Streptomyces anulatus: KZO11_15015
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Entry
KZO11_15015 CDS
T09280
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
sanl
Streptomyces anulatus
Brite
KEGG Orthology (KO) [BR:
sanl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sanl03016
]
KZO11_15015
Enzymes [BR:
sanl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
KZO11_15015
Transfer RNA biogenesis [BR:
sanl03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
KZO11_15015
Prokaryotic type
tRNA splicing ligases
KZO11_15015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
QYA94899
LinkDB
All DBs
Position
complement(3425621..3426814)
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AA seq
397 aa
AA seq
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MSYVEVPGAKVPIRMWADPASVEDVAMQQLRNVSTLPWIKGLAVMPDVHFGKGATVGSVI
AMQGAVCPAAVGVDIGCGMSAVKTSLTANDLPGDLSRLRSKIEQAIPVGRGMHGDAVDPG
KLHGFPTSGWDDFWGRFGGIADAVKFRQERATKQMGTLGSGNHFIEFCLDETGSVWLMLH
SGSRNIGKELADFHIGQAQKLPHNQGLIDRDLAVFIADTPQMAAYRNDLFWAQEYAKFNR
AIMMGLFQDVVRKEFKKARVTFDPVISCHHNYVAEERYEGMDLLVTRKGAIRAGSGDYGI
IPGSMGTGSYIVKGLGNEKSFNSASHGAGRRMSRNAAKKRFSTKDLEEQTQGVECRKDSG
VVDEIPGAYKPIEQVIDQQRDLVQVVAKLKQVVCVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacgtagaggtgccgggagcgaaggttcccatcaggatgtgggcggaccccgcg
tcggtcgaggacgtggcgatgcagcagttgcgcaacgtctccacgctgccgtggatcaag
ggcctcgccgtcatgccggacgtccacttcggcaagggggcaacggtcgggtcggtgatc
gcgatgcagggcgcggtgtgcccggccgcggtcggggtggacatcggctgcgggatgtcc
gcggtcaagacgtccctcaccgcgaacgatcttcccggcgacctgtcgcggctgcgctcc
aagatcgagcaggccattccggtcggccgggggatgcacggcgacgcggtggacccgggg
aagctgcacgggttcccgacgtcgggatgggacgacttctgggggcggttcggggggatc
gccgacgcggtcaaattccgtcaggaacgtgccacgaagcagatgggaacgctcggatcg
ggaaatcactttatcgagttctgtctcgatgagaccggttctgtctggttgatgctgcac
tccggttcgcggaacatcggcaaggagctggccgacttccatatcggccaggcacagaag
ctgccgcacaaccagggcctgatcgaccgcgacctggcggtcttcatcgcggacaccccg
cagatggccgcgtaccgcaacgacctcttctgggcgcaggagtacgcgaagttcaaccgg
gcgatcatgatggggctcttccaggacgtggtccgcaaggagttcaagaaggcccgggtg
accttcgatccggtcatctcctgccaccacaactacgtggcggaggagcggtacgagggc
atggacctgctggtcacccgcaagggcgcgatccgggcggggtccggcgactacgggatc
atcccggggtccatgggcaccggctcgtacatcgtgaagggcctcggcaacgagaagtcg
ttcaactcggcctcgcacggcgcgggccgccggatgagccggaacgcggcgaagaagcgc
ttctcgaccaaggacctggaggagcagacgcagggcgtggagtgccgtaaggactccggt
gtcgtggacgagatcccgggcgcgtacaagccgatcgagcaggtcatcgatcagcagcgg
gacctggtccaggtcgtcgcgaagctcaagcaggtggtgtgcgtgaagggctga
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