Streptomyces anulatus: KZO11_07395
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Entry
KZO11_07395 CDS
T09280
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
sanl
Streptomyces anulatus
Brite
KEGG Orthology (KO) [BR:
sanl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanl03019
]
KZO11_07395 (hrpB)
Enzymes [BR:
sanl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KZO11_07395 (hrpB)
Messenger RNA biogenesis [BR:
sanl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KZO11_07395 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
AAA_19
AAA_22
AAA_30
AAA_25
ResIII
HA2_N
AAA_11
NTPase_1
nSTAND3
Helicase_RecD
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QYA93543
LinkDB
All DBs
Position
1693195..1695702
Genome browser
AA seq
835 aa
AA seq
DB search
MIRTEALDRLPVRTAVPALRRALDDRGVAVLCAPPGTGKTTLVPLVLAGLTGEGPVRRVV
VAEPRRIAARAAARRMAWLLGEQPGGRIGFTVRGERVVGRDTVVEVVTTGVLLQRLQRDQ
ELAGVDVVIIDECHERHLDADTVAAFLLDVREAIRPDLRLVAASATTDAEGWARLLGDAP
VVEAEGVSYPVEVLWAPPARPVKPPHGMRVDPALLTHVAATVRRALGEREGDVLCFLPGV
GEIGRVAGQLAGVDAEVLQVHGRAPAAVQDAVLAGSSGGRRVVLATSVAESSLTVPGVRV
VVDSGLAREPRTDHARGLSALTTVRASQAAGRQRAGRAGREAPGAVYRCWDQAEDGRLAR
FPSPEIKVADLAAFALQAACWGDPDASSLALLDPPPAGAMGAAREVLEAIGAVDGGGQVT
ERGVRMSRLGLHPRLARALLDGAREAGARRAAEVVALLSEEPPREYGDDLAAALRTARRG
QDGYAARWKQEVRRLSSSLGSGSPGTGKGGSDDAAVGLVAALAFPERVARARGDGAFLMA
SGTGAELRDASRLRSAPWLAVAVADRPSHAASARVRLAALIDESTALLAAGHLRVRGEEV
RWVDGEVVARAVDRLGAVELAVRPLKQPDPELVRGALVEGLRREGLGLLRWTRDSEQFRL
RLAFLYRVLGAPWPDVSDEALLAETGAWLEPELSRARRRADLGRIDAGQALRRLLPWATG
EAVRLDELAPERIEVPSGSRIRVEYGGEQPVLAVKLQELFGLAETPRVAGVPVLVHLLSP
AGRPAAVTADLASFWRDGYKAVRAELRGRYPKHPWPEDPATVPATRFTSARLKRS
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
gtgatccgcaccgaagccctggaccgcctgcccgtccgcaccgccgtgcccgccctgcgg
cgcgcgctcgacgaccggggcgtcgccgtcctgtgcgccccgcccggcaccgggaagacg
acgctcgtcccgctggtgctggccgggctgaccggtgagggcccggtgcgccgggtcgtg
gtcgccgagccgcgccggatcgccgcccgggcggccgcgcggcggatggcctggctgctg
ggcgagcagccgggcggccggatcggcttcacggtgcgcggggagcgcgtggtggggcgg
gacacggtggtggaggtcgtgaccaccggggtactgctccagcggctccagcgggaccag
gagctggccggggtggacgtggtgatcatcgacgagtgccacgagcggcacctggacgcc
gacacggtcgccgcgttcctcctggacgtacgggaggcgatccggcccgatctgcggctg
gtggcggcgtccgcgacgacggacgcggagggctgggcgcggctgctcggcgacgccccg
gtggtcgaggccgagggcgtctcgtatccggtggaggtcctctgggcgccgcccgcccgt
ccggtgaagccgccgcacgggatgagggtggaccccgccctgctgacgcatgtggcggcg
accgtgcggcgggcgctcggtgagcgggagggggatgtgctctgcttcctgcccggcgtc
ggggagatcgggcgggtggccgggcagctcgcgggggtggacgcggaggtgctccaggtg
cacgggcgggctccggccgccgtgcaggacgcggtgctggccgggtcctccggggggcgg
cgggtggtcctggcgacctcggtggcggagtcgtcgctgacggtgccgggggtgcgggtc
gtcgtcgactcgggtctcgcgcgggagccccgtaccgaccacgcccgggggctgagcgcc
ctgacgaccgtccgggcctcccaggccgccgggcggcagcgcgccgggcgggcggggcgg
gaggcgccgggggcggtgtaccggtgctgggaccaggccgaggacgggcggctcgcgcgc
ttcccctcgcccgagatcaaggtcgccgacctcgccgccttcgcgctccaggcggcgtgc
tggggcgatccggacgcctcctctctcgcgctgctggacccgccgcccgccggggcgatg
ggcgccgcccgggaggtgctggaggcgatcggcgcggtggacggcgggggccaggtcacc
gagcgcggcgtgcggatgtcccggctcgggctgcatccccggctcgcgcgggccctgctg
gacggcgcccgggaggccggggcgcggcgggccgcggaggtggtggcgctgctgagcgag
gagccgccgagggagtacggggacgatctcgcggcggcgctgcggaccgcccgccggggc
caggacggatacgcggcgcgctggaagcaggaggtgcgccggctgtcgtcgtcgctgggc
agcggctcgcccggtaccgggaagggcggctcggacgacgccgccgtcggcctcgtcgcc
gcgctggcgtttccggagcgggtggcgcgggcccggggcgacggggccttcctgatggcg
tcgggcacgggcgcggagctgcgggacgcctcgcggctgcgcagcgcgccctggctggcc
gtggcggtagcggaccggccctcccacgcggcgtcggcgcgggtgcggctggcggccctg
atcgacgagtccaccgcactgctggccgccgggcatctgcgggtgcggggcgaggaggtc
cgctgggtggacggcgaggtggtggccagggccgtggaccggctgggggcggtggagctg
gcggtgcggccgctgaagcagcccgacccggaactggtgcgcggggccctggtggagggg
ctgcggcgggaagggctcgggctgctgcggtggacccgggacagtgagcagttccggctg
cggctggcgttcctgtaccgggtgctgggcgcgccgtggccggacgtctcggacgaggcg
ctgctcgcggagaccggggcgtggctggagccggagctgtcgcgggcacggcggcgtgcc
gacctgggccggatcgacgcgggccaggcgttgcggcggctgctgccgtgggcgacgggc
gaggccgtccggctggacgagctggcgccggagcggatcgaggtgccgagcggctcgcgg
atccgggtggagtacggcggggagcagcccgtactggccgtgaagctccaggagttgttc
gggctggccgagacgccccgggtggccggggtgccggtcctggtgcatctgctctccccc
gccgggcggcccgcggccgtcaccgccgacctggcgtcgttctggcgggacggctacaag
gcggtgcgggcggagctgcgcggccgctacccgaagcatccgtggccggaggaccccgcg
accgtaccggcgacgcggttcacctcggccaggctcaagcgctcgtag
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