Sanguibacter sp. HDW7: G7063_06580
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Entry
G7063_06580 CDS
T06485
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sanw
Sanguibacter sp. HDW7
Pathway
sanw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sanw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G7063_06580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanw03019
]
G7063_06580
03400 DNA repair and recombination proteins [BR:
sanw03400
]
G7063_06580
Enzymes [BR:
sanw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G7063_06580
Messenger RNA biogenesis [BR:
sanw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G7063_06580
DNA repair and recombination proteins [BR:
sanw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
G7063_06580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Pribosyltran
AAA_22
RecQ_Zn_bind
MRFAP1
HEM4
Cas3-like_C_2
HTH_53
Motif
Other DBs
NCBI-ProteinID:
QIK84904
UniProt:
A0A6G7Z7G4
LinkDB
All DBs
Position
complement(1412037..1414331)
Genome browser
AA seq
764 aa
AA seq
DB search
MPPPPEDAWGGAPSGRGGPSTSPAPRQGARPDHHGASSATPRAAARTSRPQRAGLDGAVG
REAAETVLRRLVGREDARLREDQWTAIEALVAHQRRVLVVQRTGWGKSAVYFVATALLRE
AGEGPTVIVSPLLALMRDQVAAAERAGIRAVTINSSNVTEWDDIHEQIAAGEVDVLLCSP
ERLNNPDFRDTVLPRLAADAGLVVVDEAHCISDWGHDFRPDYRRIRDLVANLPVGIPVLA
TTATANERVTRDVAEQLAVHAGAPAGEDVLVLRGALDRESLHLAVLPVTDQPTRVAWLID
ALRAMPGSGIVYCLTVSAAEQVAEQLRGAGLEVRAYTGRTDTAEREQLEADLKADRVKAL
IATSALGMGFDKPDLGFVIHLGAPSSPIAYYQQVGRAGRGVDRATVVLVPGEEDQRIWEY
FGSLAFPAEEQVRTVIGALEQGGTMSLPQLETHVDLKRARLETMLKVLDVDGAVQRVRGG
WTATGQPWHYDTERYRRVDEARLREQRAMLDFERTEGCRMAFLRAQLDDPELEAGWRCGR
CDRCGTVTLPPLPDRAAIGAARERMDRPGIEISARRQWPSGMTNLGVDLAGRLAADELAE
PGRAVARLDGLGWSAPLRELFAATTPDGEVPRALRTAAARALDEWPGARTVDGIVLVASA
TRPQLVGHLAHGLGRYLGKPVVGEIAPAAGSAPGRHDVNSALRLAGVVERLQPRLSDAAL
AGLPGRSILLVDDYTESGWTLTVAARLLRRAGAASVLPFVLAQA
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccccgcccgaggacgcctggggcggcgcaccgtcaggccgcggcgggccgtcg
acgagcccggctccgcgccagggggcacgccccgaccaccacggtgcttcctctgccacg
ccccgtgctgcggctcggacgtcgcgcccgcagcgcgccgggctcgacggggccgtcggg
cgcgaggccgccgagaccgtcctgcgacgcctcgtcggacgcgaggacgcccgcctgcgc
gaggaccagtggaccgcgatcgaggcgctcgtcgcccaccagcgtcgcgtcctcgtcgtc
cagcgcaccggctggggcaagtccgccgtctacttcgtcgcgacagcgctgctgcgcgag
gccggcgagggcccgaccgtcatcgtctccccgctcctcgcgctcatgcgcgaccaggtc
gccgccgccgagcgtgccggcatccgcgccgtgacgatcaactcctcgaacgtcaccgag
tgggacgacatccacgagcagatcgcggcgggcgaggtcgacgtcctcctgtgctccccc
gagcggctcaacaaccccgacttccgcgacaccgtcctgccgcggctcgcggccgacgcg
gggctcgtcgtcgtcgacgaggctcactgcatctccgactggggccacgacttccggccc
gactaccggcgcatccgcgacctcgtcgcgaacctccccgtcggcatccccgtgctcgcg
acgaccgcgaccgcgaacgagcgcgtgacccgcgacgtcgccgagcagctcgccgtccac
gcgggcgcccccgcgggcgaggacgtgctcgtcctgcgcggcgcgctcgaccgcgagtcg
ctccacctcgcggtcctgcccgtcaccgaccagccgacccgcgtcgcgtggctcatcgac
gcgctgcgagcgatgcccggctcaggcatcgtctactgcctcacggtgtctgcggccgag
caggtcgccgagcagctccgcggcgcaggcctcgaggtcagggcgtacacgggccgcacc
gacaccgccgagcgcgagcagctcgaggccgacctcaaggccgaccgcgtcaaggcgctc
atcgcgacgagcgcgctcggcatgggcttcgacaagcccgacctcggcttcgtcatccac
ctcggcgccccgagctcgcccatcgcgtactaccagcaggtcggccgtgccgggcgcggc
gtcgaccgcgcgaccgtcgtcctcgtcccgggcgaggaggaccagcggatctgggagtac
ttcggctcgctcgccttccccgccgaggagcaggtgcgcaccgtcatcggcgcgctcgag
cagggcggcaccatgtcgctgccgcagctcgagacgcacgtcgacctcaagcgcgcccga
ctcgagacgatgctcaaggtcctcgacgtcgacggtgccgtccagcgcgtgcgcggcggc
tggaccgcgaccgggcagccgtggcactacgacaccgagcgctaccggcgcgtcgacgag
gcacggctgcgcgagcagcgcgccatgctcgacttcgagcgcaccgagggctgccgtatg
gcgttcctccgcgcccagctcgacgaccccgagctcgaggccgggtggcgctgcggccgc
tgcgaccgttgcggcaccgtcacgctgccaccgctgcccgaccgtgccgcgatcggcgcg
gcccgcgagcgcatggaccggcccggcatcgagatctcggcccggcgccagtggcccagc
ggcatgacgaacctcggcgtcgacctcgcaggacgtctcgcggccgacgagctcgccgag
ccggggcgagccgtcgcacgcctcgacggcctcggctggtcggctcccctgcgcgagctc
ttcgccgccacgacccccgacggcgaggtgccgcgcgccctgcggaccgcggccgcacgg
gcgctcgacgagtggcccggggcccgcaccgtcgacggcatcgtcctcgtcgcctccgcg
acccggccacagctcgtcgggcacctcgcgcacggcctcggccgctacctcggcaagccc
gtcgtcggcgagatcgcacccgccgccggcagcgcgcccggacggcacgacgtcaactcg
gcgctgcgcctcgcgggcgtcgtcgagcggctccagccccgcctgagcgacgcagccctc
gcgggcctgcccggccggtcgatcctcctcgtcgacgactacaccgagtccggctggacc
ctcaccgtcgcggcgcgactgctgcgccgcgccggggcggcctcggtcctgccgttcgtg
ctcgcgcaggcctga
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