KEGG   Streptomyces aureoverticillatus: G3H79_09920
Entry
G3H79_09920       CDS       T08343                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
saov  Streptomyces aureoverticillatus
Brite
KEGG Orthology (KO) [BR:saov00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:saov03032]
    G3H79_09920
   03036 Chromosome and associated proteins [BR:saov03036]
    G3H79_09920
   03400 DNA repair and recombination proteins [BR:saov03400]
    G3H79_09920
DNA replication proteins [BR:saov03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    G3H79_09920
Chromosome and associated proteins [BR:saov03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    G3H79_09920
DNA repair and recombination proteins [BR:saov03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      G3H79_09920
SSDB
Motif
Pfam: Bac_DNA_binding HC2 Extensin_1
Other DBs
NCBI-ProteinID: QIB43345
LinkDB
Position
complement(2749444..2750121)
AA seq 225 aa
MNKAQLVEAIADKVGGRQQAADAVDAVLDAVVRAVVSGDRVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPKNDVAVKKAPKGSLSGGASATVKKA
AAKKATTAKKAAAKKTTAKKTVAKKATTAKKATAKKTTAKKAAKTATAKKTTAKKTAKAA
TAKKTTAKKAAAKKAPAKKATAKKAPAKKSTARKTTAKKATARKK
NT seq 678 nt   +upstreamnt  +downstreamnt
gtgaacaaggcgcagctcgtagaagcgattgccgacaaggtcggtggccgtcagcaggcc
gccgacgccgtggacgcggttctggacgccgtcgtccgtgccgtcgtcagcggagaccgt
gtttcggtcactggtttcggctcgttcgagaaggtcgaccgtccggcccggtacgcccgc
aacccgcagaccggggagcgcgtccgggtcaagaagacctcggtgccccgcttccgcgcg
ggtcagggcttcaaggacctggtgagcggctcgaagaagctcccgaagaacgacgtggcg
gtcaagaaggcgcccaagggcagcctgtcgggcggcgcttcggcgacggtcaagaaggcg
gcggccaagaaggccaccaccgccaagaaggcggcggcgaagaagaccaccgccaagaag
accgtcgcgaagaaggccaccaccgccaagaaggcgacggccaagaagaccaccgccaag
aaggcggcgaagacggccacggccaagaagaccacggccaagaagaccgccaaggcggcc
acggcgaagaagaccaccgccaagaaggcggcggccaagaaggctcccgccaagaaggcc
accgccaagaaggcgcccgccaagaagtccacggcgcgcaagacgaccgccaagaaggcc
accgcccgcaagaagtaa

DBGET integrated database retrieval system