Streptomyces anulatus: KZO11_01320
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Entry
KZO11_01320 CDS
T09280
Name
(GenBank) ATP-dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
sanl
Streptomyces anulatus
Pathway
sanl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sanl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
KZO11_01320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sanl03400
]
KZO11_01320
Enzymes [BR:
sanl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
KZO11_01320
DNA repair and recombination proteins [BR:
sanl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
KZO11_01320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_OB_2
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
QYA92435
LinkDB
All DBs
Position
complement(312549..313511)
Genome browser
AA seq
320 aa
AA seq
DB search
MARLPRIAPMLATPGRLPPPSEDTSYAYEVKQDGQRCMVYAPGDGSTELRSRSGADITPA
YPELASLGAVLGSRPAVLDGEIVALDDEGRSDFQRLQPRMGLAGSPVRAARMAAKAPVHL
MLFDVVFLDTSRLTRTPYSERRAVLESLDLCGPAWSVPAAVVGHGGRALEMTRTAGFEGL
VAKRRTSLYEPGARSRAWIKIRHVRTEDIVVGGWLPGHGRLASLPGALLMGRPAPGGGLR
YVGGVGTGWSDDERTTLAALLHAAATDICPFTERPAVAGARWVAPRLVGEVRYTTRTRAG
RLRQPSWHRLRPDLTPDDLH
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcgtctgccccgcatcgcgccgatgctcgcgacccccgggcggctgcccccgccc
tcggaggacacctcgtacgcgtacgaggtgaagcaggacgggcagcggtgcatggtctac
gctcccggcgacggatcgacggagctgcgctcccggtccggcgccgacatcacccccgcc
tatcccgagctcgcgagcctgggagcggtgctgggctcccgccccgccgtgctggacggg
gagatcgtcgcgctggacgacgaggggcgcagcgacttccagcggctgcagccccggatg
gggctggccggctccccggtcagggcggcccgcatggccgcgaaggcgcccgtgcacctg
atgctcttcgacgtcgtgttcctcgacacgagccggctcacccgcaccccgtactccgag
cgccgcgccgtcctggaatccctggacctgtgcgggcccgcgtggtcggttccggcggcg
gtcgtcgggcacggcgggcgggcgctggagatgacgcggaccgccggcttcgaaggcctc
gtggccaagcgacgcacctccctctacgagccgggcgcccgctcccgggcatggatcaag
atccggcacgtgcggaccgaggacatcgtcgtcggcggctggctgcccggccacggccgc
ctcgcctccctgcccggcgccctcctcatgggccgcccggcccccggcgggggactccgt
tacgtcggcggcgtgggcaccggctggagcgacgacgaacgcaccaccctcgcagccctc
ctccacgccgcggcgaccgacatctgtccgttcaccgagcggcccgcggtggccggcgcc
cggtgggtggcgccccggctggtcggagaggtccgctacacgacccgcaccagggccgga
cgcctgcgccagccctcctggcaccgcctgcggcccgacctcacacccgatgacctccac
tga
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