Streptomyces aureoverticillatus: G3H79_08690
Help
Entry
G3H79_08690 CDS
T08343
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
saov
Streptomyces aureoverticillatus
Pathway
saov03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
saov00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G3H79_08690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saov03019
]
G3H79_08690
03400 DNA repair and recombination proteins [BR:
saov03400
]
G3H79_08690
Enzymes [BR:
saov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G3H79_08690
Messenger RNA biogenesis [BR:
saov03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G3H79_08690
DNA repair and recombination proteins [BR:
saov03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
G3H79_08690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
RecQ_Zn_bind
Pribosyltran
AAA_22
MarR_2
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
QIB43128
LinkDB
All DBs
Position
complement(2444906..2447065)
Genome browser
AA seq
719 aa
AA seq
DB search
MDDLELRTEADTILAELVGDPGGSARLREDQWQAVSALVNDRRRALVVQRTGWGKSAVYF
VATALLRRRGSGPTVIVSPLLALMRNQVEAADRAGIKARTINSANPEEWDTIYEEVERGE
TDVLLVSPERLNSVDFREQLLPKLAATTGLLVVDEAHCISDWGHDFRPDYRRLRAMLADL
APGVPVLATTATANARVTADVAEQLGTGAGEALVLRGALDRESLRLGVVRLPDAAHRLAW
LAEHLDELQGSGIIYTLTVAAAEEATAYLRQRGFPVSSYTGRTENADRLQAEEDLLANRV
KALVATSALGMGFDKPDLGFVLHLGSPSSPIAYYQQVGRAGRGVEHADVVLLPGKEDEAI
WRYFADTAFPPETQVRQTLAALADAGRPLSVPALEAAVELRRSRLETMLKVLDVDGAVKR
VKGGWTSTGQPWVYDTERYAWVARQRAAEQQAMRDYVSADGCRMEFLRRQLDDEGAAPCG
RCDNCAGAWVDASVSEQTLTAAAKELDRPGVEIEPRRMWPTGMPALGIDLKGRIPAREQC
STGRALGRLSDIGWGNRLRPLLAENAPDGPVPDEVLRAAVAVLADWARSPGGWASGAPDA
AARPVGVVAVPSLARPQLVGSLAEGIASVGRLPFLGTLTYTGPDGAHAARRSNSAQRLRA
LSGVFAVSDELAAALAGAAGPVLLVDDYTDSGWTLAVAARLLRRAGGDGVLPLVLAAAG
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggacgatctggagctgcgcaccgaggccgacacgatcctcgccgagctggtcggcgac
ccgggaggttccgcgcggctgcgggaggaccagtggcaggcggtgtcggccctggtcaac
gaccggcggcgggcgcttgtggtgcagcggacgggctggggcaagtccgcggtgtacttc
gtcgccaccgctctgctgcggcggcgcggctccggtccgacggtgatcgtctcgccgctg
ctcgcgctgatgcgcaaccaggtggaggcggcggaccgcgccggaatcaaggcgcgcacc
atcaactcggcgaacccggaggagtgggacaccatctacgaggaggtggagcgcggcgag
accgacgtcctcctcgtgagcccggagcggctcaactcggtggacttccgcgagcagttg
ctgcccaagctcgcggccacgaccggtctcctcgtggtcgacgaggcgcactgcatctcc
gactggggacacgacttccgccccgactaccgcaggctgcgggcgatgctcgccgacctc
gcccccggcgtgccggtcctcgccaccacggcgaccgccaacgcgcgcgtgacggcggac
gtggccgagcagctgggcacgggcgccggggaggcgcttgtgctgcggggcgccctggac
cgggagagtctgcgcctcggcgtggtccggctgcccgacgccgcgcaccgcctcgcctgg
ctcgcggagcatctggacgaactgcagggctcggggatcatctacacgctcacggtggcc
gcggccgaggaggccaccgcctatctgcgccagcgcggcttccccgtgtcctcctacacc
gggcgcacggagaacgcggaccggctgcaggccgaggaggacctgctcgccaaccgggtc
aaggcgctggtcgccacgtccgcgctcggcatgggcttcgacaagccagacctgggcttc
gtgctccacctgggctcgccgtcctcgccgatcgcgtactaccagcaggtgggccgcgcg
gggcgcggcgtggagcacgccgacgtggtgctgctgcccggcaaggaggacgaggcgatc
tggcgctacttcgccgatacggccttcccgcccgagacccaggtccgccagacgctcgcc
gccctcgcggacgcggggcggccgctgtccgtgcccgccctggaggcggcggtggagctt
cggcgcagccgcctggagacgatgctgaaggtcctcgacgttgacggcgcggtcaagcgg
gtcaagggcggctggaccagcacggggcagccctgggtgtacgacacggagcggtacgcg
tgggtggcgcggcagcgggccgccgagcagcaggccatgcgcgactacgtgagcgcggac
gggtgccggatggagttcctgcgccgccagctcgacgacgagggcgcggccccgtgcggg
cgctgcgacaactgcgcgggcgcctgggtcgacgcctccgtgtccgagcagacgctgacg
gcggcggcgaaggaactggaccgcccgggagtggagatcgagccgcgccggatgtggccc
acgggcatgcccgccctgggcatcgacctcaaggggcgcatccccgcccgggagcagtgc
tccaccgggcgtgccctggggcggctctcggacatcggctggggcaaccggctgcgcccg
ctgctcgccgagaacgcgcccgacgggccggtccccgacgaggtgctgcgcgccgcggtg
gcggtcctcgccgactgggcgcgctccccgggaggttgggcttcgggcgccccggacgcc
gccgcgcggccggtcggagtcgtcgccgtgccgtccctagcccgcccgcagctggtcggt
tccctcgccgagggaatcgcgagcgtcggccgcctgcccttcctcgggaccctgacgtac
accggaccggacggcgcgcacgcggcacgccgcagcaactccgcccagcgcctgagggcg
ctgtccggggtgttcgccgtctccgacgagctggccgccgcgcttgccggtgccgccggt
ccagttctgctcgtggacgactacacggactccggatggacgctcgcggtcgccgcgcgg
ctgctgcggcgagcgggcggcgacggggtgcttccgctggtgctcgcggcggcgggctga
DBGET
integrated database retrieval system
