Streptomyces antimycoticus: QR300_12660
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Entry
QR300_12660 CDS
T09335
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
sant
Streptomyces antimycoticus
Pathway
sant02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sant00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QR300_12660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sant03021
]
QR300_12660
Transcription machinery [BR:
sant03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QR300_12660
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
Sigma70_r1_1
Motif
Other DBs
NCBI-ProteinID:
WJD96764
LinkDB
All DBs
Position
complement(2994581..2996149)
Genome browser
AA seq
522 aa
AA seq
DB search
MSASTSRTLPPEIAESESVMALIERGKAEGQIAGDDVRRAFEADQIPPTQWKNVLRSLNQ
ILDEEGVTLMVSAAEAPKRTRKSVAAKSPAKRTATKTVAAKTVTAKKAPAASAIPSADAG
DIPADEAGVGPAKKAAAKKATAKKTVAKKTTAAAKKTVAKKTAKKDVTDELLEADEVIEE
AAAPGKPGPEGAEAEPENAGFVLSDEDEDDAPAQQVAAAGATADPVKDYLKQIGKVPLLN
AEQEVELAKRIEAGLFAEDKLANSDKLAPKLKRELEIIAEDGRRAKNHLLEANLRLVVSL
AKRYTGRGMLFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTI
RIPVHMVEVINKLARVQRQMLQDLGREPTPEELAKELDMTPEKVIEVQKYGREPISLHTP
LGEDGDSEFGDLIEDSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVSMRFGLTDGQP
KTLDEIGKVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggccagcacatcccgtacgctcccgccggagatcgccgagtcggagtctgtcatg
gcgctcatcgagcggggaaaggctgaggggcagatcgcaggcgacgatgtgcgccgggcc
ttcgaggctgaccagattccgccaacccagtggaagaacgtactgcgcagcctcaaccag
atcctcgacgaggagggtgtgacgctgatggtcagtgccgcagaagcgcccaagcgcacc
cgcaagagcgtcgcagcgaagagcccggcgaagcgcaccgccaccaagactgtcgcggcc
aagacggtcaccgccaagaaggcccccgccgcctcggcgattccatcggcggacgccggc
gatatcccggcagatgaggccggggtgggccccgcgaagaaggccgccgccaagaaggcc
acggccaagaagacggtcgcgaagaagaccaccgccgccgccaagaagacggtcgcgaag
aagaccgccaagaaggacgtcaccgacgagcttctcgaggccgacgaggtcatcgaggag
gcagccgcaccgggcaagcccggtcccgagggcgccgaggccgagcccgagaacgcgggc
ttcgtgctctccgacgaggacgaggacgacgcccccgcgcagcaggtcgccgcggccggt
gccacggccgacccggtcaaggactacctcaagcagatcggcaaggtcccgctgctcaac
gccgagcaggaggtcgagctcgccaagcgcatcgaggccggtctgttcgccgaggacaag
cttgccaactcggacaagctggcccccaagctcaagcgtgagctggagatcatcgccgag
gacggccgccgcgccaagaaccacctcctggaggccaacctccgtctggtggtttccctg
gccaagcgctacacgggccgcggcatgctcttcctggacctcatccaggagggcaacctc
ggtctgattcgcgccgtcgagaagttcgactacaccaagggctacaagttctccacgtat
gccacctggtggatccgtcaggcgatcacccgcgccatggccgaccaggcccgcaccatc
cgtatcccggtgcacatggtcgaggtcatcaacaagctggcgcgtgtccagcgccagatg
ctccaggatctgggccgtgagcccaccccggaggagctggccaaggagctcgacatgacc
cccgagaaggtcatcgaggtccagaagtacggccgtgagccgatctcgctgcacaccccg
ctgggcgaggacggcgacagcgagttcggtgacctcatcgaggactccgaggcggtcgtc
ccggccgacgcggtcagcttcaccctgctgcaggagcagctgcactccgtgctcgacacg
ctcagcgagcgtgaggcgggcgtggtctcgatgcgcttcggcctcaccgacggtcagccg
aagaccctcgacgagatcggcaaggtctacggcgtgacgcgtgagcgcatccgtcagatc
gagtccaagacgatgtcgaagctgcgccacccgtcccgctcccaggtcctccgcgactac
ctggactga
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