Streptomyces aureoverticillatus: G3H79_14420
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Entry
G3H79_14420 CDS
T08343
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
saov
Streptomyces aureoverticillatus
Pathway
saov03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
saov00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G3H79_14420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saov03021
]
G3H79_14420
03400 DNA repair and recombination proteins [BR:
saov03400
]
G3H79_14420
Enzymes [BR:
saov01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G3H79_14420
Transcription machinery [BR:
saov03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G3H79_14420
DNA repair and recombination proteins [BR:
saov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G3H79_14420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QIB44099
LinkDB
All DBs
Position
complement(3789085..3790107)
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQVGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKMK
LNGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctgattgctcagcgtccctcgttgaccgaagaggtcgtcgacgaattccgctcccgg
ttcgtgatcgagccgctggagccgggcttcggctacaccctcggcaactccctccgccgg
actcttctgtcctcgatcccgggtgcggccgtcacgtccatccggatcgacggtgtcctg
cacgagttcaccaccgtgccgggcgtcaaggaagacgtcaccgacctcatcctcaacatc
aagcagctcgtcgtctcctcggagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggcccgggtctggtcaccgccgccgacatcgcgcccccggccggtgtcgaggtgcacaac
cccgacctcgtcctcgccacgctcaacggcaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggctacgtctccgccgtgcagaacaagcaggtcggccaggagatcggc
cgcatcccggtcgactcgatctactcgccggtgctgaaggtcacgtacaaggtcgaggcc
acgcgtgtcgagcagcgcaccgacttcgacaagctgatcgtcgacgtcgagaccaagcag
gccatgcggccacgtgacgccatggcgtccgccggcaagacgctggtcgagctgttcggt
ctggcccgcgagctcaacatcgacgccgagggcatcgacatgggtccgtccccgacggac
gccgcgctcgccgctgatctggcgctgccgatcgaggagctcgagctcaccgttcggtcg
tacaactgcctcaagcgtgagggcatccactccgtgggtgagctcgtcgcccgctccgag
gccgacctcctcgacattcgcaacttcggtgcgaagtccatcgacgaggtcaagatgaag
ctcaacgggatgggtctggccctcaaggacagcccgcccggattcgacccgaccgctgcg
gccgacgccttcggcgccgacgacgacgcggacgccggtttcgtcgagaccgagcagtac
taa
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