Streptomyces anulatus: KZO11_26125
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Entry
KZO11_26125 CDS
T09280
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sanl
Streptomyces anulatus
Pathway
sanl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sanl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KZO11_26125 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sanl03021
]
KZO11_26125 (rho)
03019 Messenger RNA biogenesis [BR:
sanl03019
]
KZO11_26125 (rho)
Transcription machinery [BR:
sanl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
KZO11_26125 (rho)
Messenger RNA biogenesis [BR:
sanl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KZO11_26125 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA
AAA_25
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QYA96851
LinkDB
All DBs
Position
5901587..5903644
Genome browser
AA seq
685 aa
AA seq
DB search
MSDTTDLMGVTADKSVDSAAPAEGAATGTTARRRRSGTGLDGMVLAELQQVASGLGIRGT
ARMRKSQLIEVIKEAQAGGGSAAPKASSKSAEAPAEAETKPKRRATSKARTGDEAAAAAA
EKDTAQQQIDIPGQPASDDQPAGERRRRRATAQAGSPDTKTEAKTEVKAKAEPQAEQKTE
ERGEPKGDAKAEAAADTAEGRRGDRQGRGERGDRGERGERRERQRDRRGKGDDQGQQGGG
GQRPQRQGQGQSQGQGQGQQNRDNGPQDDFDDEAGGRRGRRGRYRDRRGRRGRDDFASDV
QVADDDVLIPVAGILDILDNYAFIRTSGYLPGPNDVYVSLAQVRKNGLRKGDHVTGAVRQ
PKDGERREKFNALVRLDSVNGMAPESGRGRPEFQKLTPLYPQDRLRLETDSNILTTRIID
LVAPIGKGQRGLIVAPPKTGKTMILQAIANAITVNSPECHLMVVLVDERPEEVTDMQRSV
KGEVISSTFDRPAEDHTTVAELAIERAKRLVELGHDVVVLLDSITRLGRAYNLAAPASGR
ILSGGVDSTALYPPKRFFGAARNIEDGGSLTILATALVETGSRMDEVIFEEFKGTGNMEL
KLDRKLSDKRIFPAVDVDASSTRKEEILLGTDELAVVWKLRRVLHALDQQQAIELLLDRM
KKTQSNAEFLLQIQKTTPGSGNGND
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacaccaccgatctgatgggcgtgactgccgacaagagcgtcgacagcgccgcg
cccgccgaaggtgctgccactggcaccaccgcacggcgccgccgctccggcaccggcctc
gatggcatggtcctggccgagctgcagcaggtcgcgtccggcctcggcatcaggggcact
gcgcggatgcgcaagagccagctgatcgaggtcatcaaggaggcgcaggcgggtggcgga
tccgccgcccccaaggcctcctccaagtccgcagaggcccccgccgaggcggagaccaag
ccgaagcgccgcgcgacctcgaaggcgcgcaccggggacgaggcagccgctgccgccgcc
gagaaggacacggcccagcagcagatcgacatccccggtcagccggccagcgacgaccag
cccgcgggcgagcgtcgtcgtcgccgtgcgaccgcgcaggcgggcagcccggacaccaag
accgaggcgaagaccgaggtcaaggccaaggcggagccccaggccgagcagaagaccgag
gagcggggcgagccgaagggcgacgccaaggccgaggccgccgccgacacggccgagggc
cgtcgcggagaccgtcagggccgcggtgagcggggcgaccggggtgagcgcggcgagcgc
cgcgagcgtcagcgcgaccgccggggcaagggcgacgaccagggccagcagggcggcggc
gggcagcgcccgcagcgccaggggcagggtcagagccagggccagggccagggccagcag
aaccgcgacaacggtccgcaggacgacttcgacgacgaggcgggcggccgtcgtggccgt
cgcggccgctaccgcgaccgccgcggccgtcgcgggcgcgacgacttcgcgagcgatgtg
caggtggccgacgacgacgtcctgatccccgtcgcgggcatcctggacatcctcgacaac
tacgcgttcatccggacctccggctacctgccgggcccgaacgacgtgtacgtctcgctc
gcccaggtccgtaagaacggcctgcgcaagggtgaccacgtcaccggtgcggtgcgccag
cccaaggacggcgagcggcgcgagaagttcaacgcgctggtccgcctcgactcggtcaac
ggcatggccccggagtcgggccgcggccgccccgagttccagaagctgaccccgctctac
ccgcaggaccggctccgtctggagaccgactccaacatcctgacgacgcggatcatcgac
ctggtggccccgatcggcaagggtcagcgcgggctcatcgtggccccgccgaagaccggc
aagaccatgatcctgcaggccatcgccaacgcgatcacggtcaacagccccgagtgccac
ctgatggtcgtcctggtcgacgagcgtccggaagaggtcaccgacatgcagcggtcggtg
aagggcgaggtcatctcctcgaccttcgaccgtcccgccgaggaccacaccaccgtcgcc
gagctggccatcgagcgcgccaagcgcctcgtcgagctgggtcacgacgtggtcgtcctg
ctcgactcgatcacccgcctgggccgcgcgtacaacctcgcggcgccggcctccggccgc
atcctgtccggtggtgtcgactcgaccgcgctgtacccgccgaagcgcttcttcggtgcc
gcgcgcaacatcgaggacggcggctcgctgaccatcctggccaccgcgctcgtcgagacc
ggctcgcgcatggacgaggtgatcttcgaggagttcaagggcaccggcaacatggagctc
aagctcgaccggaagctctcggacaagcgcatcttcccggcggtggacgtcgacgcgtcc
tccacccgtaaggaagagatcctgctcggcaccgacgagctggcggtcgtctggaagctg
cgccgggtgctgcacgcgctcgaccagcagcaggcgatcgagctcctcctggaccggatg
aagaagacccagtccaacgcggagttcctgctccagatccagaagacgacgccgggcagc
ggaaacggcaacgactga
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