Sanguibacter sp. HDW7: G7063_08685
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Entry
G7063_08685 CDS
T06485
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
sanw
Sanguibacter sp. HDW7
Pathway
sanw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sanw00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
G7063_08685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sanw03021
]
G7063_08685
Transcription machinery [BR:
sanw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
G7063_08685
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QIK84948
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Position
complement(1869812..1871485)
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AA seq
557 aa
AA seq
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MHSSSSAERSSVAPNIPNPALPREFEHPVLQELVRRGTTDGRIDAESLRSACETAAVADA
KRLKAVYRAIAMLGIEVTLPATGKVAAAATKRATSATAKADVGSATATKAAPKRAAAKAA
PKAVEAEVETEDEVAAKPAAKKAPAKKAPAAKAPTKAAAAKKAAAAKTAKAADEGDEPVE
DDAEAVPGDEDLEDVEIDADEPETDTAEETEAKPAAAAAAATKPAEEAEESTSGFVYSDA
DDDDAPAQQVVTAGATADPVKDYLKQIGKVALLNAEQEVDLAKRIEAGLFAEERLTHAAG
ELAPKLRRELEWIASDGRRAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRA
VEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLG
REPTPEELAKELDMTPEKVVEVQKYGREPISLHTPLGEDGDSEFGDLIEDSEAVVPADAV
SFTLLQEQLHQVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYGVTRERIRQIESKTM
SKLRHPSRSQVLRDYLD
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcactcctcgagttctgccgaaaggtcatctgtggcgcccaacatcccgaaccccgcc
ctgccgcgcgagttcgagcaccccgtgctccaggagctcgtccggcgcgggacgaccgac
ggccggatcgacgccgagagcctgcgttccgcgtgcgagaccgctgcggtcgcggacgcc
aagcggctcaaggccgtctaccgtgcgatcgcgatgctcggcatcgaggtgacgctgccc
gcgaccggcaaggttgccgcggccgccacgaagcgtgcgacgtcggcgaccgcgaaggcg
gacgtcgggtcggcgaccgccacgaaggctgcgccgaagcgtgccgcagccaaggctgcg
ccgaaggccgtcgaggccgaggtcgagaccgaggacgaggtcgccgcgaagcctgccgcg
aagaaggcgcccgccaagaaggctccggccgcgaaggcgccgaccaaggccgccgcggcg
aagaaggccgctgccgcgaagaccgccaaggccgccgacgagggcgacgagccggtcgag
gacgacgccgaggctgtgcccggcgacgaggacctcgaggacgtcgagatcgacgcggac
gagcccgagacggacacggccgaggagaccgaggcgaagcctgccgctgctgctgccgcg
gccaccaagcctgccgaggaggccgaggagtccacgagcggcttcgtctactccgacgcc
gacgacgacgacgccccggcgcagcaggtcgtcacggccggtgcgaccgctgacccggtc
aaggactacctcaagcagatcggcaaggtcgccctcctcaacgccgagcaggaggtcgac
ctcgccaagcgcatcgaggcgggactcttcgccgaggagcggctgacccacgctgcgggc
gagctcgcccccaagctgcgtcgtgagctcgagtggatcgcgtccgacggccgtcgcgcg
aagaaccacctgctcgaggccaacctgcgcctcgtcgtctcgctcgcgaagcgctacacg
ggtcgcgggatgctcttcctcgacctcatccaggagggcaacctcggcctcatccgtgct
gtcgagaagttcgactacaccaagggctacaagttctcgacgtacgcgacgtggtggatc
cgtcaggcgatcacgcgtgccatggctgaccaggcgcgcacgatccgcatccccgtccac
atggtcgaggtcatcaacaagctcgcccgcgtccagcggcagatgctccaggacctgggc
cgcgagcccacgcccgaggagctcgccaaggagctcgacatgacccctgagaaggtcgtc
gaggtccagaagtacggccgcgagcccatctcgctccacacgccgctcggcgaggacggc
gacagcgagttcggtgacctcatcgaggactccgaggccgtcgtcccggcggacgccgtg
agcttcacgctcctgcaggagcagctccaccaggtgctcgacacgctctccgagcgtgag
gccggcgtcgtctcgatgcgcttcggactcaccgacgggcagcccaagacgcttgacgag
atcggcaaggtctacggcgtgacgcgtgagcgcatccgtcagatcgagtcgaagacgatg
tcgaagctgcgtcacccgagccgctcgcaggttctgcgcgactacctcgactga
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