Streptomyces antimycoticus: QR300_19065
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Entry
QR300_19065 CDS
T09335
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sant
Streptomyces antimycoticus
Pathway
sant03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sant00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QR300_19065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sant03021
]
QR300_19065
03400 DNA repair and recombination proteins [BR:
sant03400
]
QR300_19065
Enzymes [BR:
sant01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QR300_19065
Transcription machinery [BR:
sant03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QR300_19065
DNA repair and recombination proteins [BR:
sant03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QR300_19065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TarH
Motif
Other DBs
NCBI-ProteinID:
WJD97930
LinkDB
All DBs
Position
complement(4426344..4430258)
Genome browser
AA seq
1304 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITWVDEERRTRDLPSLEAHVSVERQQIEQRRDADLEARAKKLEAD
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWNRFKNLKVQDLEGDELL
YRELRDRFGTYFMGGMGAAALQKRLESFDLDEEAEKLREIIRTGKGQKKTRALKRLKVVS
AFLQTRNSPNGMVLDCIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDEEEREVKGE
GRAFGSAAEATMAFDARELSLQAKIDIRFPIGTVPPRGWTPPAPEAGDDGVGGGVWQPGD
SFRLRTTLGRALFNELLPEDYPFVDYSVGKKQLSEIVNDLAERYPKVIVAATLDNLKAAG
FHWATRSGVTVAISDVVVPEAKKGIIEGYEAQDEKVQKQYERGLITKDERTQELIAIWTK
ATNEVAEAMNANFPKTNPIFMMVDSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASF
REGLSVLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTDRGLKLE
IASKGADGVLRKAEDVETSVYARCLAEDIVVEGKVLAPAGTDLGDVLIDELVRHGVETVK
TRSVLTCESAVGTCAMCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVA
GDDITQGLPRVVELFEARTPKGVAPISEAAGRVRIEETEKTKKLVVTPDDGSDETAFGVS
KRARLLVGEGDRVDVGQPLTVGAVNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSIHDK
HIEIIIRQMLRRVTIIESGDAELLPGELVERSRFESENRRVVQEGGHPASGRPQLMGITK
ASLATESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRV
EPTEEAKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNQ
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagctgcggatcggcctcgccaccgctgatgacatc
cgtcagtggtcccacggtgaggtcaagaagccggaaaccatcaactaccgcaccctcaag
cccgaaaaggacggactcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggtaagtacaagcgcgtccgcttcaagggcatcatctgtgagcgctgcggtgtc
gaggtcacccgcgccaaggtgcgccgtgagcggatgggccacattgagctggccgctccc
gttacccacatctggtacttcaagggcgtgcccagccgtctgggctacctgctcgacctc
gccccgaaggacctcgagaaggtcatctacttcgccgcctacatgatcacgtgggtggac
gaggagcgccgcacgcgcgatctgccctcgctggaggcccatgtctccgtcgagcgtcag
cagatcgagcagcgccgcgacgccgacctggaggcccgcgccaagaagctcgaggcggac
ctcgccgagctcgaggccgagggtgccaaggccgatgtgcgccgtaaggtgcgcgagggc
gccgagcgtgagatgaagcagctgcgcgaccgcgcccagcgcgagatcgaccgtctcgac
gaggtgtggaaccgcttcaagaacctcaaggtccaggacctggagggcgacgagctgctc
taccgtgagctgcgtgaccgcttcggcacgtacttcatgggcggcatgggcgccgcggcg
ctgcagaagcgcctggagtccttcgacctcgacgaagaggccgagaagctccgcgagatc
atccggaccggcaagggccagaagaagacccgtgcgctcaagcgcctcaaggtcgtctcc
gccttcctgcagacccgcaacagccccaacggcatggtgctggactgcatcccggtgatc
ccgccggacctgcgtccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgtgtgatcaaccggaacaaccgcctcaagcgtctccttgacctc
ggtgcccccgagatcatcgtgaacaacgagaagcggatgctgcaggaggccgtcgacgcg
ctgttcgacaacggccgccgcggtcgcccggtgaccggtcccggtaaccgtccgctgaag
tccctcagcgacatgctgaagggtaagcagggccggttccgtcagaacctgctcggtaag
cgtgtcgactactcggcccgttcggtcatcgtcgtcggcccgcagctcaagctgcaccag
tgcggtctgcccaaggccatggcgctggagctcttcaagccgttcgtgatgaagcgcctg
gtggacctgaaccacgcgcagaacatcaagtcggccaagcgcatggtcgagcgcggccgc
acggtcgtgtacgacgtgctcgaagaggtcatcgccgagcacccggtgctgctgaaccgt
gcgccgaccctgcaccgcctcggcatccaggccttcgagccgcagctggtcgagggcaag
gccattcagattcacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctgtccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctcaagccggccgacggccggccggtgaccatgccgacccaggac
atggtgctgggcctgttcttcctcaccaccgacgaggaggagcgcgaggtcaagggcgag
ggccgggccttcgggtcggccgccgaggcgaccatggcgttcgacgcccgggagctctcg
ctccaggcgaagatcgacatccgcttcccgatcggcaccgtcccgccccgcggctggacc
ccgccggctccggaggcaggggacgacggcgtcgggggaggggtctggcagcccggtgac
agcttccggctgcgcaccacgctgggccgcgcgctcttcaacgagctgctgcccgaggac
tacccgttcgtcgactactcggtgggcaagaagcagctctccgagatcgtcaacgacctc
gccgagcgttaccccaaggtcatcgtcgcggcgacgctggacaacctgaaggcggccggt
ttccactgggccacccgctccggtgtcaccgtcgccatctccgacgtggtcgtgcccgag
gccaagaagggcatcatcgaggggtacgaggcgcaggacgagaaggtccagaagcagtac
gagcgtggtctgatcaccaaggacgagcgcacccaggaactgatcgcgatctggaccaag
gcgaccaacgaggtcgccgaggcgatgaacgcgaacttcccgaagaccaacccgatcttc
atgatggtcgactcgggcgcgcgcggaaacatgatgcagatgcgtcagatcgccggtatg
cgtggtctggtgtccaacgcgaagaacgagaccatcccgcggcccatcaaggcgtcgttc
cgtgagggtctctccgtgctggagtacttcatctccacccacggtgcccgtaagggtctc
gccgacaccgccctgcgtaccgccgactcgggttacctgacccgacgtctggtggacgtc
tcccaggacgtgatcatccgcgaggaggactgcggcaccgaccgtggcctcaagctcgag
atcgcgtccaagggtgcggacggcgtgctgcgcaaggcggaggacgtcgagaccagcgtg
tacgcgcgctgcctcgccgaggacatcgtcgtcgaggggaaggtcctggccccggccggt
accgacctgggcgatgtgctcatcgacgagctggtccgccacggcgtggagacggtcaag
acccgttcggtgctcacctgcgagtccgccgtcggcacctgcgccatgtgctacggccgc
tcgctggcgaccggcaagctggtggacatcggtgaggcggtcggcatcatcgccgcccag
tccatcggtgagcccggcacccagctgacgatgcgtaccttccacaccggtggtgtggcc
ggtgacgacatcacccagggtctgccgcgtgtcgtcgagctcttcgaggcccgtacgccc
aagggtgtcgccccgatctcggaggcggccggccgcgtccggatcgaggagaccgagaag
accaagaaactcgtcgtcaccccggacgacggctccgacgagaccgccttcggcgtctcc
aagcgagcccgtctcctggtgggcgagggcgaccgcgtcgacgtcggccagccgctgacc
gtgggtgccgtcaacccgcacgacgtgctgcgcatcctcggccagcgcgccgtccaggtg
cacctggtgggcgaggtccagaaggtctacaactcgcagggtgtgtcgatccacgacaag
cacatcgagatcatcatccggcagatgctgcgccgtgtgacgatcatcgagtccggcgac
gcggagctgctgccgggcgagctcgtggagcgctcgcgcttcgagtcggagaaccgtcgt
gtggtccaggaaggcggccacccggcctccggccgtccgcagctgatgggtatcaccaag
gcctcgctggcgaccgagtcctggctgtcggcggcgtccttccaggagacgacccgggtg
ctcaccgacgcggcgatcaacgccaagtcggactccctgatcggcctcaaggagaacgtg
atcatcggtaagctcatcccggccggtacgggcctgtcccgctaccgcaacatccgggtc
gagccgaccgaggaggcgaaggccgcgatgtactcggccgtcggttacgacgacatcgac
tactcgcccttcggcacgggctccggccaggcggttccgctggaggactacgactacggt
ccgtacaaccagtag
DBGET
integrated database retrieval system
