Sanguibacter sp. HDW7: G7063_03120
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Entry
G7063_03120 CDS
T06485
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sanw
Sanguibacter sp. HDW7
Pathway
sanw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sanw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G7063_03120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sanw03021
]
G7063_03120
03400 DNA repair and recombination proteins [BR:
sanw03400
]
G7063_03120
Enzymes [BR:
sanw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G7063_03120
Transcription machinery [BR:
sanw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G7063_03120
DNA repair and recombination proteins [BR:
sanw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G7063_03120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF4407
Motif
Other DBs
NCBI-ProteinID:
QIK82725
UniProt:
A0A6G7Z152
LinkDB
All DBs
Position
679976..683854
Genome browser
AA seq
1292 aa
AA seq
DB search
MLDVNVFDELRIGLATADDIRAWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAAPVTHIWFFKGVPSRLGYLLDI
APKDLEKVIYFAAYMITSVDADGRHEDLPNLQNEIDLEKKEITDRRDNEIETRAKRLEDD
LATLEAEGARADARRKVRDSAEREMAQLRKRSDAELDRLEEVWDKFKNLKVGDLLGDEML
YRSLADRYGNYFEGSMGAAAIQKRLQDFDLVAESELLREIIATGKGQKKTRALKRLKVVN
AFLTTTNSPSAMVLDAVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSISDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERAR
PVVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIHLHPLVCAAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPSDGRPVTMPSQDMIIGLFHLTSDREDAVGEGR
AFASVAEAIMAFDQGSLDLNAIVKIRMDDFVPPVDFEAPEGWESGTSLLVETTLGRALFN
ETLPIDYPYVNGVVDKKQLSAIVNELAEKYPKADVAESLDALKSAGFRWATRSGVTIAIS
DVTTPNDKREILDAHEERALRVQGQYEKGLITDDERRQELIEIWTQATDKVAAAMRSNFE
GRSRNTVYRMVGSGARGNWMQVRQIAGMRGLVANPKGEIIPRPIKSNYREGLSVVEYFIA
THGARKGLADTALRTADSGYLTRRLVDVSQDVIVREEDCGTERGLTLPVAKKGRDGSFTR
HDKVETSIYSRTLATAVEVDGKVVGEAGEDVGDVLIDVLVEAGVADLKVRSVLTCESRVG
TCAKCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASADDITQGLPRV
TELFEARTPKGEAPIAEFSGRITIDESDRSRRLVLTPDDGGEEIAYPVTKRARLLISDGE
HVEVGAQLVQGAVDPKKVLRILGPRQTQKHLVDEVQEVYRSQGVDIHDKHIEVIVRQMLR
RVTVLESGDTTLLPGELAERSRFEDANRAAVAEGGRPASGRPELMGITKASLATESWLSA
ASFQETTRVLTEAAMSGRRDPLLGLKENVILGKLIPAGTGMPRYRDVTVEPTEAAKAELY
PSFGYDEIDFPTLGMGSGDAIPLDEIDFGDYQ
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgacgtcaacgtcttcgacgagctgcgtatcggactggcgaccgcggacgacatc
cgcgcctggtcgcacggtgaggtcaagaagcccgagaccatcaactaccgcaccctcaag
cccgagaaggacggtctcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtgacgcgttcgaaggtccgtcgtgagcgcatgggccacatcgagctcgcagcgccc
gtcacgcacatctggttcttcaagggtgtgccctcgcgcctcggctacctgctcgacatc
gccccgaaggacctcgagaaggtcatctacttcgcggcgtacatgatcacgtcggtcgac
gccgacggtcgccacgaggacctccccaacctccagaacgagatcgacctagagaagaag
gagatcacggaccgccgtgacaacgagatcgagacgcgcgcgaagcgtctcgaggacgac
ctcgcgacgctcgaggccgagggcgctcgcgccgacgcccgccgcaaggtccgcgactcg
gccgagcgcgagatggcgcagctgcgcaagcgctcggacgcagagctcgaccgtctcgag
gaggtctgggacaagttcaagaacctcaaggtcggtgacctcctcggcgacgagatgctc
taccgctcgctcgccgaccggtacggcaactacttcgagggctcgatgggcgccgcggcg
atccagaagcgtctgcaggacttcgacctcgtcgccgagtccgagctgctccgcgagatc
