Sanguibacter sp. HDW7: G7063_10540
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Entry
G7063_10540 CDS
T06485
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sanw
Sanguibacter sp. HDW7
Pathway
sanw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sanw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G7063_10540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sanw03021
]
G7063_10540
03019 Messenger RNA biogenesis [BR:
sanw03019
]
G7063_10540
Transcription machinery [BR:
sanw03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
G7063_10540
Messenger RNA biogenesis [BR:
sanw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
G7063_10540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
VAD1-2
AAA_25
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
QIK84007
LinkDB
All DBs
Position
complement(2301282..2303333)
Genome browser
AA seq
683 aa
AA seq
DB search
MTDTTSAPSGALTAMRLAELQTVASGLGVKGTSKMRKSDLVEAIKGARGAAASKPRTEKA
AQAEKPATARSAEKPAAEKAAAEKPAAEKAAGTPDREERAERPAREDRARREDGRRPARG
ERPRRGDDAEQRAEEARKRAEARSGQRRDEQGAGEETPRAAREVVAADLASIERGLERGQ
RRRAGRDQGPAEGQDKNQGQGQQSRQSRQSQQGQQGQQGQPQNQQGGQGQRPAGQPQAGQ
PQQEQGFEDDERGGRRRRGRDRYRERDRKRGRSRTGNLDLDAEDFEIHEDDVLVPIAGIL
DIRDNMAFVRTSGYLPGPSDVYVSMGQVKKSGLRRGDAITGAVRQPHEGDQGPQSNIARA
KANALVRLDTVNGDVPSKAHERPDFAKLTPLYPQERLRLENPAATKLTPRVIDIVAPIGK
GQRGLIVAPPKAGKTIIMQQIANSITANNPEVHLMVVLVDERPEEVTDMERTVDGEVIAS
TFDRPATDHTMVAELAIERAKRLVELGQDVVVLLDSLTRLSRAYNLAAPASGRILSGGVD
ASALYPPKRFFGAARNIENGGSLTILASALVETGSKMDEVIFEEFKGTGNMELRLSRSLA
DKRIFPAVDVNASGTRREEILMGGDELKIVWKLRRLLSGLDQQQAIELLLGKFKETKSNV
EFLLQVQKTTPTTAHDDDAGKTV
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
gtgactgacaccacctccgctccctccggcgcactcacagcgatgcgcctcgccgagctc
cagacggtcgcgtccggcctcggcgtcaagggaacctcgaagatgcgcaagagcgacctc
gtcgaggcgatcaagggagcccgcggcgccgccgcgtccaagccccggaccgagaaggcc
gcgcaggcagagaagcctgcgaccgcccggtccgccgagaagcccgccgccgagaaggcg
gccgccgagaagcccgccgccgagaaggcggccggaacccccgaccgcgaggagcgcgcc
gagcgccccgcccgcgaggaccgcgctcgtcgtgaggacggccgccggccagcgcgtggc
gagcgtccgcgtcgcggcgacgacgccgagcagcgcgccgaggaggcccgtaagcgggcc
gaggcccgcagcgggcagcgtcgcgacgagcagggtgctggcgaggagacgccgcgcgcc
gcgcgcgaggtcgtcgccgccgacctcgcctcgatcgagcgtggcctcgagcgcggccag
cgccgtcgcgccggccgcgaccagggccccgccgaggggcaggacaagaaccaggggcag
ggccagcagtcgcggcagtcgcggcagtcgcagcagggccagcagggtcagcagggtcag
ccgcagaaccagcagggcggccagggtcagcgcccggccggccagccccaggccggccag
ccccagcaggagcagggcttcgaggacgacgagcgcggcggccgtcgccgtcgcggtcgc
gaccgctaccgcgagcgcgaccgcaagcgcggccgcagccgcacgggcaacctcgacctg
gacgccgaggacttcgagatccacgaggacgacgtcctcgtgcccatcgccgggatcctc
gacatccgcgacaacatggcgttcgtccgcacgagcggctacctgccgggcccgagcgac
gtctacgtctccatgggtcaggtgaagaagtccggcctccgccgcggcgacgcgatcacg
ggtgccgtgcgccagccccatgagggcgaccagggcccgcagtcgaacatcgcgcgcgcc
aaggccaacgccctcgtgcgcctcgacaccgtcaacggcgatgtgccgtcgaaggcgcac
gagcgtcccgacttcgcaaagctcacgccgctgtacccgcaggagcggctgcgcctcgag
aaccccgcggcgacgaagctcacgccgcgtgtcatcgatatcgtcgcgccgatcggcaag
gggcagcgcggcctcatcgtcgcgccgcccaaggcgggcaagacgatcatcatgcagcag
atcgcgaactcgatcacggcgaacaaccccgaggtccacctcatggtggtgctcgtggac
gagcgccccgaggaggtcacggacatggagcggacggtcgacggcgaggtcatcgcctcg
acgttcgaccgccccgccacggaccacacgatggtcgccgagctcgcgatcgagcgcgcg
aagcggctcgtcgagctcgggcaggacgtcgtcgtgctcctcgactcgctcacgcgcctg
tcgcgcgcctacaacctcgccgcccccgcgtcgggccgcatcctctccggtggtgtcgac
gcttcggcgctctacccgccgaagcggttcttcggtgcggcgcgcaacatcgagaacggc
ggctcgctgacgatcctcgcctcggcgctcgtcgagacgggctcgaagatggacgaggtg
atcttcgaggagttcaagggcaccggcaacatggagctgcgtctgtcgcggagcctcgcc
gacaagcggatcttccccgccgtcgacgtcaacgcgtcgggcacgcgccgtgaggagatc
ctcatgggcggcgacgagctgaagatcgtctggaagctccgccgcctgctctccgggctc
gaccagcagcaggccatcgagctgctgctcggtaagttcaaggagacgaagtcgaacgtc
gagttcctgctccaggtgcagaagacgacgccgacgacggcgcacgacgacgacgcgggc
aagaccgtctga
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