Sinocyclocheilus anshuiensis: 107700859
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Entry
107700859 CDS
T04917
Name
(RefSeq) exosome complex component CSL4-like
KO
K07573
exosome complex component CSL4
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107700859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanh03019
]
107700859
Messenger RNA biogenesis [BR:
sanh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
107700859
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
107700859
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
PCB_OB
Motif
Other DBs
NCBI-GeneID:
107700859
NCBI-ProteinID:
XP_016358171
UniProt:
A0A671KDM6
LinkDB
All DBs
Position
Unknown
AA seq
204 aa
AA seq
DB search
MKTRLSLLENMSPMKLCVPGERLCSTEDCIPGTGTYLRHGYIFASLAGYVLRKNEGEELP
VISVVRETEAQLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRREDVRAT
EKDKVETYKSFRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMVPISWCE
MQCPRTHAKEFRKVARVQPEYLQA
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgcggctgtctcttcttgaaaacatgtcgcccatgaagctgtgtgttccaggt
gaaaggctctgcagcacggaggactgtatccccggcaccggcacgtatctgcggcacggc
tacatcttcgcttcgctcgcgggatacgtgctgagaaagaacgagggagaggagctcccg
gtgatttcagtcgttagggagacagaagcacagcttttgcctgacgttggtgccattgtc
acctgtaaggtgacgagtatcaacccacgatttgctaaagtccacatcttatatgtgggg
tcgacaccgctaaaagacaggtttagaggcacgatcagaagagaagacgtgagagcgaca
gagaaagacaaggtggagacgtacaaaagcttcaggccaggcgacattgtccttgcaaaa
gtgatctctttgggcgacgtgcagtcgaactacctgctgaccacagcagagaacgagttg
ggcgtagttgtggcccacagcgaggcgggcgctcagatggtgcccatcagctggtgtgag
atgcagtgtccacgcacacacgccaaagagtttcgcaaggtcgcgcgggtacagccggag
tacctgcaggcctga
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integrated database retrieval system
