Sinocyclocheilus anshuiensis: 107704102
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Entry
107704102 CDS
T04917
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107704102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanh03019
]
107704102
Messenger RNA biogenesis [BR:
sanh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107704102
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
ARM_TT21_N
TPR_14
TPR_12
TPR_8
ARM_TT21
TPR_10
TPR_7
SCAF11-like_C
TPR_MalT
TetR_C_5
Motif
Other DBs
NCBI-GeneID:
107704102
NCBI-ProteinID:
XP_016362438
LinkDB
All DBs
Position
Unknown
AA seq
748 aa
AA seq
DB search
MAETGSDAGDMKHDSVSSPGISDQEKEMATNAFEAFKAGSHDESLKHLDSLQELNKEDYK
VTMNKAITEFYKSGQTTTSTLKQTLITLKNQMHTAVDDIDGLDDVENSILNYNQAVIHYH
MRQYSESISIGEKLYQFLEPFEEKFAQAVCFLLVDLYLLTFQPEKALHLLAVLEKLTVKD
GNSKNGKGESTYSTNKESSSLKAEFTAMIEAAKSKMHQYKVRAYIQMKSLKACKREIKSV
MNTSGNSAPSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGPLKTGECVRCMFWNNLGCI
HFAMGKHNLGLFYFKKALQENDHVCAQLGDGSNGQAAKKFTGIPMCALLANKRYELLYNC
GIQLLHIGRPLAAFECLMEAVQVYHSNPRLWLRLAECCITANKGSSEQETKGLPSKKGIV
QAVVGQGYHRKIVLASQSAQNTIYSEGQSAAIPVASMEFAAICLRNALLLLPEHQQHDSK
PDNGSKSCSQSGSTESSSETSDACSGKTQEGDKFIPAAPSSPLRKQEVENLRCSILACSA
YVALALGDNLMALNHAEKLLHQTKLSGSLKFLGHLYAAEALISLDRISDAIAHLNPENVT
DVSLGVSSSEQDQGSDKGDLEPVESSGKQTPLCYPSSVSSARATMLFNLGSAYCLRSEYE
KARKCLHQAASMVNTKEIPPEAILLGVYLELQNGNTQLALQIIKRNQLLPSVKPASSPDL
RKKPLPFQSSQPVQPIQTPSSFTQVQRK
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaacaggctcagatgctggtgacatgaaacatgacagtgtttcatctcctggg
atctccgatcaagagaaggagatggcaaccaatgcttttgaggcatttaaggctggaagc
catgacgagtccctgaaacaccttgacagccttcaggagcttaacaaagaggactacaag
gttacaatgaataaagcgatcactgagttttataaaagtgggcagacaacaactagcacc
ctgaagcagacgttaattaccttgaagaatcagatgcatacagctgtggacgatattgat
ggtttggatgatgtcgagaacagtattctcaactacaatcaagctgtgatccattaccac
atgcgacagtattcagaatctatatccatcggggagaagctctaccagtttcttgaacct
tttgaagaaaagtttgctcaggccgtttgtttcttgttggtggatctatacttgctcacc
ttccagccagagaaggcactgcacctgttggctgtgctggagaagctcactgtgaaggat
gggaacagcaaaaatggcaaaggagagagtacctacagcacaaataaggagtcttcttct
ctgaaagcagagttcacagctatgatcgaggcagctaaatcaaagatgcaccagtataaa
gtgcgagcctatatccagatgaagtcactgaaggcctgtaaacgggaaatcaaatctgtg
atgaacacatctggaaattctgcgccctcactcttcctgaagagtaattttgagtatttg
aggggaaattatcgtaaagctgtgaaactcctcaacagttcaaatatcgcagagcatcca
ggacccttgaaaacaggtgaatgcgtgaggtgtatgttctggaataatcttggttgtatc
cattttgccatggggaagcacaatctgggtcttttttactttaaaaaagcacttcaagaa
aatgaccacgtatgcgcccagcttggtgatggcagtaatgggcaggcagctaagaagttc
acaggcatccccatgtgtgctctgttagctaataagcgctatgaactgctgtataactgt
gggattcagttacttcatatcggccgaccactggcagcgtttgagtgtctgatggaggca
gtgcaggtgtatcactcaaaccctcgactctggctcagactcgcagaatgctgcatcaca
gctaataaagggagctcggagcaggaaacaaaaggtttacccagtaaaaaggggattgtg
caggctgttgttgggcaaggctaccatcgcaagattgttttagcatcacagtccgcacag
aacaccatctacagtgagggccagtcagcagcaatcccagtggccagtatggagtttgca
gcgatctgtctgcgtaacgctttgctcttgctcccagagcaccaacagcacgatagcaaa
cctgacaacggctccaagagctgcagtcagtcaggcagcacagaaagcagcagcgagacc
agtgatgcctgcagtgggaagactcaagagggagacaagttcattcctgctgccccctca
tcacccttgagaaagcaggaggtggagaatctcaggtgctcaattctagcctgcagtgca
tatgtggctcttgctcttggggacaacttaatggctcttaatcatgcagaaaagctcctg
catcagacaaagctttcaggatcgctcaagttcctgggtcacctatatgctgctgaagcc
ctgatctctttggacagaatctcggatgccattgcacatcttaacccggaaaacgttact
gatgtctcattaggtgtgtcctccagtgaacaagaccaaggttctgataaaggagatctg
gagcctgtggagtcctcagggaagcagacgcctttatgttaccctagctcagtaagttct
gcccgggccacaatgctcttcaacctgggcagtgcgtattgcttgaggagcgagtacgag
aaagcccgcaagtgcctccatcaggctgcttcaatggtgaacactaaggagattcctcca
gaagccattttactgggcgtctacttagaactgcagaacggaaacacacagctggcgcta
cagatcatcaaacggaaccagctcctcccgtctgtcaagcccgcctcctccccagacctc
cgtaagaaaccacttcccttccagtcatcccagcctgtacagcccatacagaccccctcc
tcctttacacaagtacagcgcaagtga
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