgtttcttccataaaaaaatca
actgtttgtctagctaaatataaaagcacctttgatggtgatgctgaagattctgaggct
gcaaaccaaaattcagctgaagatgatccagagattttacatgaaaacaattcagagtca
ggtttacaccctagtatatatgaaactgatgttaaagctgagactatcaatgaacctgta
gatgagaagttctgtagttataaacctttggtgccggagacaaagtcagagcaacaccag
gacagaatttccagtcctgaagctaaaagagctcgacatgaagctgaacctctagcacaa
aactgtttggtggactctaaaaacaagaatgcttctacgaaattggattcacctgtcagc
atacagaagaaaacagtgcttttgcagttttctctacaggaactttctaaaaggatgcag
aggctgcaggctcagaagaaagagaacaatgatcaagagccaaaatatagacggttcagg
gcaaatattaaccctggtgaaaaccagagtgctgaggacgagcttaagaaagaaatgagc
aaagatatgttcaaggatatggaaatcattggtcagttcaacctgggttttattatcacc
aagctgaaatctgaccttttcataattgaccagcatgccacagacgaaaagtacaatttt
gagatgctacaaaagaatacggtcttaaagggacagcgactcatagctccacaaagtctc
cacttcccagctatcagtgaaactgtgctcatggaaaaccttgaaatcttcagaaacaat
ggttttgacttcctcattgatgaggatgctcaggttatggagagggtgaagctggtgtct
ttacctacaagcaagaattggacctttggcccaagtgacattgaagaactcatcttcatg
cttagcgacagtcctggaatcatgtgtcgaccttctcgtgtgaggcagatgtttgcatcc
agggcatgtcgcaaatcggtgatggttggcactgccctgaacaccagtgaaatgaagaaa
cttgtgcttcacatgggggaaattgaacagccctggaattgtccacatggtagacccacc
atgagacaccttgctaatctggatatggtttcttag
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