Streptomyces aureoverticillatus: G3H79_14595
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Entry
G3H79_14595 CDS
T08343
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
saov
Streptomyces aureoverticillatus
Pathway
saov03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
saov00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G3H79_14595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saov03021
]
G3H79_14595
03400 DNA repair and recombination proteins [BR:
saov03400
]
G3H79_14595
Enzymes [BR:
saov01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G3H79_14595
Transcription machinery [BR:
saov03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G3H79_14595
DNA repair and recombination proteins [BR:
saov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G3H79_14595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TarH
Motif
Other DBs
NCBI-ProteinID:
QIB44133
LinkDB
All DBs
Position
complement(3810606..3814520)
Genome browser
AA seq
1304 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITFVDEERRTRDLPSLEAHVSVERQQIENRRDADLEARAKKLETD
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWNRFKNLKVQDLEGDELL
YRELRDRFGTYFDGSMGAAALQKRLESFDLDEEAERLREIIRTGKGQKKTRALKRLKVVS
AFLQTSNSPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDEEEREVIGE
GRSFGSTAEAIMAFDAKELSLQAKVDIRFPVGTFPPRGWTPPVDEDGDDSVGGGAYQQGD
SFRLRTTLGRALFNELLPEDYPFVDYSVGKKQLSEIVNDLAERYPKVIVAATLDNLKAAG
FFWATRSGVTVAISDVVVPEAKKAIVAGYEAQDEKVQKQYERGLITKEERTQELIAIWTK
ATNEVAEAMNANFPKTNPIFMMVDSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASF
REGLSVLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTERGLKLK
IAVRGEDGVLRKTENVETSVYARMLAEDVVIDGKVIAPANVDLGDVLIDALVANGVEEVK
TRSVLTCESAVGTCAFCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVA
GDDITQGLPRVVELFEARTPKGVAPISEAKGRVRIEETEKTKKLVVTPDDGSDETAFPIS
KRARLLVGEGDAVEVGQKLTVGATNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSIHDK
HIEIIIRQMLRRVTIIESGDAELLPGELVERSKFETENRRVVTEGGHPASGRPQLMGITK
ASLATESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRV
EPTEEAKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNQ
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgatgagctccggatcggtctggccaccgctgacgacatc
cgtcagtggagccacggcgaggtcaagaagcccgagaccatcaactaccgcacgctcaag
cccgaaaaggacggactcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggcaagtacaagcgtgtccgcttcaagggcatcatctgtgagcgctgcggcgtc
gaggtcactcgcgccaaggtgcgtcgtgagcggatgggccacatcgagctggccgcgccc
gtcacgcacatctggtacttcaagggcgtcccgtcgcgcctcggctacctcctcgacctc
gcgccgaaggacctcgagaaggtcatctacttcgccgcgtacatgatcacgttcgtggac
gaggagcgccgcacccgcgacctgccctccctggaggcgcatgtctccgtggagcgccag
cagatcgagaaccgccgcgacgccgacctcgaggcccgtgccaagaagctcgagaccgac
ctggccgagctcgaggccgagggcgccaaggccgacgtacgccgcaaggtgcgcgaaggt
gccgagcgcgagatgaagcagctgcgcgaccgtgcgcagcgcgagatcgaccgtctcgac
gaggtgtggaaccgcttcaagaacctcaaggtccaggacctcgagggcgacgagctgctc
taccgcgagctgcgtgaccgcttcggcacgtacttcgacggctcgatgggtgccgcggcg
ctgcagaagcgcctggagtccttcgacctcgacgaggaggccgagcgcctccgcgagatc
atccgcaccggcaagggccagaagaagacccgtgcgctcaagcgcctcaaggtcgtctcc