atcgcgacgggcaagggccagaagaagacccgcgccctcaagcgcctcaaggtcgtcaac
gccttcctcacgacgacgaactcgccgtcggccatggtgctggacgccgtcccggtcatc
ccgccggaccttcgcccgatggtgcagctcgacggtggacgtttcgcgacgtcggacctc
aacgacctgtaccgccgcgtcatcaaccgcaacaaccgcctcaagcgtcttctcgacctc
ggtgcccccgagatcatcgtcaacaacgagaagcgcatgctccaggaggccgtggactcg
ctgttcgacaacggccgtcgtggccgcccggtgacgggccccggcaaccgcccgctcaag
tccatctcggacatgctcaagggcaagcagggtcgtttccgccagaacctcctcggcaag
cgcgtcgactactcgggccgttcggtcatcgtcgtcggcccgcagctcaagctgcaccag
tgcggcctgccgaagcagatggcgctcgagctcttcaagccgttcgtcatgaagcgtctc
gtcgacctcaaccacgcgcagaacatcaagtccgccaagcggatggtcgagcgcgcgcgc
ccggtcgtgtgggacgtcctcgaagaggtcatcaccgagcaccctgtcctcctcaaccgt
gctcccacgctgcaccgtctgggtatccaggcgttcgagccgcagctcgtcgagggcaag
gccatccacctgcacccgctcgtctgcgcggcgttcaacgccgacttcgacggcgaccag
atggctgtccacctgccgctgtccgccgaggcccaggccgaggcgcgcatcctcatgctc
tcgagcaacaacatcctcaagccgtcggacggccgtccggtgaccatgccctcgcaggac
atgatcatcggtctgttccacctgacgtcggaccgtgaggacgctgtgggcgagggccgc
gcgttcgcgtcggtcgccgaggcgatcatggcgttcgaccagggttcgctcgacctcaac
gcgatcgtgaagatccgcatggacgacttcgtgccgcccgtggacttcgaggcccccgag
ggctgggagtccggcacgtcgctcctcgtcgagacgacgctcggtcgcgcgctcttcaac
gagacgctcccgatcgactacccgtacgtcaacggtgtcgtcgacaagaagcagctctcg
gcgatcgtcaacgagctcgcggagaagtaccccaaggctgacgtcgccgagtcgctcgac
gcgctgaagtccgcgggcttccgctgggcgacgcgttcgggcgtcaccatcgcgatctcc
gacgtcacgacgccgaacgacaagcgcgagatcctcgacgctcacgaggagcgcgcgctc
cgtgtgcagggccagtacgagaagggcctcatcacggacgacgagcgtcgtcaggagctc
atcgagatctggacgcaggcgacggacaaggtcgctgctgccatgcgctcgaacttcgag
ggacgcagccgcaacacggtctaccgcatggtcggctcgggcgcgcgtggtaactggatg
caggtccgtcagatcgccggtatgcgcggtctcgtggcgaacccgaagggcgagatcatc
ccgcgcccgatcaagtccaactaccgtgagggcctctcggtcgtcgagtacttcatcgcg
acgcacggtgcccgtaagggtctggccgacacggccctccgtacggcggactccggctac
ctcacgcgtcgtctcgtcgacgtctcgcaggacgtcatcgtccgcgaggaggactgtggc
acggagcgtggcctcacgctcccggtcgcgaagaagggccgcgacggctcgttcacgcgt
cacgacaaggtcgagacctcgatctactcgcggacgctcgcgaccgcggtcgaggtcgac
ggcaaggttgtcggcgaggcgggcgaggacgtcggcgacgtgctcatcgacgtgctcgtc
gaggccggcgtggcggacctcaaggttcgttcggtcctcacgtgcgagtcgcgcgtcggc
acgtgcgcgaagtgctacggccgttcgctcgcgaccggcaagctcgtcgacatcggcgag
gccgtcggcatcatcgcggcccagtcgatcggtgagcccggcacgcagctgacgatgcgt
acgttccacaccggtggtgtggcctcggcggacgacatcacgcagggtcttccccgtgtc
accgagctcttcgaggcccgcacccccaagggtgaggcgccgatcgcggagttctccggc
cgcatcacgatcgacgagtccgaccgttcgcgtcgcctcgtcctcacgccggacgacggc
ggcgaggagatcgcgtacccggtgaccaagcgtgcccgtctgctcatctccgatggtgag
cacgtcgaggtcggtgcccagctcgtccagggtgcggtggaccccaagaaggtcctgcgc
atcctcggcccgcgccagacgcagaagcacctcgtcgacgaggtccaggaggtctaccgc
tcgcagggcgtggacatccacgacaagcacatcgaggtcatcgtccgtcagatgctccgt
cgcgtgacggtgctcgagtcgggcgacacgacgctcctcccgggtgagctcgcggagcgt
tcgcgcttcgaggacgccaaccgggccgcggtcgccgagggcggtcgcccggcctcgggt
cgtcccgagctcatgggcatcacgaaggcgtcgctcgcgaccgagtcgtggctgtccgcg
gcgtcgttccaggagacgacgcgcgtgctcacggaggccgcgatgagcggccgtcgtgac
ccgctcctcgggctcaaggagaacgtcatcctcggtaagctcatccctgccggtacgggt
atgccccgctaccgcgacgtcacggtcgagccgaccgaggcggcgaaggccgagctctac
ccgagcttcgggtacgacgagatcgacttcccgacgctcggcatgggctctggggacgcg
atcccgctcgacgagatcgacttcggcgactaccagtga
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