Sinocyclocheilus anshuiensis: 107702880
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Entry
107702880 CDS
T04917
Name
(RefSeq) embryonic polyadenylate-binding protein-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03015
mRNA surveillance pathway
sanh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107702880
09123 Folding, sorting and degradation
03018 RNA degradation
107702880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanh03019
]
107702880
03041 Spliceosome [BR:
sanh03041
]
107702880
Messenger RNA biogenesis [BR:
sanh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107702880
mRNA cycle factors
Stress granule specific factors
107702880
Spliceosome [BR:
sanh03041
]
Complex C
Other components
Complex C specific factors
107702880
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_occluded
RBD_RDR6
PABC_AtC3H46
PRR18
Motif
Other DBs
NCBI-GeneID:
107702880
NCBI-ProteinID:
XP_016360806
UniProt:
A0A671S9W3
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MNSSGPAYPLASLYVGDLHPDVTEAMLYQKFSPAGQIMSIRVCRDVITRRSLGYAYINFQ
QPADAECALDTMNYEVIKGHPIRIMWSQRDPGLRKSGVGNIFIKNMDESIDNKALYDTFS
AFGNILSCKVVCDENGSKGYGFVHFETQEAANRAIETMNGMLLNDRKVFVGHFKSRKERE
AEFGAKAMEFTNVYIKNFGEDIDREKLKSIFSEFGKTLSVCVMTDERGRSRGFGFVNFEN
HGDARRAVTEMNGKELNGRVLYVGRAQKRLERQGELKRKFEQIKQERIQRYQGVNLYVKN
LDDGIDDEKLRKEFAPYGTITSAKVMTDGGHSRGFGFVCFSSPEEATKAVTEMNGRIVST
KPLYVALAQRKEERKAILTNQYMQRLASIRAIPSPAIPTTYQQSSGYYMTSVPQHQVRSF
YNTVPNLRPVPRWTAQAQRTQAPFTAQFVRQAVPRRPSTTISTVRQASTQVPHIINNTQR
MANIGTQTAGGRTAGAGAVVRGASQYKYSAGVRNVQQVISAPAPVIHQVVPNTEPAVHVR
GQEPLTASMLAAAPLKEQKQLLGERLYPLIQALHPTLAGKITGMLLEIDNSELLHMLESP
ESLHSKVEEAVAVLQAHQAKELSAK
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaatagcagtggaccagcatacccattagcctctctctatgtcggtgaccttcatcct
gatgtcactgaggccatgctgtaccagaagttttctcctgctggtcagatcatgtccatc
cgtgtgtgccgtgatgtcattacacggagatccctcggatatgcttacatcaacttccag
cagcctgctgatgcggaatgtgcccttgacaccatgaactatgaagtcatcaagggtcat
ccaatcaggatcatgtggtctcaacgagatccaggtctgagaaagtctggtgtgggaaac
attttcatcaagaacatggatgagtctattgacaacaaggctctctatgacaccttttct
gcctttggtaacatcttgtcatgtaaggtggtttgtgatgagaatggctcaaagggttat
gggtttgtgcactttgagacccaagaagcagccaacagagccattgagaccatgaacggc
atgcttctgaacgaccgcaaagtttttgtagggcattttaagtctcgtaaggagcgtgag
gcagagtttggagctaaagccatggagtttaccaatgtgtacattaagaacttcggtgaa
gatattgaccgtgagaaactgaagagcatcttctctgaatttggtaagacccttagcgtc
tgtgtaatgacagatgaaaggggacgctctcgtggctttggatttgtcaactttgaaaac
cacggagatgccaggagggcagtaactgaaatgaatggcaaagagctgaatggcagagtc
ctgtatgtgggcagagctcagaaaagactggagaggcagggagaactcaaacgcaagttt
gagcaaataaagcaggaacgcatacaacgctaccagggggttaatctctatgtaaaaaat
ctagatgacggcatcgatgatgagaaactaaggaaagagtttgcaccttatggaaccatc
actagtgcaaaggtgatgacagatggaggccacagtaggggctttggctttgtgtgtttt
tcctctcctgaagaggccacgaaggcagtgactgagatgaatggccgtatcgttagcact
aaaccactatacgtggctcttgcccagagaaaagaggagcgaaaggcaatcctcaccaat
cagtacatgcagagactagccagcattcgagccattcccagccctgccatacccaccacc
taccagcagagctccggctactacatgacctctgtgccgcaacatcaggttcgctctttt
tacaacaccgtaccaaacctgcggcctgtgccacgctggacagctcaagcacagaggact
caagctccatttacagctcagtttgtgagacaagcggtgccccgcaggccctctaccacc
atcagcacagtccgccaggcctccactcaggttcctcacattattaacaacacccagcga
atggccaacattggcacacagactgcaggtgggagaactgcaggagccggagctgtagtc
agaggagccagtcaatacaaatactcagcaggagtgcgaaatgtgcagcaggtcatcagt
gctccagctcctgtcatccaccaggtagtaccgaatacagagccggcggttcatgtgaga
ggccaggagccccttactgcctcaatgctggcagctgcacccttaaaagagcagaaacaa
ctcctgggtgagcggctgtatccacttatccaggccttgcatccgactcttgcgggaaag
attacaggcatgctgctggagattgacaactctgaactactgcacatgctcgagtctcca
gagtccctgcactccaaggttgaagaggctgtagcggtgcttcaggctcatcaagccaag
gaactgtcggcaaagtga
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