Streptomyces angustmyceticus: K7396_19530
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Entry
K7396_19530 CDS
T07927
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
sanu
Streptomyces angustmyceticus
Brite
KEGG Orthology (KO) [BR:
sanu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sanu03016
]
K7396_19530
Enzymes [BR:
sanu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
K7396_19530
Transfer RNA biogenesis [BR:
sanu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
K7396_19530
Prokaryotic type
tRNA splicing ligases
K7396_19530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
UAL68439
LinkDB
All DBs
Position
4406901..4408094
Genome browser
AA seq
397 aa
AA seq
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MSYVEVPGAQVPIRMWTDPATVEGVAMQQLRNVATLPWIKGLAVMPDVHYGKGATVGSVI
AMHGAVCPAAVGVDIGCGMSAVKTSLTADDLPGDLSRLRSKIEQAIPVGRGMHDDPVDPG
RLHGYPTAGWGDFWSRFDGVADAVKFRQERATKQMGSLGSGNHFIEFCLDDAGAVWLMLH
SGSRNIGKELAEFHMGQAQKLPHNQGLVDRDLAVFIADTPPMAAYRNDLFWAQEYAKHNR
AVMMALFQDVVRKEFSKARPTFEPVISCHHNYVAEERYDGMDLLVTRKGAIRAGSGEYGI
IPGSMGTGSYIVRGLGNAASFNSASHGAGRKMSRNAAKKRFSTRDLEDQTRGVECRKDSG
VVDEIPGAYKPIEKVIDQQRDLVEVVAKLKQVVCVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacgtcgaggtgcccggcgcgcaggtgccgatccggatgtggacggatccggcc
acggtcgagggcgtcgcgatgcagcagctgcgcaatgtcgccaccctgccgtggatcaag
ggcctggccgtgatgccggacgtccactacggcaagggcgccacggtcggctcggtcatc
gccatgcacggcgcggtctgcccggcggcggtcggtgtggacatcggctgcgggatgagc
gcggtcaagacctcgctcaccgcggacgacctgcccggcgacctctcccggctccgctcg
aagatcgagcaggcgattccggtggggcgcgggatgcacgacgatcccgtcgaccccgga
cggctgcacggctacccgaccgcgggatggggcgacttctggtcgcggttcgacggggtg
gccgacgccgtcaagttccgccaggagcgcgccacgaagcagatgggttcgctgggcagc
ggcaaccacttcatcgagttctgcctcgacgacgccggcgcggtgtggctgatgctgcac
tccggttcccggaacatcggcaaggagctggccgagttccacatggggcaggcgcagaag
ctgccgcacaaccagggcctggtcgaccgcgacctcgccgtcttcatcgcggacaccccg
ccgatggcggcgtaccgcaacgacctgttctgggcgcaggagtacgccaagcacaaccgg
gccgtgatgatggcgctcttccaggacgtcgtccgcaaggagttcagcaaggccaggccg
acgttcgagccggtgatctcctgccaccacaactatgtggcggaggagcggtacgacggc
atggacctgctggtgacccgtaagggcgcgatccgggcgggcagcggcgagtacggcatc
atcccgggctcgatgggcaccggctcgtacatcgtcaggggactgggcaacgccgcgtcc
ttcaactccgcctcccacggcgccggccggaagatgagccggaacgccgcgaagaagcgg
ttctccacgcgggatctggaggaccagacgcggggtgtggagtgtcgtaaggactccggt
gtggtggacgagatccccggcgcctacaagccgatcgagaaggtcatcgaccagcagcgg
gacctggtcgaggtcgtggccaagctcaagcaggtggtgtgtgtgaagggctga
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