Sinocyclocheilus anshuiensis: 107702040
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Entry
107702040 CDS
T04917
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03013
Nucleocytoplasmic transport
sanh03015
mRNA surveillance pathway
sanh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107702040
09122 Translation
03013 Nucleocytoplasmic transport
107702040
03015 mRNA surveillance pathway
107702040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanh03019
]
107702040
03041 Spliceosome [BR:
sanh03041
]
107702040
03009 Ribosome biogenesis [BR:
sanh03009
]
107702040
03012 Translation factors [BR:
sanh03012
]
107702040
Enzymes [BR:
sanh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107702040
Messenger RNA biogenesis [BR:
sanh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107702040
mRNA cycle factors
Stress granule specific factors
107702040
Spliceosome [BR:
sanh03041
]
Complex C
Other components
EJC/TREX
107702040
Ribosome biogenesis [BR:
sanh03009
]
Eukaryotic type
90S particles
Helicases
107702040
Translation factors [BR:
sanh03012
]
Eukaryotic type
Initiation factors
eIF-4
107702040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
AAA_30
TniB
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
107702040
NCBI-ProteinID:
XP_016359709
UniProt:
A0A671MMS8
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MAAAAVPVRKRLLKEEDMTKIEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQ
QRAIKQIIKGRDVIAQSQSGTGKTATFCISVLQCLDIQVRETQALILAPTRELAGQIQKV
LLALGDYMNVQCHTCIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLV
LDEADEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVS
SMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI
GRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQVDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccgcagttcccgtgaggaagaggctcctgaaggaggaagacatgacgaaa
atcgagtttgagacgagcgaagaggtggatgtgacgccgacgtttgacacgatgggcctg
agggaagatttactgcgcgggatctacgcgtacggttttgagaaaccgtcagccatccag
cagcgagccatcaagcagatcatcaagggacgagacgtgatcgcccagtcacagtctgga
accggtaaaacagccacgttctgtatctcagtgctgcagtgtttggatattcaggttcga
gagactcaagcgctgattttggctccgaccagagagttagcaggacagatccagaaggtg
ctgctggcgttgggcgactacatgaacgttcagtgtcacacctgtatcggaggcacaaac
gtgggcgaggacatccggaagctggactacggtcagcacgtggtggctggaacgcccggc
cgagtgttcgatatgatccgcaggaggagtttgaggactcgtgccattaagatgctggtg
ttggatgaagcagatgagatgctcaacaaaggttttaaggaacagatctatgacgtgtac
cgatacctgccgcctgccacgcaggtgtgtctcatcagtgccacgctgccacacgagatc
ctggagatgaccaacaagttcatgaccgaccccatccgcatcctggtcaaacgtgatgaa
ttgacgctggagggtattaagcagttttttgtggctgtcgagcgagaggagtggaagttc
gacactctgtgtgacctttacgacacgctgaccatcacacaagctgtcatcttctgcaac
accaaacgcaaggtggactggctgacggagaagatgagggaggcgaacttcaccgtgtcg
tcgatgcatggagacatgccacagaaagagcgagagtccatcatgaaggagttcagatct
ggagccagtcgagtgttgatctccacagacgtctgggccagaggtctggatgtgcctcag
gtctctctcatcattaactacgatctccccaacaacagagagctgtacatccacaggatt
ggtcgatcgggtcgttacggcaggaaaggtgtggccatcaactttgtgaagaacgacgac
atccgtatcctgcgtgatattgagcagtactattccacacaggtcgatgagatgcccatg
aacgtggctgacctgatctga
DBGET
integrated database retrieval system
