Streptomyces angustmyceticus: K7396_09815
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Entry
K7396_09815 CDS
T07927
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sanu
Streptomyces angustmyceticus
Pathway
sanu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sanu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K7396_09815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanu03019
]
K7396_09815
Messenger RNA biogenesis [BR:
sanu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
K7396_09815
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
UAL66796
LinkDB
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Position
complement(2199164..2200849)
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AA seq
561 aa
AA seq
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MSHPHPELGAPPKLPKGGLRVTPLGGLGEIGRNMTVFEYGGRLLIVDCGVLFPEEEQPGI
DLILPDFTSIRDRLDDIDGIVLTHGHEDHIGGVPYLLREKPDIPLIGSKLTLALIEAKLQ
EHRIRPYTLEVQEGQRERIGSFDCEFVAVNHSIPDALAVAIRTPAGMVVHTGDFKMDQLP
LDRRLTDLPAFARLGEEGIDLLLSDSTNAEVPGFVPPERDISNVLRTVFANAQKRIIVAS
FASHVHRIQQILDAAHEYGRRVAFVGRSMVRNMGIARELGYLQVPAGLVVDVKTLDDLPD
DEVVLVCTGSQGEPMAALSRMANRDHQIRIVQGDTVILASSLIPGNENAVYRVINGLTRW
GADVVHKGNAKVHVSGHASAGELLYFYNICKPKNLMPVHGEWRHLRANAELGALTGVPKD
RIVIAEDGVAVDLVDGVAKIVGKVQAGYVYVDGLSVGDVTEAHLKDRRILGDEGIISVFV
VVDSSTGKIVGGPDLHARGSGIEDAALAGVVPKIDEALTKAAQDGVSEAHQLQQLIRRSV
GKWVSDNYRRRPMILPVVVEV
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
ttgagtcatccgcatcctgagctcggcgccccgccgaagctccccaagggcggcctgcgc
gtcacccccctcggcggcctgggtgagatcggccgcaacatgacggtcttcgagtacggc
ggccggctgctgatcgtcgactgcggagtgctcttcccggaggaggagcagcccggaatc
gacctgatcctgccggacttcacgtccatccgggatcgcctcgacgacatcgacggcatc
gtgctgacgcacggccacgaggaccacatcggtggtgtcccctacctcctgcgggagaag
ccggacatccccctgatcggttcgaagctgaccctcgcgctcatcgaggccaagctccag
gagcaccgcatccgcccctacaccctcgaggtgcaggaggggcagagggagcggatcggc
tccttcgactgcgagttcgtcgccgtcaaccactccatcccggacgccctggccgtcgcc
atccgcacccccgcgggcatggtcgtccacaccggcgacttcaagatggaccagctcccg
ctggaccgccggctcaccgacctgcccgccttcgcgcggctcggcgaggagggcatcgac
ctcctcctctccgactccacgaacgccgaggtcccgggcttcgtcccgcccgagcgggac
atctccaacgtcctgcgcacggtcttcgcgaacgcccagaagcgcatcatcgtcgcgagc
ttcgccagccatgtgcaccgcatccagcagatcctcgacgcggcgcacgagtacggccgc
cgggtcgccttcgtgggccgttcgatggtccgcaacatgggcatcgcccgcgagctgggc
tacctgcaggtccccgccggcctggtcgtggacgtcaagacgctcgacgacctccccgac
gacgaggtcgtgctggtctgcacgggttcccagggcgagccgatggccgccctctcccgg
atggccaaccgcgaccaccagatccggatcgtccagggcgacacggtgatcctggcgtcc
tccctcatcccgggcaacgagaacgcggtctaccgcgtgatcaacggcctcacccgatgg
ggcgcggacgtcgtccacaagggcaacgccaaggtccacgtctcgggccacgcctcggcc
ggcgagctgctgtacttctacaacatctgcaagccgaagaacctgatgccggtgcacggc
gaatggcgccacctgcgcgccaacgccgagctgggcgccctgaccggggtgccgaaggac
cggatcgtcatcgccgaggacggggtcgcggtcgacctggtcgacggcgtcgccaagatc
gtcggcaaggtccaggcgggctacgtctacgtcgacggcctctcggtcggtgatgtcacg
gaggcccacctcaaggaccgccgcatcctgggcgacgagggcatcatctcggtcttcgtg
gtcgtggacagcagcaccggcaagatcgtcggaggcccggacctgcatgcgcgaggctcc
ggcatcgaggacgccgccctcgcgggcgtggtccccaagatcgatgaggccctgaccaag
gcggcccaggacggcgtctccgaagcgcaccagctccagcagctgatccgccgctcggtc
ggcaagtgggtgtcggacaactaccgccggcgcccgatgatcctccccgtggtcgtcgag
gtctga
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