Streptomyces antimycoticus: QR300_38460
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Entry
QR300_38460 CDS
T09335
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sant
Streptomyces antimycoticus
Pathway
sant03030
DNA replication
sant03430
Mismatch repair
sant03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sant00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QR300_38460 (dnaE)
03430 Mismatch repair
QR300_38460 (dnaE)
03440 Homologous recombination
QR300_38460 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sant03032
]
QR300_38460 (dnaE)
03400 DNA repair and recombination proteins [BR:
sant03400
]
QR300_38460 (dnaE)
Enzymes [BR:
sant01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QR300_38460 (dnaE)
DNA replication proteins [BR:
sant03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QR300_38460 (dnaE)
DNA repair and recombination proteins [BR:
sant03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QR300_38460 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WJE01353
LinkDB
All DBs
Position
complement(8823244..8826774)
Genome browser
AA seq
1176 aa
AA seq
DB search
MAPPFTHLHVHTQYSLLDGAARLKDLFAACQEMGMSHLALTDHGNLHGAYDFFQQATAAG
VTPVIGIEAYVAPESRRTKRKIQWGQPHQKRDDVSGSGGYTHKTIWAADATGLHHLFRLS
SDAYAQGWLQKWPRMDKEVIAEHAEGLIASTGCPSGELQTRLRLGQFDEALKAASEYQDI
FGKDRYFLELMDHGIEIERRVRDGLLEIGRKLGIPPLVTNDSHYTYADEATAHDALLCIQ
TGKSLSDLDRFRFDGTGYYLKSAAEMYAIDSSDAWQEGCRNTLLVAEQIDTTGMFDKRDL
MPRFDVPDGHTEVTWFREEVRRGMARRYPGGVPEDRQKLAAYEMDVIIQMGFPGYFLVVA
DFIMWAKQQGIAVGPGRGSAAGSIVSYAMGITDLDPVEHGLIFERFLNPERVSMPDVDID
FDERRRVEVIRYVTEKYGADKVAMIGTYGTIKAKNAIKDSARVLGYPYAMGDRITKAMPA
DVGGRGIPLSGITDPEHPRYSEAGEVRAMYENEPDARKVIDTAKGVEGLVRQMGVHAAGV
IMSSEPIVDHVPVWVRHTDGVTITQWDYPTCESLGLLKMDFLGLRNLTIMDDAVTMVRAN
KGVDLKLLDLPLDDRRTFEMLGGGHTLGVFQFDGSAMRSLLRLMKPNQFEDITAVTALYR
PGPMGMNSHINYALRKNGQQEITPIHPELEEPLKEVLDITYGLVVYQEQVQKAAQALAGY
SLGQADLLRRAMGKKKQEVLDKEFLPFRDGCRERGYSDEAVQAVWDVLVPFAGYAYNKAH
AAAYALVSYWTAYLKANYPAEYMAALLTSVRDDKDKSAVYLNECRRMGIKVLPPNVNESE
ANFTAQGDDVILFGLTAVRNVGQNVVEAIIRGRKAKGKYASFPDYLDKVEAVVCNKRTTE
SLIKAGAFDEMGHTRKGLTAHYEALIDNVVAVKRKEAEGQFDLFGGMAGEGGDGEGPGFG
PDVEFPDEEWDKPYLLAQEREMLGLYVSDHPLLGLEQLLAGTADATVAQLTGGDFADGTI
VTVGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMVFPATYQLVSAQLLEDAVVFVKGR
LDKREDVPRLVAMELAVPDLSARHAPLRLEMLEAHVTPHSVQQLKEILQAHPGPTEVHLR
VRGRTGTTVYRLGYRIGIRPEFWADLKAAVALTRAT
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
gtggcaccgcctttcacccatctgcatgtgcacacgcagtactcgctcctggacggcgcg
gcccggctgaaggatctcttcgcggcctgccaggaaatgggcatgtcgcacctcgccctg
accgaccacggcaatctgcacggcgcgtacgacttcttccagcaggccacggccgcgggc
gtgacgccggtcatcgggatcgaggcgtatgtcgccccggagtctcggcgcaccaagcgc
aagatccagtgggggcagccccatcagaagcgcgacgatgtctccggctcgggcggctac
acccacaagacgatctgggcggcggacgccaccgggctgcaccatctgttccggctgtcg
tcggacgcgtatgcgcagggctggctgcagaagtggccgcggatggacaaggaggtcatc
gccgaacacgccgaggggctgatcgcctcgaccggctgtccgtccggtgagctgcagacc
cggctgcggctgggccagttcgacgaggcgctgaaagccgcctccgaataccaggacatc
ttcggcaaggaccggtatttcctggagctgatggaccacggcatcgagatcgagcgccgg
