KEGG   Sinocyclocheilus anshuiensis: 107703828
Entry
107703828         CDS       T04917                                 
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
sanh  Sinocyclocheilus anshuiensis
Pathway
sanh03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:sanh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    107703828
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sanh03021]
    107703828
   03036 Chromosome and associated proteins [BR:sanh03036]
    107703828
Transcription machinery [BR:sanh03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     107703828
   Coactivators
    SAGA/TFTC/STAGA complex
     107703828
Chromosome and associated proteins [BR:sanh03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     107703828
    STAGA complex
     107703828
    TFTC complex
     107703828
    SAGA complex
     107703828
    SLIK complex
     107703828
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd WDR55 TFIID_NTD2 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_SCAP ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_Vps41 RMC1_N Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_IP5PC_F PROPPIN Beta-prop_WDR19_1st PEP5_VPS11_N WD40_like Nbas_N
Other DBs
NCBI-GeneID: 107703828
NCBI-ProteinID: XP_016362069
UniProt: A0A671Q9E4
LinkDB
Position
Unknown
AA seq 603 aa
MKRVRTEQIQYTVTQYLKRRQYIDTDGSLKGAKLSQSAEEMAASLTVQTESSCANVVSAA
PCQSVPQQYETQFSRLRSFLQEAEAPLVKEVSGVLFPLFLYLHLDMARCGLKGAVDSFYS
RFHSFFQQDPEQKAIVDLLRGVVTPQDVTSNPKLCSLLDHKYVVHLTDQAYNYLLRYLQS
DDNSAICWALSTHVQVEVTAARRTDYQLYGAGIGAGNTTSTSSSSAAWTAGDGSEGAERV
EVTAGLPQNEAALEALQDCIKRVREGAPSLTTVCFYAFQHTDQLLNTAEVSADSRLLAAG
FDNSAVKLWSLRARKLKAGPHRVDVSKIRLACDVLEEEADDEDASGSEIKTLRAHSGPVY
RTAFLTDGSGLLSCSEDSTVRFWDLNSFTNTVLYRGHTYPVWDVDVSPCSLYFSTASHDR
TARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYVATGSTDKTVRLWSTQQGASVRLFTG
HRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGSLFKDLRGHTDSITSLSFSQDSSLVA
SASMDNSVRVWDIRSAHGSAPTDGSSSELIGQYTGSTSNILNVQFMACNLLLVTGTALEK
QEQ
NT seq 1812 nt   +upstreamnt  +downstreamnt
atgaagcgggtgcggacggagcagatccagtatacggtgacccagtacctgaagaggagg
cagtatatagacacagatgggtctctgaagggggccaaactctcccagtctgctgaggag
atggcagccagtctgacggttcagacggagtccagctgtgcgaatgtggtgtccgcagcc
ccgtgtcagtcagtcccgcagcagtatgagacccagttctccagactgcgctccttcctg
caggaggcagaagcgccgttagtgaaggaggtgagcggcgtcttgtttccgctcttcctc
tacctgcacctggacatggcacggtgtggcctgaagggggcggtagactcgttttacagt
cgcttccactcgttcttccagcaggaccctgagcagaaagccatcgtagacctgctacga
ggagttgtcacacctcaggatgtgacctcaaaccctaaactctgctcgctcctggatcac
aagtatgtggtgcatctgacggatcaagcgtacaactacctgctgcgttacctgcagagc
gacgacaacagtgccatctgctgggcgctcagcacacatgtgcaggtggaggtgacagca
gcgcgccgaaccgactaccagctgtacggcgcaggcataggagcaggaaacactacctcc
acttcctcttcctctgctgcatggactgcgggggatgggtcggagggggcagagcgtgtg
gaggtcacagctgggttacctcagaacgaggcggcgctggaggcgttgcaggactgcata
aagcgcgtgcgagaaggtgcgccttcgctcaccaccgtctgcttctacgccttccagcac
acggatcagctgctgaacacggccgaggtgtcagcggacagccgcttgctggcggccggc
ttcgataactctgccgtgaagctgtggagtctgcgggccaggaagctgaaggcgggacct
cacagggtcgacgtgtctaaaataagactggcctgtgacgtgctggaggaggaggcagat
gatgaggatgcctcaggcagtgagataaagaccctgcgcgctcacagtggccccgtgtac
cgcacggcgttcctgacggacggctccggcctgctgtcctgttcagaggactccaccgtt
cgcttctgggacctgaacagcttcacgaacaccgtcctgtaccgcggccacacttacccc
gtctgggacgtggacgtcagtccctgcagcctgtacttctccactgcgtcccacgaccgc
accgcacgcctctggagcttcgcgcgcacctatccgctgcgtctgtacgccggacacctc
tccgatgtcgactgcgtcaaattccaccccaactccaactacgtggcgacaggctccacg
gataaaaccgtgcggctgtggagcacgcagcagggggcgtccgtgaggctgttcaccggg
caccgcgggcccgtgctgtcgctcgccttctcgcccaacggtaagtacctggcctcggcc
ggagaggaccagagactgaagctgtgggacctggcgtccggcagcctgttcaaagacctg
cggggtcacaccgacagcatcaccagcctctccttcagccaggacagcagtctggtggcc
tccgcctccatggacaactcggtgcgcgtgtgggacatacgcagcgcccacggcagcgcc
cccaccgacggctccagcagcgagctgattggacagtacacgggcagcactagcaacatc
ctcaatgtgcagttcatggcctgcaacctgctgctggtgacgggcactgcgctggagaaa
caggaacagtga

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