Sanguibacter sp. HDW7: G7063_08250
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Entry
G7063_08250 CDS
T06485
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
sanw
Sanguibacter sp. HDW7
Brite
KEGG Orthology (KO) [BR:
sanw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanw03019
]
G7063_08250 (hrpB)
Enzymes [BR:
sanw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
G7063_08250 (hrpB)
Messenger RNA biogenesis [BR:
sanw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
G7063_08250 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
ParA
AAA_22
HA2_N
AAA_19
AAA_30
CON_HrpB
ResIII
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QIK84939
UniProt:
A0A6G7Z7J7
LinkDB
All DBs
Position
complement(1776408..1778894)
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AA seq
828 aa
AA seq
DB search
MLAAPPDLPVAPHLADVRTRLAEAGVLVVAAPPGTGKTTLVPPAVAADVAGRVVVTQPRR
VAARAAARRLAELCGEDVGGIVGHAVRGDVRRSARTRIEVATAGLLLRRLQSDPGLEGVD
VVVLDEVHERHLDADLLLALLVEVRRTLRPDLRVVAMSATLDAAAVAGLLGDGAPAPVVE
VAAETFPVEVRWTPPPARVARLDERGPTRGFLDHVAATARTALATSPGDVLVMLPGAREV
DTVARALEGARAADGGPVDVRRLHGRLPGAEQDLALREGPRRRVVVATAVAESSLTVPGV
RTVVDAGLAREPRTDHVRGLAGLVTVSVSRAGAEQRAGRAGRLGPGTVWRCWAENEHPRL
RPFAEPEIRTADLAAFVLAAACWGSASGDLALLDAPPAAALGAAHVTLAALGALDDDGRV
TARGRRIDALGTDPRLARALLDGAELVGPQRAAEVVALLDADVRATGADLVAAWRRLRRG
GPGSEEWRRAARRFAERLGDARGPADRLGDDAAAGLVVALAHPERVARRRPGGQGFLMAG
GTGARLPDGSPLAGATWLAIADADRGPGRSDALVRAAAPLDEDSALDAAGSLLLEETTLE
HRDGRLVATRRTMLGAITLVEERLPRPDRATVAAAVREGLRRDGLPSLSPAAARLRDRLA
LLHGTLGAPWPDVSDVALLARLDDWLGPDLGELRTPADLARRDANALRRLLPWPDAARLD
ELVPERIDLPAGTSAAVDYAQERPVLAAKVQEVFGWDETPRLVGGRVPVVLHLLSPARRP
AAVTSDLASFWRQGYPQVRAELRGRYPKHDWPEDPTTATASRGVRRRD
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
ctgctcgccgcgccgcccgaccttccggtcgcgccgcacctcgccgacgtccggacccgg
ctcgccgaggcgggcgtgctcgtcgtcgccgcaccgcccggcacgggcaagacgacgctc
gtgccgcccgccgtggcggctgacgtcgcaggccgcgtcgtcgtcacccagccacgcagg
gttgcggcgcgtgccgccgcgcgccgcctcgcagagctgtgcggcgaggacgtcggaggg
atcgtcgggcacgcggtgcgcggtgacgtgcgccgcagcgctcgcacgcgcatcgaggtc
gcgacggcgggcctcctgctgcgcaggctccagtcggacccggggctcgagggcgtggac
gtcgtcgtgctcgacgaggtccacgaacgccacctcgacgcggacctgctgctcgcgctg
ctcgtcgaggtgcggcgcacgctgcgcccggacctccgggtcgtcgcgatgtccgcgacg
ctcgacgcggccgccgtcgcggggctgctcggcgacggcgctcccgcgcccgtcgtcgag
gtcgcggccgagaccttccccgtcgaggtgcgctggacgccgccgcccgcgcgcgtcgcg
cggctcgacgagcgcggcccgacgcgcggcttcctcgaccacgtcgcggcgaccgcgcgc
accgcgctggcgacctctccgggcgacgtgctcgtcatgctgccgggagcgcgcgaggtc
gacacggtcgcccgcgcactcgagggcgcgcgtgcggccgacggtgggccggtcgacgtg
cggcggctccacgggcggctgccgggcgccgagcaggacctcgcgctgcgcgagggcccg
cggcgacgcgtcgtcgtcgcgaccgcggtcgcggagtcctcgctcaccgtcccgggcgta
cgcacggtcgtcgacgcggggctcgcgcgcgagccccgcacggaccacgtccgtgggctc
gcgggtctcgtcaccgtctcggtgagccgcgcgggtgccgagcagcgtgccggacgtgcc
ggacggctcggacccggcaccgtgtggcggtgctgggccgagaacgagcacccgcggctg
cggccgttcgcagagcccgagatccgcacggcggacctcgcggccttcgtgctcgcggcc
gcgtgctggggaagcgcctccggtgacctcgcgctcctggacgcgccgcccgcggccgcg
ctcggcgcggcgcacgtgacgctcgcagcgctcggtgcgctcgacgacgacggccgagtc
accgcgcgcggccgccggatcgacgcgctcggcacggacccgcgcctcgcccgcgcgctg
ctcgacggcgccgagctcgtcggccctcagcgcgcggccgaggtcgtcgcgctgctcgac
gccgacgtgcgggccaccggcgccgacctcgtcgcggcgtggcgacggctgcgccgcggc
ggtccgggcagcgaggagtggcgccgagcggcgcgccggttcgccgagcgcctcggcgac
gcccgcggacccgcggacaggctcggcgacgacgcggccgcgggcctcgtcgtcgcgctc
gcgcaccccgagcgcgtcgctcgtcggcgccccggcggtcaaggattcctcatggccggc
ggcacgggtgcacgcctgcccgacggctccccgctcgcgggagcgacgtggctagcgatc
gccgacgccgaccgcggcccgggccggtccgacgcgctcgtccgcgcggccgccccgctc
gacgaggactcggcgctcgacgccgcaggctcgctgctccttgaggagacgacgctcgag
caccgggacggccgtctcgtcgcgacccgtcgaacgatgctcggtgcgatcaccctcgtc
gaggaacgcctgccccgtcccgaccgggccaccgtcgcggctgcggtgcgggagggcctg
cgtcgtgacggccttccgtcgctctcgcccgccgcggcgcggctccgggaccgcctcgcg
ctgctgcacgggaccctcggggcgccctggcccgacgtctccgacgtggcgctgctcgca
cgtctcgacgactggctcggacccgacctcggcgagctcaggacgccggcggacctcgcg
cgtcgggacgcgaacgcgctccggcgtcttctgccgtggccggacgcggcgcggctcgac
gagctcgttcccgagcggatcgacctcccggccgggaccagcgccgcggtcgactatgcg
caggagcggccggtgctcgccgccaaggtgcaggaggtcttcggctgggacgagaccccg
cgcctcgtcggcggtcgcgtcccggtcgtgctccatctgctctcgcccgcgcgtcggcct
gcggccgtgacgagcgacctcgcctcgttctggcggcagggctacccgcaggtccgcgcc
gagctacgcggccgctatccgaagcacgactggccggaggacccgaccaccgcgaccgcc
tcgcgcggggttcggcgccgggactga
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