Streptomyces aureoverticillatus: G3H79_11950
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Entry
G3H79_11950 CDS
T08343
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
saov
Streptomyces aureoverticillatus
Pathway
saov03420
Nucleotide excision repair
saov03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
saov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G3H79_11950
03430 Mismatch repair
G3H79_11950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saov03400
]
G3H79_11950
Enzymes [BR:
saov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G3H79_11950
DNA repair and recombination proteins [BR:
saov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G3H79_11950
MMR (mismatch excision repair)
Other MMR factors
G3H79_11950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QIB43699
LinkDB
All DBs
Position
complement(3201695..3205324)
Genome browser
AA seq
1209 aa
AA seq
DB search
MSPRLTDPEQLKELLGIPFTPEQTACITAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAGELAERVRKALIRAGVTDPEAADPDNPPGEPVISTYHAFAGRLL
TDHGLRIGLEPTARLLADATRFQLAARVLREAPGPYPALTRSFPDLVSDLLALDSELAEH
LVDPGRLRAYDTELLRTLAGAKLTNADLRRVPETATARLQLAELVDRYRTAKRARDLLDF
GDQIAHSATLARTRADVGAILRDEFRVVLLDEYQDTSVAQRVLLSGLFGGGTGHPVTAVG
DPCQAIYGWRGASVANLDDFPDHFAHADGRPAARHALSENRRSGGRLLDLANGLAEPLRA
LHAGVEALRPAPGAERDGSVRCALLRTHGEEIDWIADSIAHLVATGKAPGEIAVLCRTAG
DFAEIQGALVARDVPVEVVGLSGLLHLPEVADLVAVCEVLQDPGANASLVRLLTGPRWRI
GPRDLALLGRRARLLVRHGHSAPDDPDRRLAEAVEGVDPSEVISLADALDTFLEGSADAS
GDDGLPFSADARVRFARLATELRDLRRSLADPLMDVLHRVLAVTGLEVELSASPHALAAR
RRETLSNFLDVAASFAANDPSASLLAFLGFLRTAAQYEKGLDNALPGGENTVKVLTAHKS
KGLEWDVVAVPGLVTGTFPSTQGREKWTAQAKVVPHALRGDADTLPDIDTWDAKGMKAFH
ADMKDHQHTEELRLGYVTFTRPRSLLLGSGHWWGPTQKKPRGPSDFLRALYDHCAAGHGE
IEAWADEPAEDEENPALQEKTADQVWPLPLDAASLTRRRAAADTVLAHLDRLTADDARSH
EEAHPASGEATTAYAAEPPEYAEDPDWPPPPDDEALAEAEEGVYEDDVHGGAAYGEAASG
EAVYGDASFEEAAYEEAAPPEDEDPTAWDSWPRQRPTPRVPHTRPHLTPEETRTLASWDR
DLDALTGELLRARESVRDVPLPATLTASQVLSLASDPDRLAQELARPMPRPPQPAARRGT
RFHAWVEARFEELRLPMLGPEELPGGGPGEAEIADERDLEALKEAFERTEYAHRTPYRVE
APFQLAIAGRVIRGRVDAVYKTGDGDDTTYEIVDWKTSRTQNADPLQLAVYRLGWADQQG
VPPESVGAAFLYVRSGETVRPTDLPGRAELERILLGEDGPEGPDAADGGRAGRGTAADRP
PDRTAPVGR
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
gtgtctcctcgcctcaccgaccccgagcagctcaaagagctcctcggtatcccgttcacc
ccggagcagacggcctgcatcaccgcgccgcccgccccgcaggtgatcgtggccggagcc
gggtcggggaagacgacggtgatggccgcgcgcgtggtgtggctggtcggcaccggccag
gtcgccccggagcaggtcctcggcctgacgttcacgaacaaggcggcgggtgagctcgcc
gagcgcgtccgcaaggccctcatcagggcgggcgtcaccgaccccgaggccgccgacccg
gacaaccctccgggcgagccggtcatctccacgtaccacgccttcgcgggccgcctgctc
accgatcacggcctgcgcatcggcctggagcccaccgcccgcctcctcgccgacgccacc
cgcttccagctcgccgcccgcgtgctgcgcgaggcccccggcccgtatcccgcgctgacg
cgctccttccccgacctcgtcagcgacctgctcgccctcgacagcgagctcgccgagcac
ctcgtggaccccggcaggctccgcgcgtacgacaccgaactcctgcgcaccctggcgggc
gccaagctcaccaacgccgacctgcgcagggtccccgagacggccaccgcccgcctccag
ctcgccgagctcgtcgaccggtaccgcaccgccaagcgcgcccgcgacctcctcgacttc
ggcgaccagatcgcccactccgcgaccctcgcccgcacccgcgcggacgtcggcgccatc
