Streptomyces angustmyceticus: K7396_27020
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Entry
K7396_27020 CDS
T07927
Name
(GenBank) ATP-dependent helicase
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
sanu
Streptomyces angustmyceticus
Brite
KEGG Orthology (KO) [BR:
sanu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanu03019
]
K7396_27020
Enzymes [BR:
sanu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
K7396_27020
Messenger RNA biogenesis [BR:
sanu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
K7396_27020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_N
AAA_22
ResIII
AAA_19
AAA_25
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UAL69750
LinkDB
All DBs
Position
complement(6109700..6112552)
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AA seq
950 aa
AA seq
DB search
MIRRDVLEQLPVRTALPALRGALDGRGAAVLCAPPGTGKTTLVPLELAGLAGEGPRRRVL
VAEPRRIAARAAARRMAWLLGEKVGDRVGFTVRGERRAGPRTAVEVVTTGVLLQRLQRDP
ELVGVDVVVLDECHERHLDADTSAAFLLDVRETLRPELRLVAASATTDAEGWAGLLGGPE
GAAPVVEAAGVSHPVGVVWAPPERPVKPAHGMRVDPALLAHVAAVVRRALREQAGDVLCF
LPGVGEIGRVAGELAGVDAEVLQVHGRAPAEVQDAVLAGGDGRRRVVLATSVAESSLTVP
GVRVVVDSGLARVPRTDHARGLSALTTVRASRAAGRQRAGRAGREAPGVVYRCWSEGEDG
RLPAFPDPEIKVADLTAFALQAACWGDPAASGLALLDAPPAGALAAAREVLTAIGAVDGA
GRVTARGARMARLGLHPRLARALLDGAPEVGVRRAAEVVALLSEEPPRAYGDDLAAAWRT
ARRGGDAYAARWRQEARRLASAAGEPRAGAGAGVEAGAMDGAESDAHAEVAEVTEAQARS
DAQAAPAAPAAPAAPAAPASSDAPVAGADAGGRARSGVGAEGGSGEGGSGRAGRSRGRAA
AGGDDAVAGLIAALAFPERVARARGAGSYLMASGTGAELAGAGSAGQRAGWGRGPGASGG
GAGSGLRDAGWLAVAVADRPVAAVSARVRLAAVIDEETACAAARALYASGDEVRWSDGDV
VARSVTRLGAIELVSRPLSAPDPGLVRDAVVSGLRKEGPGLLRWAPAAVSLRQRMGFLHR
ELGEPWPDVSDAALLERAEEWLGVELGRARRRADLARVDAGQALSRLLPWATGDAARFDE
LAPERIEVPSGSRVRVDYDGEQPVLAVKLQELFGLQESPRVAGGRVAVLVHLLSPAGRPA
AVTADLASFWRDGYRSVRAELRGRYPKHPWPEDPSAAEPTRHTSARLKRG
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
gtgatccgtcgtgatgttcttgagcagttgcccgtgcgtactgcgctgcccgcgctgcgg
ggcgccctcgacgggcgtggtgccgcggtgttgtgcgcgccgccgggcaccggcaagacg
acgctggtgccgctggagctggcggggctggccggcgaggggccgcggcggcgggtgctg
gtcgccgagccgcggcggatcgcggcccgtgcggcggcgcggcggatggcctggttgctg
ggcgagaaggtcggggaccgggtcgggttcacggtgcgcggggagcggcgggccgggccc
cgtaccgctgtggaggtggtgacgaccggggtgctgctgcagcggctgcagcgggatccg
gagctggtgggcgtcgatgtggtggtgctcgacgagtgccatgagcggcatctcgacgcc
gatacctccgcggcgttcctcttggacgtacgggagacgctgcggcccgagctgcggctg
gtggcggcgtcggcgacgacggatgccgaggggtgggcggggctgctgggcggcccggaa