gcgttcctgcagaccagcaacagccccaagggcatggttctggactgcgtgccggtcatc
ccgccggacctgcgtccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgcgtgatcaaccgcaacaaccgcctgaagcggcttctcgacctc
ggcgcgcccgagatcatcgtgaacaacgagaagcgcatgctccaggaggccgtcgacgcg
ctgttcgacaacggccgtcgtggtcgcccggtcaccggtcccggcaaccgcccgctgaag
tccctgagcgacatgctcaagggcaagcagggtcgattccgtcagaaccttctcggcaag
cgtgtggactactccgcgcgttccgtgatcgtcgtcggtccgcagctgaagctgcaccag
tgcggtctgcccaaggccatggcgcttgagctcttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagagcgccaagcgcatggtcgagcgcggccgc
acggtcgtgtacgacgtgctcgaagaggtcatcgccgagcacccggttctcctgaaccgt
gcgcccacgctgcaccgcctcggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctctccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctcaagccggccgacggccgccccgtcactatgcccacccaggac
atggtgctcggcctcttcttcctcaccacggacgaggaggagcgcgaggtcatcggcgag
ggccggtccttcggttccacggccgaggcgatcatggcgttcgacgccaaggagctctcg
ctccaggcgaaggtcgacatccgcttcccggtgggcaccttcccgccgcgcggctggact
ccgccggtcgacgaggacggcgacgactccgtcggtggcggcgcgtaccagcagggcgac
agcttccggctgcgtacgaccctgggccgcgcgctcttcaacgagctgctgcccgaggac
tacccgttcgtcgactactcggtgggcaagaagcagctctccgagatcgtcaacgacctg
gccgagcgctaccccaaggtcatcgtggcggcgacgctcgacaacctgaaggcggccggc
ttcttctgggcgacccgttccggtgtcaccgtggccatctccgacgtcgtggtccccgag
gccaagaaggcgatcgtcgcgggctacgaggcgcaggacgagaaggtccagaagcagtac
gagcgcggtctgatcaccaaggaagagcgcacgcaggagctcatcgcgatctggaccaag
gcgaccaacgaggttgccgaggcgatgaacgcgaacttccccaagaccaaccccatcttc
atgatggttgactcgggtgcccgaggaaacatgatgcagatgcgtcagatcgccggtatg
cgtggtctggtgtcgaacgccaagaacgagacgatcccgcgcccgatcaaggcttcgttc
cgcgaaggcctgtcggtgctcgagtacttcatctcgactcacggtgctcgtaagggtctt
gcggacacggctctccgtaccgccgactccggttacctcacccgtcgtctggtcgacgtc
tcccaggacgtcatcattcgcgaggaggactgtggcaccgagcgcggtctgaagctgaag
atcgcggtccgcggcgaggacggcgtgctccgcaagacggagaacgtcgagacgtccgtg
tacgcccgcatgctggccgaggacgtcgtcatcgacggcaaggtcatcgcgccggccaac
gtcgacctcggtgacgtgctcatcgacgccctggtcgccaacggcgtcgaggaggtcaag
acccgctcggtcctgacctgtgagtcggccgtcggcacctgcgccttctgctacggccgc
tcgctggccaccggcaagctggtcgacatcggtgaggcggtcggcatcatcgccgcccag
tccatcggtgagcccggcacgcagctgacgatgcgtaccttccacaccggtggtgtggcc
ggtgacgacatcacccagggtctgccccgagtcgtcgagctcttcgaggctcgtacgccc
aagggtgtcgccccgatctcggaggcgaagggtcgcgtccgtatcgaggagaccgagaag
accaagaagctcgtggtcaccccggacgacggcagcgacgagacggcgttcccgatctcg
aagcgtgcccgtctgctcgtgggcgagggcgacgcggtcgaggtgggccagaagctcacc
gtcggtgccaccaacccgcacgacgtgctgcggatcctcggtcagcgcgcggtccaggtc
cacctggtcggcgaagtccagaaggtctacaactcgcagggtgtgtcgatccacgacaag
cacatcgagatcatcatccggcagatgctccgccgcgtgacgatcatcgagtccggcgac
gcggagctgctgccgggcgagctcgtcgagcgctcgaagttcgagaccgagaaccgtcgt
gtggtcaccgagggcggtcaccccgcctccggccgtccgcagctgatgggtatcaccaag
gcctcgctggcgacggagtcgtggctgtccgcggcttccttccaggagacgaccagggtc
ctgacggacgcggcgatcaacgccaagtccgactccctgatcggcctcaaggagaacgtc
atcatcggtaagctcatcccggccggtacgggtctgtcccgctaccgcaacatccgggtc
gagccgaccgaggaggccaaggccgcgatgtactcggccgtcggctacgacgacatcgac
tactcgcccttcgggacgggttcgggtcaggccgtgccgctggaggactacgactacggt
ccctacaaccagtag
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integrated database retrieval system
