Streptomyces antimycoticus: QR300_18865
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Entry
QR300_18865 CDS
T09335
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sant
Streptomyces antimycoticus
Pathway
sant03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sant00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QR300_18865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sant03021
]
QR300_18865
03400 DNA repair and recombination proteins [BR:
sant03400
]
QR300_18865
Enzymes [BR:
sant01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QR300_18865
Transcription machinery [BR:
sant03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QR300_18865
DNA repair and recombination proteins [BR:
sant03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QR300_18865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
WJD97893
LinkDB
All DBs
Position
complement(4398760..4399782)
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQVGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNVDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgctcagcgtccctcgttgaccgaagaggtcgtcgacgagttccgctcccgg
ttcgtgatcgagccgctggagccgggcttcggctacaccctcggaaactccctgcgtcgt
acgctcctctcctcgatccccggtgcggccgtcaccagcatccggatcgacggggtcctg
cacgagttcaccaccgtgccgggcgtcaaggaggacgtcaccgacctgatcctcaacatc
aagcagctggtcgtctcctcggagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggcccgggtctggtcaccgccgccgacatcgccccgccggccggtgtcgaggtgcacaac
cccgacctggtcctggccacgctgaacggcaagggcaagctggagatggagctcacggtc
gagcgtggccgcggttacgtctccgccgtgcagaacaagcaggtcggccaggagatcggc
cggatcccggtcgactcgatctactcgccggtgctcaaggtcacctacaaggtcgaggcg
acccgtgtcgagcagcgcaccgacttcgacaagctgatcgtcgacgtcgagaccaagcag
gccatgcggccgcgtgacgccatggcgtcggccggtaagaccctggtcgagctgttcggc
ctggcccgcgagctgaacgtggacgccgagggcatcgacatgggcccgtccccgacggac
gccgccctggccgccgatctggcgctgccgatcgaggagctcgagctcaccgtccgctcg
tacaactgcctcaagcgcgagggcatccactccgtgggtgagctcgtggcgcggtccgag
gcggacctgctcgacatccgcaacttcggcgccaagtcgatcgacgaggtcaaggcgaag
ctggcgggtatgggcctggcgctcaaggacagcccgcccggattcgacccgaccgccgcc
gctgacgccttcggcgccgacgacgacgcggatgccggtttcgtggagaccgagcagtac
tga
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