ggcgcggcgccggtggtcgaggcggcgggtgtgtcgcatccggtgggggtcgtgtgggcg
ccgccggagcggcccgtgaagccggcgcacgggatgcgggtcgatccggcgctgctggcg
catgtggcggccgtggtgcggcgggcgctgcgcgagcaggccggtgacgtgctgtgcttc
ctgcccggcgtcggagagatcgggcgggttgccggggagctggcaggggtggacgccgag
gtgctgcaggtgcacgggcgggctccggccgaggtgcaggacgcggtgctggcgggcggg
gacggccggcgccgggtggtgctggcgacgtcggtggccgagtccagcctgacggtgccg
ggcgtgcgggtggtggtggacagcgggctggcgcgggtgccgcggacggatcatgcgcgg
gggctcagtgcgctcacgaccgtgcgtgcctcccgggcggcgggccgtcagcgcgccggg
cgggcggggcgtgaggcgccgggtgtggtgtaccgctgctggtcggagggcgaggacggg
cggctgcccgcgttccccgatccggagatcaaggtcgccgatctgacggcattcgccctg
caggcggcctgctggggcgatccggcggcctccgggctggccctgctcgatgcgccgccg
gccggcgcgctggcggcggcgcgggaggtgctgacggcgatcggcgcggtggacggcgcc
ggccgggtgacggcacggggcgcacgtatggcgaggctggggctgcacccccggctggcg
cgggccctgttggacggcgcgccggaggtcggtgtgcggcgcgccgccgaggtggtcgcc
ctgttgagcgaggagccgccgcgggcgtacggggacgatctggcggccgcgtggcgtacg
gcacggcggggcggcgacgcgtacgcggcgaggtggcggcaggaggcgcggcgcttggcg
tcggcggcgggtgagccgagggccggggcgggcgcgggcgtggaggccggcgcgatggac
ggggcggaatcggacgctcacgcggaggtcgcggaggtcacagaggcccaggcgcgctcg
gacgcccaagctgcccctgcagcccctgcagcccctgcagcccctgcagcccctgcaagc
tcggacgccccagtggccggggcagatgcgggcggccgggcccgatcgggtgtcggtgcc
gaggggggctccggggagggcgggagcggccgggccggccgctcccgtggtcgtgccgcg
gcgggtggcgacgatgccgtcgccgggctgatcgccgcgttggcgtttcccgagcgggtg
gcgcgggcccggggggccgggagttatctgatggcgtcggggacgggggccgagttggcg
ggagcgggctccgcggggcagcgggccggatgggggcgcggtccgggggcttcgggcggg
ggtgccgggtcggggctgcgggatgcggggtggctggcggtcgcggtggcggaccggccg
gtggcggcggtgtccgcgcgggtccggctcgcggcggtgatcgacgaggagacggcgtgt
gccgcggcgcgggcgttgtacgcctcgggtgacgaggtccgctggtcggacggggatgtc
gtggccaggagcgtgacgcggctgggggcgatcgagctggtgtcgcggccgctgtccgcg
ccggatcccgggctggtgcgggacgcggtggtctcggggctgcggaaggaggggccgggt
ctgctgcggtgggcgccggcggcggtctcgctgcggcagcggatggggtttctgcatcgg
gagttgggcgagccgtggcccgatgtgtcggatgccgcactgctggagcgggccgaggag
tggctgggggtggagctgggccgggcgcggcggcgggccgatctggcgcgggtcgacgcg
gggcaggcgctgtcccggctgctgccgtgggcgaccggtgacgcggcgcgcttcgacgag
ctggcgccggagcgcatcgaggtgccgagcggttcgcgggtgcgggtggactacgacggc
gagcagcccgtactggccgtgaagctgcaggagttgttcggtctgcaggagtcgccgagg
gtggccggcgggcgggtggccgtgctggtgcatctgctgtcgcccgcggggcgtccggct
gccgtcacggcggatctcgcgtcgttctggcgggacggataccggtccgtgcgcgcggag
ttgcgcgggcgctaccccaagcatccctggccggaggacccttcggcggccgagccgacc
cggcacacctcggcgcggctcaagcggggctga
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