Sinocyclocheilus anshuiensis: 107704926
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Entry
107704926 CDS
T04917
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107704926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanh03019
]
107704926
Messenger RNA biogenesis [BR:
sanh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107704926
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107704926
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF4407
Motif
Other DBs
NCBI-GeneID:
107704926
NCBI-ProteinID:
XP_016363473
LinkDB
All DBs
Position
Unknown
AA seq
893 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWKKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEMEQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIEELKRLIERHRYHI
RMLETILRMLDNDSIQVEAIHKIKDDVEYYIDSSQDPDFEENEFLYDDLDLEELPATLMA
TSPQGHIEDEMFLQSSSTPTSTTSSSPIPPSPATGTMEISEDKRGRSTDSEVSQSPVKNG
NPSLSSFSSSASSGSSSSSSSLVSMATVIGGCTAVSGGSSLLGSFSSAVQQHAPQSQQQA
QVKLSSTSVPSNNTPSPPSHPTLPASTTSSLPSSSTPGPVTSNSQSQASSVPGVEGSRLG
LGLGKGGVTVTSSSSGAQMPGLGMAGMSGSLNTMAGLLSGSTPAPYAQAAAGGTAGSVAS
GPVGSGSVSSGISVPSAGAGGANTGATSNGAGTGAGIGLLGSSPGHDTLTGGILNLVPGQ
TALQASAQIPVSHVGTAPGGGTGESGLSGNGSSSVASAGVGTNVAPARPLSSLKQNGATS
YSAVVADNTPDSSLSSASQSQNSHSSSSSSSTNQTLDNGPSLLSSITLPPSSPSPAFTDS
TPGGGSLLNGPHSYTLNTEAIKTPEPPSSLKAMAERAALGLTLDGEISSLHLPDRAPPGP
TTAPQPAVSEVNLPPSLGACPLGPTPLTKEQLYQQAMQEAAWIHMPHPSDSERIRQYLMR
NPCPTPPFHHQVPPHHSDSIEFYQRLSTETLFFIFYYLEGTKAQYLSAKALKKQSWRFHT
KYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggctgataagaggaaactacaaggtgaaatagatcgatgtttgaaaaaagttgctgaa
ggtgttgaacagtttgaagacatttggaaaaagcttcacaatgcagccaatgccaaccag
aaggaaaaatatgaggctgatctcaagaaagagattaaaaagctccagcggctacgagac
cagattaagacatgggtggcatccaatgagatcaaagacaaacggcagctagtggagaac
aggaagcttattgaaacgcaaatggagcgatttaaggtggttgaaagagaaaccaagaca
aaggcctactctaaagaggggctgggcttggctcagaaagtagacccagcgcagaaagag
aaggaggaaatggaacagtggctcacgaacacaatagacactttgaacatgcaggtggac
cagtttgaaagtgaagttgagtccctctctgttcaaacacggaaaaagaaaggagacaag
gagaagcaggatcggattgaagaactaaagaggttaatcgaaagacaccggtaccacatt
cgtatgctagagaccatcttgaggatgttggataacgattcgatccaggttgaagcaatc
cataagatcaaagatgatgtggaatattacattgactcttcgcaagacccagattttgaa
gagaatgagttcctctacgatgatctggacttggaggaattaccggcaactttgatggcg
acgtctcctcagggccatattgaagatgagatgttccttcagtccagcagcacaccgacc
tccactacttcctcttctcccatccctccatctcctgccacaggcacaatggagatttcg
gaggataagagaggtcgatcgacagacagtgaagtcagtcagtctcccgtgaagaacggc
aacccatctctctcgtccttctcctcatccgcctcctcaggctcctcctcctcctcctct
tcgctggtttctatggctactgtcatcggtggctgcacagcggtctctgggggcagcagc
ctgctgggaagctttagcagcgcagtacagcagcatgctcctcagtctcaacagcaagca
caggtcaaactctcctcgacatccgttccctccaacaacacacctagtccacctagtcac
cccacgctacctgcctccactacttcctctctgcctagttccagcacacctggcccagtt
acttccaattcccagtcccaggcttcatctgttcctggggttgagggctctagactgggt
ttgggcctggggaaagggggcgtgacggtgaccagcagcagtagtggggctcagatgcca
ggtctgggcatggccggcatgtctggttctctcaacaccatggcagggcttctctcaggc
tctacccctgccccctatgcccaggcggctgcaggcggaacagcaggtagtgtcgccagt
ggtccggtggggagtggcagtgtaagttctggcatatctgtaccgagtgcaggtgcaggg
ggagcaaacacaggcgcgaccagtaatggtgcgggtacaggggctggtataggcttgctt
gggtccagtccgggtcacgataccctaacgggaggaattctaaacctggtaccagggcag
acggctctccaggcgtctgcacagatacctgtaagccatgtgggcaccgcacctggagga
ggaactggagagagcggattgagtggaaatggaagcagttctgtggcgagtgcaggagtg
ggaacgaacgtagcgcctgcaagaccccttagcagcctcaaacaaaatggagcaaccagt
tacagtgctgtggttgcggacaacacaccagactcctcactcagcagtgccagccaatca
caaaacagccattcctcatcctcgagttcatcaaccaatcaaactctggataatggcccc
agtttattgagttctatcactctacccccctcctccccatcacctgctttcactgacagc
acacctggtggtgggagtctactaaacggcccacactcctacacactcaacacagaagcc
atcaagactcctgaaccaccaagctctttgaaagctatggcagaacgggcggcactggga
ttgacactggatggagagatttcatcgctacacctcccagatcgagccccaccgggaccc
acaacggctcctcagcctgctgtttcagaggtcaacctgccgccatctttaggggcgtgt
cctttaggccccacccctctcactaaagagcagctttaccaacaggcaatgcaggaggca
gcatggatacacatgccccacccgtccgattcagagagaatcaggcagtacctgatgaga
aacccctgtcctacaccgccattccaccaccaggtgcccccccatcattcggactctatt
gagttctaccagagattgtccactgaaacgctcttcttcattttctactacctggagggc
acaaaggcacagtacctgtcggctaaagcactgaagaagcaatcgtggaggttccacacc
aaatacatgatgtggttccaacgacacgaggaacccaagaccatcactgatgagtttgaa
cagggcacgtacatttactttgactatgaaaagtggggccagagaaaaaaggaaggattt
acgtttgagtacagatacctggaggacagagacctgcagtga
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