ctgcgcgacgagttccgcgtcgtcctgctcgacgagtaccaggacacgtcggtggcccaa
cgcgtcctgctgtccggcctgttcggcggcggcaccggccaccccgtcaccgccgtcggc
gacccctgccaggccatctacggctggcgcggcgcctccgtggccaacctcgacgacttc
cccgaccacttcgcgcacgccgacggccgccccgccgcccgccacgccctcagcgagaac
cgccgcagcggcggccgcctcctcgacctcgccaacggcctcgccgagcccctgcgcgcc
ctgcacgcgggcgtggaggccctgcggcccgccccgggcgccgagcgcgacggcagcgtg
cgctgcgcgctgctgcgcacgcacggcgaggagatcgactggatcgccgactccatcgcc
cacctcgtggccaccggcaaggctcccggtgagatcgcggtcctgtgccgcacggccggc
gacttcgccgagatccagggcgccctcgtggcccgcgacgtgcccgtcgaggtcgtcggc
ctgtccggcctgctgcacctgccggaggtcgccgacctcgtggccgtctgcgaggtcctc
caggacccgggcgccaacgcctccctggtgcgcctgctgaccggcccgcgctggcgcatc
ggcccgcgcgacctggccctcctcggccgccgcgcccgcctcctcgtgcggcacgggcac
agcgcgcccgacgaccccgaccggcggctcgccgaggccgtcgagggcgtcgatccgtcc
gaggtgatatcgctcgccgacgcgctcgacaccttcctggagggctcggccgacgcctcc
ggagacgacggcctgccgttctccgccgacgcgcgggtgcggttcgcgcgcctcgccacc
gaactgcgcgacctgcggcgctccctggccgacccgctgatggacgtcctgcatcgcgtc
ctcgccgtcaccggcctggaggtcgagctctccgcgtccccgcacgccctggccgcccgc
cgccgcgagaccctgtcgaacttcctcgacgtcgccgcctccttcgccgccaacgacccc
tcggcctcgctgctcgccttcctcggcttcctgcgcaccgccgcgcagtacgagaagggc
ctcgacaacgccctgcccggcggcgagaacaccgtcaaggtgctcacggcccacaagtcc
aagggcctggagtgggacgtcgtcgccgtgcccggcctggtcaccggcaccttcccgagc
acccagggccgcgagaagtggacggcccaggccaaggtcgtcccgcacgccctgcgcggc
gacgccgacaccctgcccgacatcgacacgtgggacgccaagggcatgaaggccttccac
gccgacatgaaggaccaccagcacaccgaggaactccgcctcgggtacgtgacgttcacc
cgcccccgcagcctcctgctcggctcgggccactggtggggtcccacccagaagaagccg
cgcggcccgtccgacttcctgcgggcgctgtacgaccactgcgcggccggccacggcgag
atcgaggcctgggcggacgaacccgccgaggacgaggagaacccggcgctgcaagagaag
acggccgaccaggtctggccgctcccgctcgacgccgcgtccctgacccgccgccgcgcc
gccgcggacaccgtcctcgcccacctggaccgcctgacggcggacgacgcccgctcccac
gaagaggcccaccccgcctccggcgaggccacgacggcgtacgccgccgaacctccggag
tacgccgaggacccggactggccgccaccaccggacgacgaggccctggccgaagccgaa
gagggggtctacgaagacgacgtccacggaggggcggcttacggagaagctgcttccgga
gaggccgtctacggagacgcctctttcgaagaagccgcttacgaagaagccgcgccaccg
gaggacgaggaccccacagcatgggattcctggccccggcaacgccccactccccgcgtc
ccgcacacgcgaccccacctcaccccggaggagacccgcaccctcgcctcctgggaccgt
gacctggacgccctcaccggcgagctcctgcgcgcccgcgagagcgtccgcgacgtcccg
ctgcccgccacgctcaccgcctcccaggtgctgagcctggccagtgacccggacaggctg
gcgcaggagctggcccgccccatgccccgcccgccgcagcccgcggcccgccgcggtacc
cgcttccacgcctgggtcgaggcgcgcttcgaagagctgcggctgcccatgctcggcccg
gaggaactgccgggcggcggccccggcgaggcggagatcgccgacgaacgcgacctggaa
gccctcaaggaagccttcgagcgcaccgagtacgcccaccgcactccgtaccgcgtcgag
gcccccttccagctcgccatcgcgggccgcgtcatccgcggccgcgtggacgccgtctac
aagaccggtgacggcgacgacaccacgtacgagatcgtcgactggaagaccagccgcacc
cagaacgccgaccccctccagctcgccgtctaccgcctcggctgggccgatcagcagggc
gtcccgccggagtcggtgggggccgccttcctctacgtacgcagcggcgaaaccgtccgc
cccacggacctgccgggccgggccgagctggagcggattctgctgggagaggacggaccg
gagggcccggacgccgcagacgggggccgcgcggggcgtgggacggcggccgaccggccg
cccgaccggaccgctcccgtgggccgatag
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