Streptomyces anulatus: KZO11_16600
Help
Entry
KZO11_16600 CDS
T09280
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
sanl
Streptomyces anulatus
Brite
KEGG Orthology (KO) [BR:
sanl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanl03019
]
KZO11_16600 (hrpA)
Enzymes [BR:
sanl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KZO11_16600 (hrpA)
Messenger RNA biogenesis [BR:
sanl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KZO11_16600 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_19
AAA_22
nSTAND3
T2SSE
NACHT
PhoH
DUF6139
AAA_16
NTPase_1
TsaE
SRP54
Motif
Other DBs
NCBI-ProteinID:
QYA95169
LinkDB
All DBs
Position
3766552..3770484
Genome browser
AA seq
1310 aa
AA seq
DB search
MSTSFADLQSQLGQLSLRDANRLGRRLEGARRIRKPEARQSVLDEIAADAGKAAERLAAR
AARLPALSYPDELPVSQKKDEILEAIRDHQVVIVAGETGSGKTTQIPKICMELGRGVRGM
IGHTQPRRIAARTVAERVADELKTPLGETVGWKVRFTDQVNPESTYLKLMTDGILLAEIQ
TDRELLAYDTIIIDEAHERSLNIDFLLGYLARLLPKRPDLKVVITSATIDPERFARHFGE
APVVEVSGRTYPVEVRYRPLLEDDSEDSDRDQITAICDAVDELGHEAPGDVLVFLSGERE
IRDTADALNKRNLRHTEVLPLYARLSHAEQHRVFQRHTGRRIVLATNVAETSLTVPGIKY
VIDPGNARISRYSHRTKVQRLPIERISQASANQRKGRCGRTSDGICIRLYSEDDFVTRPE
FTDPEILRTNLASVILQMTAAGLGDIEKFPFIDPPDHRNIRDGVQLLQELGALDPGEKDP
KKRLTPLGRKLSQLPVDPRLARMVIEADKNGCAREVMVIAAALSIQDPRERPAEKQTQAD
QNHARFKDETSDFLAYLNLWAYVREQQKERGSSSFRRMCKQEYLNFLRIREWQDIYAQLR
TVAKQMGITVEEPKAEASIPEQAVHTSLLAGLLSHIGLKDTEKNEYVGARSAKFAIFPGS
ALFKKQPRFVMSAELVETSRLWARVNAKVEPEWIEPLAGHLLKRTYSEPHWEKDQAAVMA
FERVTLYGVPIVAQRKVNFGRIDQEASRDLFIRNALVEGDWRTHHQFFHDNRKLLGEVEE
LEHRARRRDILVDDETLFDFYDQRIPEHVVSGAHFDSWWKNKKREEPDALDFERSMLINE
KAGAVTKDDYPDSWRQGKLKFKVTYQFEPGADADGVTVHVPLQVLNQVTSEGFDWQIPGL
REEVVTELIRSLPKPIRRHYVPAPNYADKFLDRAVPLQEPLPLTLARELQRMVGVPVTAD
DFDLSRVPDHLKITFRIVDERRRKVAEDKDLEALKLQLRPKARQALSKAAAATAGPSGES
IERSGLTDWTIGTLNKVFETRRAGQPVKAYPALVDQGDTVAVRLFDTEAEQQQAMWRGTR
RLIMLNIPVHPAKFASDRLSNQQKLALSRNPHGSVQALFEDCATAAADRLIAAHGGPAWD
EKAFRTLYDKVRADLVDLTVRTIDQVQQILAAWQACERRLKSTNSLTLVANVTDVREQLA
RLVPPGFVTATGLRRLPDLMRYLVAADRRLQQMPTAVQRDTTRMAKVHEMQDEYAWLLEQ
LPQGRPVPQEVLDVRWMIEELRVSYFAHALGTAFPVSDKRIVKAIDALAP
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atgtctacttccttcgccgatctccagtcccagctcggacagctctcgctccgtgacgcg
aaccggctcggccggcgcctcgaaggagcgcgccgcatccgcaagcccgaggcccgccag
tccgtgctggacgagatcgcggccgacgcgggcaaggcggccgaacggctcgcggcgcgc
gcggcccggctgccggccctgtcgtacccggacgagctgcccgtcagccagaagaaggac
gagatcctggaggcgatacgcgaccaccaggtcgtgatcgtcgccggggagaccgggtcc
ggcaagaccacgcagatccccaagatctgtatggagctgggtcgcggcgtccggggcatg
atcgggcacacccagccccggcggatcgccgcccgtacggtcgcggagcgggtcgcggac
gagctgaagacgccgctgggcgagacggtcggctggaaggtccgcttcaccgaccaggtg
aacccggagtcgacgtatctgaagctgatgacggacggcatcctgctcgccgagatccag
acggaccgcgagctgctggcgtacgacacgatcatcatcgacgaggcccacgagcggtcc
ctgaacatcgacttcctgctcggctatctggcccggctgctgcccaagcgcccggatctg
aaggtcgtcatcacctcggcgaccatcgacccggagcggttcgcgcgccacttcggcgag
gcgccggtcgtggaggtcagcgggcggacgtatccggtggaggtccgttaccgccccctc
ctggaggacgacagcgaggactccgaccgcgaccagatcaccgcgatctgcgacgccgtg
gacgagctgggccacgaggcccccggtgacgtcctcgtcttcctctccggtgagcgcgag
atccgggacacggcggacgcgctgaacaagcggaacctcaggcataccgaggtgctcccg
