Streptomyces aureoverticillatus: G3H79_20410
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Entry
G3H79_20410 CDS
T08343
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
saov
Streptomyces aureoverticillatus
Pathway
saov03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
saov00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
G3H79_20410
09124 Replication and repair
03420 Nucleotide excision repair
G3H79_20410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saov03021
]
G3H79_20410
03400 DNA repair and recombination proteins [BR:
saov03400
]
G3H79_20410
Enzymes [BR:
saov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G3H79_20410
Transcription machinery [BR:
saov03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
G3H79_20410
DNA repair and recombination proteins [BR:
saov03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
G3H79_20410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
IMD
ETAA1
Motif
Other DBs
NCBI-ProteinID:
QIB45080
LinkDB
All DBs
Position
complement(5064932..5066575)
Genome browser
AA seq
547 aa
AA seq
DB search
MNGPLIVQSDKTLLLEVDHERADACRRAIAPFAELERAPEHIHTYRVTPLGLWNARAAGH
DAEQVVDALVEFSRYPVPHALLVDVAETMARYGRLTLSKHPVHGLVLTSTDRPVLEEILR
SKKIQPLVGARVDPDTVAVHPSERGQIKQTLLKLGWPAEDLAGYVDGEAHAIELREDGWA
LRPYQRQAVEGFWHGGSGVVVLPCGAGKTLVGAGAMAEAKATTLILVTNTVSARQWKHEL
VKRTSLTEDEIGEYSGTKKEIRPVTIATYQVLTTKRKGIYPHLELFDSRDWGLILYDEVH
LLPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAPA
DCVEVRVNLTDSERLAYATAEAEEKYRFCATTATKRKVTEALVRKHQGEQTLVIGQYIDQ
LDELGEHLDAPVIKGETTNAQREKLFDAFREGEISVLVVSKVANFSIDLPEATVAIQVSG
TFGSRQEEAQRLGRVLRPKADGHEARFYSVVARDTIDQDFAAHRQRFLAEQGYAYRILDA
DAVLAEG
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
gtgaacggaccgctcatcgtccagtcggacaagactctgctgctcgaggtggaccacgag
cgggccgacgcctgccgccgcgccatcgccccgttcgcggagctggagcgtgccccggag
cacatccacacgtaccgcgtcacgccgctcggactgtggaacgcccgtgcggcggggcac
gacgccgagcaggtcgtggacgcgctcgtcgagttctcgcggtatcccgtcccgcacgcg
ctcctcgtcgacgtcgccgagacgatggcccgctacggccgcctcaccctcagcaagcac
cccgtccacggcctcgtcctcaccagcaccgaccgcccggtcctggaggagatcctccgc
tcgaagaagatccagccgctggtcggcgcccgcgtcgacccggacacggtcgccgtgcac
ccctccgagcgcggccagatcaagcagacgctgctgaagctgggctggcccgcagaggac
ctcgcggggtacgtcgacggcgaggcccacgccatcgagctgcgcgaggacggctgggcc
ctgcgcccctaccagcgccaggccgtcgagggcttctggcacggcggcagcggggtcgtc
gtgctgccgtgcggcgcgggcaagacgctggtgggcgccggcgccatggccgaggcgaag
gccacgacgctgatcctcgtcacgaacaccgtctccgcccggcagtggaagcacgagctg
gtcaagcgcacctccctcaccgaggacgagatcggtgagtacagcggtacgaagaaggag
atccggccggtcaccatcgccacgtaccaggtccttaccaccaagcggaagggcatctat
ccgcatctggagctcttcgactcccgcgactggggcctcatcctctacgacgaggtgcac
ctgctgcccgcgcccgtcttcaagttcaccgccgatctgcaggcgcggcggcggctcggt
ctcacggcgacgctggtacgggaggacgggcgcgagtcggacgtcttctcgttgatcggg
cccaagcggttcgacgcgccgtggaaggagatcgaggcccaggggtacatcgcgcccgcc
gactgcgtcgaggtgcgcgtcaatctcaccgactccgagcggctcgcgtacgccaccgcc
gaggccgaggagaagtaccgcttctgcgccaccaccgcgaccaagcggaaggtcaccgag
gcgctggtgcgcaagcatcagggcgagcagacgctcgtcatcgggcagtacatcgaccag
ctcgacgagctgggtgagcatctcgacgcgcccgtcatcaagggggagacgacgaacgcg
cagcgcgagaagctgttcgacgccttccgcgagggcgagatctccgtcctcgtcgtctcc
aaggtcgccaacttctccatcgacctgcccgaggcgaccgtcgccattcaggtgtccggc
acgttcggctcccgccaggaggaggcgcagcggctcgggcgtgtgcttcggccgaaggcc
gacgggcacgaggcccgcttctactccgtggtggcgcgggacaccatcgaccaggacttc
gccgcgcatcggcagcggttcctcgcggagcaggggtacgcgtaccggattctcgacgcg
gacgcggtgctggctgaaggctga
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