gtccgggacgggctgctggagatcggcaggaagctgggcatcccgccgctggtgacgaac
gactcgcactacacctacgcggacgaggccaccgcccacgatgcgctgctgtgcatccag
accggcaagagcctctccgacctggaccgcttccgcttcgacggcaccggctactacctc
aagtccgccgccgagatgtacgccatcgactcctcggacgcctggcaggagggctgccgc
aacaccctgctggtcgccgagcagatcgacaccaccggcatgttcgacaagcgcgacctc
atgccccggttcgatgtgcccgacggccacaccgaggtcacgtggttccgcgaggaggtc
cggcgcgggatggcccggcgctatccgggtggcgtccccgaggaccgtcagaagctggcc
gcgtacgagatggacgtcatcatccagatggggttcccgggctacttcctcgtggtcgcc
gacttcatcatgtgggccaagcagcagggcatcgccgtcgggccgggccgtggttcggcg
gccggttcgatcgtctcgtacgcgatgggcatcaccgacctcgacccggtcgagcacggc
ctgatcttcgagcggttcctcaaccccgagcgggtgtccatgccggacgtcgacatcgac
ttcgacgagcgccggcgggtcgaggtgatccgctatgtgacggagaagtacggcgccgac
aaggtggccatgatcggtacctacggcaccatcaaggccaagaacgccatcaaggactcg
gcccgggtgctcggctatccgtacgcgatgggcgaccgcatcaccaaggccatgcccgcc
gacgtcggcggcaggggcatcccgctgtccggcatcaccgacccggaacacccgcggtac
tccgaggcgggcgaggtgcgggcgatgtacgagaacgagccggatgcgcggaaggtcatc
gacaccgccaagggtgtcgagggcctggtgcggcagatgggtgtgcacgccgccggcgtg
atcatgtcgagcgagccgatcgtggaccatgtcccggtctgggtgcggcacaccgacggg
gtcacgatcacgcagtgggactaccccacctgtgagtcgctcggcctgctgaagatggac
ttcctgggcctgcgcaacctcaccatcatggacgacgccgtcacgatggtgcgcgccaac
aagggcgtcgacctgaagttgctcgatctgccgctggacgaccgcaggaccttcgagatg
ctcggaggtggccacaccctcggtgtgttccagttcgacggcagcgcgatgcgctctctc
ctgcggctgatgaaaccgaaccagttcgaggacatcaccgcggtcaccgccctgtaccgg
ccgggcccgatgggcatgaactcgcatatcaactacgcgctgcggaagaacgggcagcag
gagatcaccccgatccaccccgagctggaggagccgctcaaggaggtcctcgacatcacc
tacggcctggtcgtttaccaggagcaggtgcagaaggccgcccaggccctcgcgggctac
tcactcggccaggccgacctgctgcgccgtgccatgggcaagaagaagcaggaggtcctg
gacaaggagttcctcccgttccgggacggctgccgggagcgcggctactccgacgaggcc
gtgcaggcggtctgggacgtcctggtgcccttcgcgggttacgcctacaacaaggcgcac
gcggccgcctatgcgctcgtctcgtactggaccgcgtacctcaaggccaactaccccgcc
gagtacatggcggcgctgctcacctcggtgcgggacgacaaggacaagtcggcggtctat
ctgaacgagtgccgtcgcatgggcatcaaggtgctgccgccgaacgtcaatgagtccgag
gccaacttcaccgctcagggtgatgatgtgatcctcttcggtctcacggcggtccggaac
gtcggtcagaacgtggtggaggcgatcatccgtggccgcaaggccaaggggaagtacgcc
tcgttcccggactacctggacaaggtcgaggcggtggtgtgcaacaagcgcaccacggaa
tcgctgatcaaggcgggcgccttcgacgagatgggccacacccgtaaggggctcacggcg
cactacgaagcgctgatcgacaatgtggtcgcggtcaagcgcaaggaggccgaggggcag
ttcgacctcttcggcggcatggccggtgagggcggggacggcgaggggccgggcttcggc
cccgacgtcgagttcccggacgaggagtgggacaagccgtatctgctcgctcaggagcgg
gagatgctcggtctgtacgtctccgaccaccctctcctcggcttggagcagttgctggcc
ggcacggcggacgccacggtcgcgcagctcaccggcggcgacttcgcggacggcacgatc
gtcacggtcggcggcatcatctccggtctgcagcgcaagatgaccaaacagggcaacgcc
tgggccatcgccaccgtggaggacctggccggctccatcgagtgcatggtcttcccggcc
acctatcagctggtgtcggcccagctcctcgaggacgcggtcgtcttcgtcaagggccgc
ctcgacaagcgcgaggacgtgccccggctggtcgccatggaactggcggtccccgacctc
agcgcccgccatgcccccctgcgcctggagatgctcgaagcgcacgtgacaccgcactcc
gtccagcagctcaaggagatcctccaggcccatccgggaccgaccgaggtacatctgcgg
gtgcgcggccggaccgggaccaccgtctaccggctgggctaccgtatcggcatccggccc
gagttctgggccgatctcaaagccgcggtggccctcacccgggccacatga
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