ctctacgcacgcctctcgcacgccgagcagcaccgcgtcttccagcgccacacgggccgc
cgcatcgtgctggcgaccaatgtggccgaaacctcgctgacggttcccggcatcaagtac
gtgatcgacccgggcaacgcccgtatctcccgctacagccaccgcaccaaggtccagcgg
ctgccgatcgagcggatctcccaggccagcgccaaccagcgcaagggccgctgcggccgt
acgtcggacggcatctgcatccggctgtactccgaggacgacttcgtcacccggccggag
ttcaccgacccggagatcctgcggaccaacctggcctccgtcatcctccagatgaccgcc
gccgggctcggcgacatcgagaagttccccttcatcgacccgccggaccaccgcaacatc
cgcgacggcgtgcagctcctccaggagctgggggcgctcgatccgggcgagaaggatccg
aagaagcgtctgacgcccctcggccgcaagctctcccagctgcccgtcgacccgcgcctg
gcccgcatggtcatcgaggccgacaagaacggctgcgcccgcgaggtcatggtcatcgcc
gccgcgctctccatccaggacccgcgcgagcggcccgcggagaagcagacccaggccgac
cagaaccacgcccggttcaaggacgagacgtccgacttcctggcgtatctgaacctctgg
gcctacgtccgggagcagcagaaggagcgcggctcgtcctcgttccgccggatgtgcaag
caggagtatctgaacttcctgcgcatccgcgaatggcaggacatctacgcgcagctgcgt
acggtcgccaagcagatgggcatcaccgtcgaggagcccaaggcggaggcgtccatcccc
gagcaggcggtgcacacctcgctgctggccgggctgctgtcgcacatcgggctgaaggac
acggagaagaacgagtacgtgggcgcgcgcagcgccaagttcgcgatcttccccgggtcg
gcgctgttcaagaagcagccccggttcgtgatgtcggcggagctggtggagacctcccgg
ctgtgggcacgggtcaacgccaaggtcgagcccgaatggatcgagcccctcgccgggcat
ctgctgaagcgcacgtacagcgagccgcactgggagaaggaccaggccgcggtgatggcg
ttcgaacgggtcaccctctatggggtgccgatcgtcgctcagcgcaaggtcaatttcggt
cgtatcgaccaggaggcctcgcgggatctgttcatccgcaacgccctggtcgagggcgac
tggcgcacccaccaccagttcttccacgacaatcgcaaactcctcggcgaggtcgaggag
ttggagcaccgcgcccgccgccgcgacatcctcgtggacgacgagacgctgttcgacttc
tacgaccagcggattcccgagcacgtcgtgtccggggcgcacttcgactcctggtggaag
aacaagaagcgcgaggagccggacgcgctcgacttcgagcgctccatgctcatcaacgag
aaggccggggccgtcaccaaggacgactacccggactcctggcggcagggaaagctcaag
ttcaaggtgacgtaccagttcgagcccggcgcggacgcggacggcgtgaccgtccacgta
ccgctccaggtgctcaaccaggtcacgtccgagggcttcgactggcagatcccggggctg
cgcgaggaggtcgtcaccgagctgatccgctcgctgccgaagccgatccgccggcactac
gtccccgcgccgaactacgccgacaagttcctcgaccgggcggtcccgctccaggagccg
ctgccgctcaccctggcgcgggagctccagcggatggtcggcgtgccggtcacggccgac
gacttcgacctctcccgggtcccggaccacctgaagatcacgttccggatcgtcgacgag
cgacggcggaaggtcgccgaggacaaggacctggaggcgctgaagctccagctgcggccg
aaggcccggcaggcgctctccaaggcggccgcggcgaccgcggggccgtccggcgagtcc
atcgagcggtccggtctcaccgactggacgatcggcacgctgaacaaggtcttcgagacg
cgtcgtgccgggcagccggtcaaggcctatccggccctcgtcgaccagggcgacaccgtg
gccgtacgcctcttcgacaccgaggccgagcagcagcaggcgatgtggcgcggcacccgc
cggctgatcatgctgaacatcccggtgcacccggcgaagttcgcctcggaccggctgagc
aaccagcagaagctggccctgtcccgtaatccgcacggctcggtccaggcgctcttcgag
gactgcgccaccgccgcggccgaccggctgatcgccgcgcacggcggaccggcgtgggac
gagaaggcgttccggacgctgtacgacaaggtgcgcgccgatctggtggacctgaccgtc
cgcacgatcgaccaggtgcagcagatcctggccgcgtggcaggcctgcgagcgccggctg
aagtcgacgaacagcctgacgctggtggccaacgtcaccgatgtgcgcgagcagctggcc
cgtctcgtaccgcccggtttcgttacggccaccggactgcgccggcttccggacctgatg
cgctatctcgtggcggccgaccggcggctccagcagatgcccacggccgtgcagcgggac
accacgcggatggcgaaggtccacgagatgcaggacgagtacgcctggctgctcgaacag
cttccgcagggccggccggtgccgcaggaggtgctggacgtccgctggatgatcgaggag
ctgcgggtcagctatttcgcccacgcgctgggcaccgcgttccccgtctcggacaagcgg
atcgtgaaggcgatcgacgccctcgcgccctga
DBGET
integrated database retrieval system
