Sinocyclocheilus anshuiensis: 107701630
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Entry
107701630 CDS
T04917
Name
(RefSeq) PAB-dependent poly(A)-specific ribonuclease subunit PAN3-like
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107701630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanh03019
]
107701630
Messenger RNA biogenesis [BR:
sanh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107701630
mRNA degradation factors
3'-5' decay
Pan complex
107701630
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
zf-CCCH
zf-CCCH_4
zf_CCCH_4
Torus
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
107701630
NCBI-ProteinID:
XP_016359156
LinkDB
All DBs
Position
Unknown
AA seq
774 aa
AA seq
DB search
MNSGLPASAAPLGGVGIPGVKVKFCRYYAKDKTCFYGDECQFLHEDPSMASLSLHGGGTG
AGGGGSPVSLSLAGGAVTAAGYVLGSSAASGAPANVPKKNDSLGPAGTALEGQLLSIPGM
EGGALNDASLTNSYFSSTFIGVNGFGGPAESKYSMMQRMTISSSSPSLLNDGAKSFSHNT
HDPVNSPASSLFSDFGALSISQRRKAPNPTASEFVPKGAPRMASMSQTTVPAAFASPIFP
HPGLSSSTAAALAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTPNPNPANYMVPTSASD
QGGAAHVIQKETVGGTTYFYTDNTPAPLAGMVFPTYHMYPQTAPHVAYMQPKANAPSFFM
ADELRQELINRHLITMARIDQSENLGVPSEVDSYHSLFPLEPLPPPNRLQKTSNFSYITS
CYKAVNSKDDLPYCLRRIHGFRLVNTKCMMLVDMWKKIQHSNTVTLREVFTTKAFGDHSL
VFSYDWQHELPPPRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACRVMDPSKILITGKT
RLRVNCVGMFDVLTFDNSQTNHLALMPQYQQADLISLGKVVLALACNSLAGIKRENLQKA
MELVSINYSSDLKNLILYLLSEQSRLRSVNDIMPMIGARFYTQLDASQMRNDVIEEDLAK
EVQNGRLFRLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGTPWIDLS
HIVSCLNKLDAGAPEKVSLVSRDEKSVLVVTYSDLKRCFESTFQELLAATNGPL
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtggactcccagcttcagctgctccgctcgggggtgtcggaatacccggtgtg
aaggtgaaattctgccgttattatgcgaaagacaagacttgtttttacggagatgaatgc
cagtttctgcacgaggacccgtccatggcgagcctttctctgcacggtggtggtacaggt
gctggcggaggaggaagccccgtctctttatctctcgccggaggagcagtgacggcggcg
ggatacgtgctcggaagtagcgcggccagcggcgctccggcaaacgttcccaaaaagaac
gattctctcggtcccgcgggaacagctctggagggacagctgttgtccatccctgggatg
gagggaggtgctctgaatgatgccagtctgaccaactcgtacttcagcagcacctttatt
ggggtcaatgggtttggaggcccagcagagtccaaatattcaatgatgcagaggatgacc
atcagtagcagttctccgagtctgctgaacgatggtgccaagagcttcagccacaacaca
catgatccagtaaattccccagcgtcatctctcttcagtgattttggtgctttaagcata
tcacaaaggagaaaggctcctaaccccacagccagtgagtttgtacctaaaggggcccca
cggatggcctccatgtctcagacgaccgtgccagcagcattcgcctcccccatcttccct
catcctggcttgagcagctccacagcggctgctcttgcacctggtatgtcactctctgct
gggtcatctcctcttcactcccccaaaatcacccctcacacctctccagccccacggcgg
cgcagtcacacacccaaccccaacccagccaattacatggtgcccaccagtgcatctgat
cagggaggtgcagcccacgtgattcaaaaggagactgtgggtgggacaacttacttctat
accgacaacacccctgctcctttggccggaatggtgttcccaacatatcacatgtatccg
caaacggcacctcatgtggcatacatgcagccaaaagccaatgcaccatccttctttatg
gctgacgaacttcgacaggagctgattaacaggcatttgataacgatggcacggatagat
cagtctgagaaccttggagtgccgtctgaggtagacagttaccacagcctctttcccctg
gagccccttcccccaccaaaccgtcttcagaaaaccagcaacttcagttacatcacttcc
tgttacaaggcagtcaacagcaaagatgacctgccttactgcctcaggaggatacatggc
ttcaggctggtcaacaccaagtgtatgatgctggtagacatgtggaagaagattcagcac
tccaatactgtgaccctccgagaggtcttcaccaccaaagcatttggagaccactcactg
gtattttcctatgactggcagcatgagctccctcctccacggcagcatgcgggcctgtta
ccggagtcgctgatttgggcctacattgtccagctgagctcggcattgcgcaccattcac
acggctgggctggcctgcagggtcatggaccctagtaagatcctcatcactggaaagaca
cggttacgagtcaactgtgtaggaatgtttgatgtcttaacatttgacaatagtcagacc
aaccacctggcgctgatgccccagtaccagcaagcagatctcatctccctggggaaggtg
gtgttggctctggcgtgtaactctctagctggcattaagagagaaaatttgcagaaggcc
atggagctggtgtcaatcaactactcatctgacctcaagaacctcattctgtacctgctc
tcggaacaaagccgtctgcgcagtgtcaatgacattatgcccatgattggagcacgattt
tacactcaactcgatgcctcgcaaatgagaaacgatgtcattgaagaggacctggccaag
gaggttcaaaatggacgattgttccgcctactggcaaagttgggaacgatcaacgagaga
ccagagttccagaaggacccaacgtggtctgagactggtgaccgttatctgctgaagctc
ttcagagatcacctgttccaccaggtaactgaggcaggcacgccctggatcgacctcagc
cacattgtgtcctgcctcaataagttggatgctggagcaccggagaaggtcagtctggtg
tcacgggatgagaagagcgtgcttgtggtgacttactcagacctaaagcggtgctttgag
agcaccttccaggaactgctggccgccacgaacggtcccctgtaa
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