Streptomyces aureoverticillatus: G3H79_18970
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Entry
G3H79_18970 CDS
T08343
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
saov
Streptomyces aureoverticillatus
Brite
KEGG Orthology (KO) [BR:
saov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saov03021
]
G3H79_18970
Transcription machinery [BR:
saov03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
G3H79_18970
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
GerE
MarR_2
NirdL-like_HTH
HTH_3
MarR
DUF7343
DUF134
HTH_5
HTH_37
Motif
Other DBs
NCBI-ProteinID:
QIB44852
LinkDB
All DBs
Position
complement(4771398..4772246)
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AA seq
282 aa
AA seq
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MALTVPASSAPEALPAQVTEGPPVKAPSTRGADTRALTQVLFAQLKGLTVGTPEHSRVRG
ALIEANLPLVRYAAARFRSRNEPMEDVVQVGTIGLINAIDRFDPDRGVQFPTFAMPTVVG
EIKRYFRDNVRTVHVPRRLHELWVQVTGATEDLTTAFGRSPTTAEIAERLRITEEEVLSC
IEAGRSYHATSLEAAQEGDGLPGLVDRLGYEDPALDGVEHRDLVRHLLVQLPEREQRILL
LRYYSNLTQSQISAELGVSQMHVSRLLARSFARLRSANRIEA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
gtggcgttgaccgtgccggccagttctgcgcccgaagcactgcccgcccaggtgaccgaa
gggccacccgtgaaggccccgagcacccggggcgccgacacccgcgccctcacccaggtc
ctgttcgcccagctcaaggggctcaccgtgggcacccccgagcacagcagggtgcgcggg
gcgctcatcgaggcgaaccttccgctcgtgcggtacgccgccgcccgcttccgcagccgc
aacgagccgatggaggacgtcgtccaggtcggcaccatcgggctcatcaacgccatcgac
cgcttcgaccccgaccgcggcgtgcagttcccgaccttcgcgatgcccaccgtcgtcggc
gagatcaagcggtacttccgcgacaacgtgcgcaccgtgcacgtaccgaggcggctgcac
gagctgtgggtgcaggtcaccggggcgaccgaggacctcaccacggccttcgggcgctcg
ccgaccaccgccgagatcgccgagcggctgcggatcaccgaggaggaggtgctctcctgc
atcgaggccgggcgttcgtaccacgcgacgtccctggaggccgcgcaggagggcgacggg
ctgcccggcctcgtggaccggctcgggtacgaggacccggccctggacggcgtggagcac
cgcgatctcgtacggcatctgctcgtccaactgcccgagcgggaacagcggatcctgctg
cttcgctactacagcaatctgacccagtcgcagatcagcgcggaattgggcgtttcccag
atgcatgtgtcacgactgctggccagaagcttcgcgcgacttcggtccgcaaatcggatc
gaggcgtaa
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